BAC Information

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BAC

Clone NameB6Ng01-057G18
Chromosome12 (Build37)
Map Location 41,311,457 - 41,426,184
singlet/doubletdoublet
Overlap geneDock4
Upstream geneLOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820, Zfp277
Downstream geneLOC638487, LOC100043157, LOC100043162, Lrrn3
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057G18.bB6Ng01-057G18.g
ACCDH879294DH879295
length798952
definitionDH879294|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G18, 5' end.DH879295|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,311,457 - 41,312,254)(41,425,226 - 41,426,184)
sequence
gaattcctttaaatgcctgtaacttcctactcagaggaagtttagcaatt
tgatcccttttagttttctattaagatttgttcctcaggtcagagtcaca
tttgcctcaaaaatcccttctctctctagtgcccccatgaatgtggaggt
tcctctttcggccagtgggaaccccgagagctttacttaagaggacacgc
catcacatgtctatagatagactattttccacagaggcaagcctgaaagg
ggaaaggtgaatacagtaagtcagggggtgtggttggactgaattccccc
tctctgcctaataggctctgcaaaccttgagacgactcaaggaagctaga
cagtgtcacccagtgctgattggtcttgcagagagcatggttctttagac
agtggaaggagatccgtccatactgtgcacaccatcagttcgtccccacg
tagatttatggaatttctgtttagcgcataccagtttctagttttcctcc
gtagagctgtaaagagttttgttgttgatgttgtttgtttgtttgcttga
tggttttgcttttattgtgtttgctgtgactcttagccattatttagtgg
cttcttgtctctgtcgctggctgtgatgaaatagtcttgttcatactttg
aaaatgatctttctgttcaaaacagcaagatatgtgcttgtagaaaaata
acctccatttctgagttatgggttttgtggaccatatgtaccaaccactg
cctgatcagggaagtgggacaagggtcactgaatgatgtctaaacatg
gaattctgcctccattagtctgtgaactaaatctagagtggacaatataa
acccctgggactctagttcctgggttataaaaatagtagggaagtaaagg
cacaggtgaagagaagaaaggcattagacagcatactttaaaacttcaat
ttcacattattaattatgattattattaatagtagttgtagtatcattag
ttgggaagggccgtgccatgctgcacatgtggagttcagaggacaatctt
ctggatgctttctgtctttctacctttacatggattataagggtgaaatt
caggttattagtctttatgtaagcactgttcccttctgggccatcttgct
ggcccctacaatacctttgttataatgttgtttctatgacttataaaaga
acatctagaatagagtacatccatactttagcagatcaagccggtcaaaa
gtcttgcatggatggggacttcactctgttgtattggaggaactgtttgc
agttaatggctgttgagagaggaagggtcactttcctttgtggctgtggc
tcctgataggctgtttatgccccagtggatgaccctgctcccacatgtat
atgggcagcatgaactggatcaagggtttatcaatcaaaactaaaaataa
aaacagaaatgaagttggaaggtgagcagggtagagacactacagggagt
aaagagaaaagtagtaggagagatgtgatcaatatacattatagaaatgt
ttaacactttgaaagaacaaatatcactattttttttaaaaaggaaaaac
cttatacacacgctttaatattctgctcctaaactgttcccattcctgtg
acacctcctcccatcttttgcgaatcctttagattaatgagatcctctgc
aaataatccttgatgagaaggcagcttcttctggtggatttacaatgcct
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_41311457_41312254
seq2: B6Ng01-057G18.b_46_843

seq1  GAATTCCTTTAAATGCCTGTAACTTCCTACTCAGAGGAAGTTTAGCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAAATGCCTGTAACTTCCTACTCAGAGGAAGTTTAGCAATT  50

seq1  TGATCCCTTTTAGTTTTCTATTAAGATTTGTTCCTCAGGTCAGAGTCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCTTTTAGTTTTCTATTAAGATTTGTTCCTCAGGTCAGAGTCACA  100

