BAC Information

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BAC

Clone NameB6Ng01-056K15
Chromosome12 (Build37)
Map Location 74,632,210 - 74,771,036
singlet/doubletdoublet
Overlap geneTmem30b, 2210039B01Rik, Prkch
Upstream gene1810048J11Rik, LOC209183, LOC100041323, Dhrs7, LOC100041157, 5033425G24Rik, Ppm1a, Six6os1, Six6, LOC100041234, Six1, Six4, Mnat1, Trmt5, Slc38a6, EG666356
Downstream geneEG666385, LOC100041489, Hif1a, EG277089, Snapc1, Syt16, 1700086L19Rik, Dbpht2, LOC671971
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056K15.bB6Ng01-056K15.g
ACCDH878754DH878755
length3421,032
definitionDH878754|Mus musculus domesticus DNA, BAC clone: B6Ng01-056K15, 5' end.DH878755|Mus musculus domesticus DNA, BAC clone: B6Ng01-056K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,632,210 - 74,632,551)(74,770,000 - 74,771,036)
sequence
taccactagaaaagaatccagtgggttagaccaagcctctacacttacag
aggaggaagcatagaggagcgaataacttaagtagatcacaccacctccc
atgcaggcggccaccactctgcacctttaacaacaccctatccaaaatca
gctgtgaaactagacatgttgccacagggttgttgtgtgctggtgtctgc
ctggggaaacactatgctgaggagtaggcactagacgaaggagtttagga
aagttacagggcgtatgcacagatgatcagaccctgcagctgtataaagg
aaacaggacagtttcagaagttggggtggggggtgaggggtg
gaattctgttactaggttgggtatattattggtaaccaagaaagatgttt
ctgcggggctctggggaatttagtggtggttctcctaatcaaagggttca
aagcagcgaagccactttgtgtggatttgttccctcggccttaggaatga
agcacttcccatccactgagaatgagacatcagggaaggctgcccaaggg
gggagtaataaagattctatttgctaaagcactgtggggttcagatagcc
tgacaaaaaccctttcaaagaagcccatgtataaggaagaggctggctcc
tatagagggtgaagccacctgcagagattaataaagggtttaaaatccca
acacctcatgtccaagtatggtagacatgagaaggggaaaatggaagaat
ttctgggcaaaccctaaacagggcataggaagctactaggtcctttttag
tttaaacgtagcaggatatttcttgcgcgcgctcgactcgaccagcaaga
acgacgctgcaacaggatccttctgcacacgtttattgggagagcttgat
tgtagaggcgaaaagacttttttgcccagagctggtgctgcttttatagg
cctaggagaggcgtgtctcataccctgattggttatgcactaagcctcat
ttgcatgttcctcatctgattggctactctctctcagtacctcactgagc
ctcattatcatacctcatttgcatgtctcacatccgattggttatactct
cagtaccttacagaacctcattatcatgcctgggccaggcagtgtttttt
gcaaaactttactgcatatgtacacattggttgtttgtccaatcttatgc
atgggggccagcatagtcagtgccactcagcaacggcacatgtggcttcc
cacagatattgggtggactttcctcttgtcccagatcctaagggcccagt
acccactataaagctttctagccttcctcttctgggaactctggagatga
gaacactctaattctgctcctagtccttcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_74632210_74632551
seq2: B6Ng01-056K15.b_53_394

seq1  TACCACTAGAAAAGAATCCAGTGGGTTAGACCAAGCCTCTACACTTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTAGAAAAGAATCCAGTGGGTTAGACCAAGCCTCTACACTTACAG  50

seq1  AGGAGGAAGCATAGAGGAGCGAATAACTTAAGTAGATCACACCACCTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAGCATAGAGGAGCGAATAACTTAAGTAGATCACACCACCTCCC  100

seq1  ATGCAGGCGGCCACCACTCTGCACCTTTAACAACACCCTATCCAAAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGCGGCCACCACTCTGCACCTTTAACAACACCCTATCCAAAATCA  150

seq1  GCTGTGAAACTAGACATGTTGCCACAGGGTTGTTGTGTGCTGGTGTCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAAACTAGACATGTTGCCACAGGGTTGTTGTGTGCTGGTGTCTGC  200

seq1  CTGGGGAAACACTATGCTGAGGAGTAGGCACTAGACGAAGGAGTTTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAAACACTATGCTGAGGAGTAGGCACTAGACGAAGGAGTTTAGGA  250

seq1  AAGTTACAGGGCGTATGCACAGATGATCAGACCCTGCAGCTGTATAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACAGGGCGTATGCACAGATGATCAGACCCTGCAGCTGTATAAAGG  300

seq1  AAACAGGACAGTTTCAGAAGTTGGGGTGGGGGGTGAGGGGTG  342
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGACAGTTTCAGAAGTTGGGGTGGGGGGTGAGGGGTG  342

seq1: chr12_74770000_74771036
seq2: B6Ng01-056K15.g_71_1102 (reverse)

