BAC Information

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BAC

Clone NameB6Ng01-060J06
Chromosome12 (Build37)
Map Location 98,354,951 - 98,493,819
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039664, EG628277
Downstream geneLOC382626, LOC100039743, LOC667732, LOC628351, LOC100039770, LOC667746, Galc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060J06.bB6Ng01-060J06.g
ACCDH881515DH881516
length1,193980
definitionDH881515|Mus musculus domesticus DNA, BAC clone: B6Ng01-060J06, 5' end.DH881516|Mus musculus domesticus DNA, BAC clone: B6Ng01-060J06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,354,951 - 98,355,897)(98,492,830 - 98,493,819)
sequence
gaattcaagagagagacaaatttctctaggaagaggaaatagaatagaaa
atcatgggtggacaaattggggagggttactgcaactggaggatcaaatg
aggaggaaaacagatgatcaggagaaagattgggatagcagaagaacagc
taaaattatgggtaatttgaggggttgcatggaaacttgctacagtatac
gcttcctaaattatgtacatatctcaagagtatttaaatgaaatctacaa
ataatagaggaggcagagacaatgctaaacatctttcatcagtaaataaa
gcttacagaatgaggaatgggtcacatctaatcaagttgttggtcaaagg
gttttcaagacaatttccaaacactttgcaaaggctacatgtttctattt
gcaaactgatggcagggccctactgctgaaaataacatctagttgtcatt
ggacatggagaagtcaaacaggtactggtacagagctttcaaacctattg
aattgtgttctccttacaggaagatattctgcatgctatcaaataaaaga
aacataaacctgaagtcagctacaaagccgtcaatccacaatagtgtcct
gacagtaagatgcactagtgcaatgctgacccaaatcttgtggtaacacc
aatctctgatttaactaagtcccactccatgagatggaacacatatccat
caagaaacagagacaaagtagtccagagactcagaggaagtccaaatgtg
actttcttcaaagtagcaatgcacagatagtcaaagctatctgattaaga
agagagcattgagaagagatcaaagaagttgatcctaatgtattaaacaa
tatgaagcatctgatcaaccatttcaggagactgttaaaaatcatttaga
aaaagaaaatcagaaagcttcgtggtggaacaaatgaaaagagagcaatc
aagggctcctataaggactggaaagtgttcattgcagttttctgcctcag
ccaaatcagtttagtaggaagtaaaggtcaacccagagggtaggtgctta
gtatgacgatttcatgaattgttcagggatcttgtatttgtggccttttt
aagtcgcctcagtcaaatatcatggaaattgaactattctatgtaataaa
tggaatgattgagaggaggttccaggtagatctggcttcactt
gaattctatgtctggacttaattaagtttttgttgttttgttttgtttaa
tttcacagccactagcgttcacttagcttcattagaaatttagggaaaga
cactaaaataaagctattttttctatgtggctcagtgtggcatgtagtat
gactaacaaccataaaggatgacaaaataatccttcctgctaattcatat
ttttaaaaaacatgttttgtttaaatatgtttattgaactactaaggcta
cttgggcttaccttggaaaagttagcattaaataatttacatgaccattt
gggcaacttatagatagatggctaagatgcctaaggatgagaaaaccttg
caacactagctgtggaatgagagaagggttgcatgatattaaggtactat
acctaccatgtggccttaattctggctcagatccatgacctagatgaagt
ccctaaaccactttgagctttaattttaaaatctcacttcctttttcttc
tatgtctagaaatatttagaataaatttttatccccctcttggcccctct
atgattcgtagcacttgttgatttctgcagtatcatccactcatcatagg
gacctaactgaaataatggagataatgaatgtgaggttaggatgacaata
ccactggcccaggggaggtatgagtagtctctagcctgggtctggctata
ggccacttgtatatgtatgatgaatcaaagagaatttgatttagtcacgc
taaaggaggagcagaaatttatgaaactgtcttgcaacagtaatgagaat
taaaagttcagatcatgagaaagtctccaagaggagacagtgcataatct
gtttttcaggcaggatgatagttgtgcatccatcctgagctcagagtaat
gctatggtaaagtaaaatgaatccataagaacattcgcaaactaggcagt
ctctagggatagcacatcctggtttttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98354951_98355897
seq2: B6Ng01-060J06.b_318_1237