seq1  TTTGCCTCAAAAATCCCTTCTCTCTCTAGTGCCCCCATGAATGTGGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCAAAAATCCCTTCTCTCTCTAGTGCCCCCATGAATGTGGAGGT  150

seq1  TCCTCTTTCGGCCAGTGGGAACCCCGAGAGCTTTACTTAAGAGGACACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTCGGCCAGTGGGAACCCCGAGAGCTTTACTTAAGAGGACACGC  200

seq1  CATCACATGTCTATAGATAGACTATTTTCCACAGAGGCAAGCCTGAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACATGTCTATAGATAGACTATTTTCCACAGAGGCAAGCCTGAAAGG  250

seq1  GGAAAGGTGAATACAGTAAGTCAGGGGGTGTGGTTGGACTGAATTCCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGTGAATACAGTAAGTCAGGGGGTGTGGTTGGACTGAATTCCCCC  300

seq1  TCTCTGCCTAATAGGCTCTGCAAACCTTGAGACGACTCAAGGAAGCTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCTAATAGGCTCTGCAAACCTTGAGACGACTCAAGGAAGCTAGA  350

seq1  CAGTGTCACCCAGTGCTGATTGGTCTTGCAGAGAGCATGGTTCTTTAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCACCCAGTGCTGATTGGTCTTGCAGAGAGCATGGTTCTTTAGAC  400

seq1  AGTGGAAGGAGATCCGTCCATACTGTGCACACCATCAGTTCGTCCCCACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGGAGATCCGTCCATACTGTGCACACCATCAGTTCGTCCCCACG  450

seq1  TAGATTTATGGAATTTCTGTTTAGCGCATACCAGTTTCTAGTTTTCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTATGGAATTTCTGTTTAGCGCATACCAGTTTCTAGTTTTCCTCC  500

seq1  GTAGAGCTGTAAAGAGTTTTGTTGTTGATGTTGTTTGTTTGTTTGCTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCTGTAAAGAGTTTTGTTGTTGATGTTGTTTGTTTGTTTGCTTGA  550

seq1  TGGTTTTGCTTTTATTGTGTTTGCTGTGACTCTTAGCCATTATTTAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTGCTTTTATTGTGTTTGCTGTGACTCTTAGCCATTATTTAGTGG  600

seq1  CTTCTTGTCTCTGTCGCTGGCTGTGATGAAATAGTCTTGTTCATACTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGTCTCTGTCGCTGGCTGTGATGAAATAGTCTTGTTCATACTTTG  650

seq1  AAAATGATCTTTCTGTTCAAAACAGCAAGATATGTGCTTGTAG-AAAATA  699
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAATGATCTTTCTGTTCAAAACAGCAAGATATGTGCTTGTAGAAAAATA  700

seq1  ACCTCCATTTCTGAGTTATGGGTTTTGTGGACCATATGTACCAACCACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATTTCTGAGTTATGGGTTTTGTGGACCATATGTACCAACCACTG  750

seq1  CCTGATCAGGGAAGTGGGACAAGGGTCACTGAAGTGATGTCTAAACATG  798
      ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTGATCAGGGAAGTGGGACAAGGGTCACTGAA-TGATGTCTAAACATG  798

seq1: chr12_41425226_41426184
seq2: B6Ng01-057G18.g_70_1021 (reverse)

seq1  AGAGGCATATGTAGAATGCCACCAGAAGAAGCTGCCTTCTCATCAAGGGT  50
      |||||||| |||| ||| |||||||||||||||||||||||||||||| |
seq2  AGAGGCAT-TGTA-AAT-CCACCAGAAGAAGCTGCCTTCTCATCAAGGAT  47

seq1  TAGTTTTGCAGAGGAATCTCATTTAATCTAAAGGATTCGCAAAAGATGGG  100
      ||  |||||||||| |||||| ||||||||||||||||||||||||||||
seq2  TA--TTTGCAGAGG-ATCTCA-TTAATCTAAAGGATTCGCAAAAGATGGG  93