seq1  TCTGAA-GACATGGAGCAGAAATGGAAGTGTTCTCATCTCCAAGAAGTTC  49
      |||||| |||  ||||||||| | | ||||||||||||||||   |||||
seq2  TCTGAAGGACTAGGAGCAGAATTAG-AGTGTTCTCATCTCCA--GAGTTC  47

seq1  CCAGAAGA-GAAGGCTCTGAGAGCTTTATAGTGGGGTACTGGGCCCTAAG  98
      |||||||| |||||||  || ||||||||||| |||||||||||||| ||
seq2  CCAGAAGAGGAAGGCT-AGAAAGCTTTATAGT-GGGTACTGGGCCCTTAG  95

seq1  ATTCTGGGACAAGAGGAAAAGTCCACCCAATATCTGTGGGAAGCCACATG  148
        |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GATCTGGGACAAGAGG-AAAGTCCACCCAATATCTGTGGGAAGCCACATG  144

seq1  TGCCGTTGCTGAGTGGCACTGACTACTGCTGGCCACCATGCATAAGATTG  198
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  TGCCGTTGCTGAGTGGCACTGACTA-TGCTGGCCCCCATGCATAAGATTG  193

seq1  GACAAACAACCAATGTGTACATATGCAGTAAAGTTTTTTGC-AAAAACAC  247
      |||||||||||||||||||||||||||||||||  |||||| ||||||||
seq2  GACAAACAACCAATGTGTACATATGCAGTAAAG--TTTTGCAAAAAACAC  241

seq1  TGCCTGGCCCAGGCATGATAATGAGGTTCTGTAAGGTACTGAGAGTATAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCCCAGGCATGATAATGAGGTTCTGTAAGGTACTGAGAGTATAA  291

seq1  CCAATCGGATGTGAGACATGCAAATGAGGTATGATAATGAGGCTCAGTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCGGATGTGAGACATGCAAATGAGGTATGATAATGAGGCTCAGTGA  341

seq1  GGTACTGAGAGAGAGTAGCCAATCAGATGAGGAACATGCAAATGAGGCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGAGAGAGAGTAGCCAATCAGATGAGGAACATGCAAATGAGGCTT  391

seq1  AGTGCATAACCAATCAGGGTATGAGACACGCCTCTCCTAGGCCTATAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATAACCAATCAGGGTATGAGACACGCCTCTCCTAGGCCTATAAAA  441

seq1  GCAGCACCAGCTCTGGGC-AAAAAGTCTTTTCGCCTCTACAATCAAGCTC  496
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCAGCACCAGCTCTGGGCAAAAAAGTCTTTTCGCCTCTACAATCAAGCTC  491

seq1  TCCCAATAAACGTGTGCAGAAGGATCCTGTTGCAGCGTCGTTCTTGCTGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATAAACGTGTGCAGAAGGATCCTGTTGCAGCGTCGTTCTTGCTGG  541

seq1  TCGAGTCGAGCGCGCGCAAGAAATATCCTGCTACGTTTAAACTAAAAAGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTCGAGCGCGCGCAAGAAATATCCTGCTACGTTTAAACTAAAAAGG  591

seq1  ACCTAGTAGCTTCCTATGCCCTGTTTAGGGTTTGCCCAGAAATTCTTCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTAGCTTCCTATGCCCTGTTTAGGGTTTGCCCAGAAATTCTTCCA  641

seq1  TTTTCCCCTTCTCATGTCTACCATACTTGGACATGAGGTGTTGGGATTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCTTCTCATGTCTACCATACTTGGACATGAGGTGTTGGGATTTT  691

seq1  AAACCCTTTATTAATCTCTGCAGGTGGCTTCACCCTCTATAGGAGCCAGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTTATTAATCTCTGCAGGTGGCTTCACCCTCTATAGGAGCCAGC  741

seq1  CTCTTCCTTATACATGGGCTTCTTTGAAAGGGTTTTTGTCAGGCTATCTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTTATACATGGGCTTCTTTGAAAGGGTTTTTGTCAGGCTATCTG  791

seq1  AACCCCACAGTGCTTTAGCAAATAGAATCTTTATTACTCCCCCCTTGGGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCACAGTGCTTTAGCAAATAGAATCTTTATTACTCCCCCCTTGGGC  841

seq1  AGCCTTCCCTGATGTCTCATTCTCAGTGGATGGGAAGTGCTTCATTCCTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCCCTGATGTCTCATTCTCAGTGGATGGGAAGTGCTTCATTCCTA  891

seq1  AGGCCGAGGGAACAAATCCACACAAAGTGGCTTCGCTGCTTTGAACCCTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGAGGGAACAAATCCACACAAAGTGGCTTCGCTGCTTTGAACCCTT  941

seq1  TGATTAGGAGAACCACCACTAAATTCCCCAGAGCCCCGCAGAAACATCTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGGAGAACCACCACTAAATTCCCCAGAGCCCCGCAGAAACATCTT  991

seq1  TCTTGGTTACCAATAATATACCCAACCTAGTAACAGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTACCAATAATATACCCAACCTAGTAACAGAATTC  1032