seq1  GCTAAACATCTTTCATCAGTAAATAAAGCTTACAGAATGAGGAATGGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACATCTTTCATCAGTAAATAAAGCTTACAGAATGAGGAATGGGTC  50

seq1  ACATCTAATCAAGTTGTTGGTCAAAGGGTTTTCAAGACAATTTCCAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAATCAAGTTGTTGGTCAAAGGGTTTTCAAGACAATTTCCAAACA  100

seq1  CTTTGCAAAGGCTACATGTTTCTATTTGCAAACTGATGGCAGGGCCCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAAAGGCTACATGTTTCTATTTGCAAACTGATGGCAGGGCCCTAC  150

seq1  TGCTGAAAATAACATCTAGTTGTCATTGGACATGGAGAAGTCAAACAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAATAACATCTAGTTGTCATTGGACATGGAGAAGTCAAACAGGT  200

seq1  ACTGGTACAGAGCTTTCAAACCTATTGAATTGTGTTCTCCTTACAGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTACAGAGCTTTCAAACCTATTGAATTGTGTTCTCCTTACAGGAAG  250

seq1  ATATTCTGCATGCTATCAAATAAAAGAAACATAAACCTGAAGTCAGCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGCATGCTATCAAATAAAAGAAACATAAACCTGAAGTCAGCTAC  300

seq1  AAAGCCGTCAATCCACAATAGTGTCCTGACAGTAAGATGCACTAGTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCGTCAATCCACAATAGTGTCCTGACAGTAAGATGCACTAGTGCAA  350

seq1  TGCTGACCCAAATCTTGTGGTAACACCAATCTCTGATTTAACTAAGTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACCCAAATCTTGTGGTAACACCAATCTCTGATTTAACTAAGTCCC  400

seq1  ACTCCATGAGATGGAACACATATCCATCAAGAAACAGAGACAAAGTAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATGAGATGGAACACATATCCATCAAGAAACAGAGACAAAGTAGTC  450

seq1  CAGAGACTCAGAGGAAGTCCAAATGTGACTTTCTTCAAAGTAGCAATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTCAGAGGAAGTCCAAATGTGACTTTCTTCAAAGTAGCAATGCA  500

seq1  CAGATAGTCAAAGCTATCTGATTAAGAAGAGAGCATTGAGAAGAGATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGTCAAAGCTATCTGATTAAGAAGAGAGCATTGAGAAGAGATCAA  550

seq1  AGAAGTTGATCCTAATGTATTAAACAATATGAAGCATCTGATCAACCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGATCCTAATGTATTAAACAATATGAAGCATCTGATCAACCATT  600

seq1  TCAGGAGACTGTTAAAAATCATTTAGAAAAAGAAAAATCAGAAAGCTTCG  650
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCAGGAGACTGTTAAAAATCATTTAGAAAAAG-AAAATCAGAAAGCTTCG  649

seq1  TGGTGGAACAAATGAAAAAGAGAGCAATCAAGGGCTCCTATAAAGGACTG  700
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  TGGTGGAACAAATG-AAAAGAGAGCAATCAAGGGCTCCTAT-AAGGACTG  697

seq1  GAAAGTGTTCATTGCAGTTCTCTGCCTCAGCCAAAATCAGTTTAGTAGGG  750
      ||||||||||||||||||| |||||||||||| |||||||||||||| ||
seq2  GAAAGTGTTCATTGCAGTTTTCTGCCTCAGCC-AAATCAGTTTAGTA-GG  745

seq1  AAGTAAAGGTCAACCCAGAGGGTAGGTGCTTAGTATGACGATTTCATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGGTCAACCCAGAGGGTAGGTGCTTAGTATGACGATTTCATGAA  795