seq1  AGGAGGGTGTCACAGGAATGGGAACAGTTTAGGAGCAGAATATTAAAGCG  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGA-GGTGTCACAGGAATGGGAACAGTTTAGGAGCAGAATATTAAAGCG  142

seq1  TGTGTATAAGGTTTTTCCTTTTTAAAAAAAATAGTGATATTTGTTCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATAAGGTTTTTCCTTTTTAAAAAAAATAGTGATATTTGTTCTTTC  192

seq1  AAAGTGTTAAACATTTCTATAATGTATATTGATCACATCTCTCCTACTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTAAACATTTCTATAATGTATATTGATCACATCTCTCCTACTAC  242

seq1  TTTTCTC-TTACTCCCTGTAGTGTCTCTACCCTGCTCACCTTCCAACTTC  299
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTTACTCCCTGTAGTGTCTCTACCCTGCTCACCTTCCAACTTC  292

seq1  ATTTCTGTTTTTATTTTTAGTTTTGATTGATAAACCCTTGATCCAGTTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTTTTTATTTTTAGTTTTGATTGATAAACCCTTGATCCAGTTCA  342

seq1  TGCTGCCCATATACATGTGGGAGCAGGGTCATCCACTGGGGCATAAACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCCATATACATGTGGGAGCAGGGTCATCCACTGGGGCATAAACAG  392

seq1  CCTATCAGGAGCCACAGCCACAAAGGAAAGTGACCCTTCCTCTCTCAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCAGGAGCCACAGCCACAAAGGAAAGTGACCCTTCCTCTCTCAACA  442

seq1  GCCATTAACTGCAAACAGTTCCTCCAATACAACAGAGTGAAGTCCCCATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTAACTGCAAACAGTTCCTCCAATACAACAGAGTGAAGTCCCCATC  492

seq1  CATGCAAGACTTTTGACCGGCTTGATCTGCTAAAGTATGGATGTACTCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAGACTTTTGACCGGCTTGATCTGCTAAAGTATGGATGTACTCTA  542

seq1  TTCTAGATGTTCTTTTATAAGTCATAGAAACAACATTATAACAAAGGTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATGTTCTTTTATAAGTCATAGAAACAACATTATAACAAAGGTAT  592

seq1  TGTAGGGGCCAGCAAGATGGCCCAGAAGGGAACAGTGCTTACATAAAGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGGCCAGCAAGATGGCCCAGAAGGGAACAGTGCTTACATAAAGAC  642

seq1  TAATAACCTGAATTTCACCCTTATAATCCATGTAAAGGTAGAAAGACAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACCTGAATTTCACCCTTATAATCCATGTAAAGGTAGAAAGACAGA  692

seq1  AAGCATCCAGAAGATTGTCCTCTGAACTCCACATGTGCAGCATGGCACGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCCAGAAGATTGTCCTCTGAACTCCACATGTGCAGCATGGCACGG  742

seq1  CCCTTCCCAACTAATGATACTACAACTACTATTAATAATAATCATAATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCAACTAATGATACTACAACTACTATTAATAATAATCATAATTA  792

seq1  ATAATGTGAAATTGAAGTTTTAAAGTATGCTGTCTAATGCCTTTCTTCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGAAATTGAAGTTTTAAAGTATGCTGTCTAATGCCTTTCTTCTC  842

seq1  TTCACCTGTGCCTTTACTTCCCTACTATTTTTATAACCCAGGAACTAGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTGTGCCTTTACTTCCCTACTATTTTTATAACCCAGGAACTAGAG  892

seq1  TCCCAGGGGTTTATATTGTCCACTCTAGATTTAGTTCACAGACTAATGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGGTTTATATTGTCCACTCTAGATTTAGTTCACAGACTAATGGA  942

seq1  GGCAGAATTC  959
      ||||||||||
seq2  GGCAGAATTC  952