seq1  TTGTTCAAGGGATCCTTTGTATTTGTGGCCTTTTCTAAAGTCCGCCTCAG  850
      |||||| |||||||  |||||||||||||||||  | |||| ||||||||
seq2  TTGTTC-AGGGATC--TTGTATTTGTGGCCTTT--TTAAGT-CGCCTCAG  839

seq1  TCAAATAATTCATGGGATAATGAACTAATCTATGTTAAAAATTAATATTG  900
      |||||||  |||| ||| | ||||||| ||||||| | |||       ||
seq2  TCAAATA--TCAT-GGAAATTGAACTATTCTATGTAATAAA-------TG  879

seq1  GATATGATGGAGAGAGGGTTCCACAGTTAGGATCACTGGCTTCACTT  947
      || ||||| |||||  |||||  ||| || |||  ||||||||||||
seq2  GA-ATGATTGAGAGGAGGTTC--CAGGTA-GAT--CTGGCTTCACTT  920

seq1: chr12_98492830_98493819
seq2: B6Ng01-060J06.g_68_1047 (reverse)

seq1  TATAAAAACCAGGAATTGTGCTTATCCCTAGAGACTGCCTAGATTTTGCG  50
      ||||||||||||||  ||||| ||||||||||||||||||||  ||||||
seq2  TATAAAAACCAGGA--TGTGC-TATCCCTAGAGACTGCCTAG--TTTGCG  45

seq1  AATGTTCTTATGGATTCATTTTTTACTTTACCATAAGCATTACTCTGAGC  100
      ||||||||||||||||||  |||||||||||||| |||||||||||||||
seq2  AATGTTCTTATGGATTCA--TTTTACTTTACCAT-AGCATTACTCTGAGC  92

seq1  TCAGGATGGATGCACAACTATCATCTTGCCTGAAAAACAGATTATGCACT  150
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCAGGATGGATGCACAACTATCATCCTGCCTGAAAAACAGATTATGCACT  142

seq1  GTCTCCTCTTTGGAGACTTTCTCATGATCTGAACTTTTAATTTCTCATTA  200
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  GTCTCCTC-TTGGAGACTTTCTCATGATCTGAACTTTTAA-TTCTCATTA  190

seq1  CTGTTGCAAGACAGTTTCATAAATTTCTGCTCCTCCTTTAGCGTGACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCAAGACAGTTTCATAAATTTCTGCTCCTCCTTTAGCGTGACTAA  240

seq1  ATCAAATTCTCTTTGATTCATCATACATATACAAGTGGCCTATAGCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTCTCTTTGATTCATCATACATATACAAGTGGCCTATAGCCAGA  290

seq1  CCCAGGCTAGAGACTACTCATACCTCCCCTGGGCCAGTGGTATTGTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTAGAGACTACTCATACCTCCCCTGGGCCAGTGGTATTGTCATC  340

seq1  CTAACCTCACATTCATTATCTCCATTATTTCAGTTAGGTCCCTATGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTCACATTCATTATCTCCATTATTTCAGTTAGGTCCCTATGATGA  390

seq1  GTGGATGATACTGCAGAAATCAACAAGTGCTACGAATCATAGAGGGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGATACTGCAGAAATCAACAAGTGCTACGAATCATAGAGGGGCCA  440

seq1  AGAGGGGGATAAAAATTTATTCTAAATATTTCTAGACATAGAAGAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGGATAAAAATTTATTCTAAATATTTCTAGACATAGAAGAAAAAG  490

seq1  GAAGTGAGATTTTAAAATTAAAGCTCAAAGTGGTTTAGGGACTTCATCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAGATTTTAAAATTAAAGCTCAAAGTGGTTTAGGGACTTCATCTA  540

seq1  GGTCATGGATCTGAGCCAGAATTAAGGCCACATGGTAGGTATAGTACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGATCTGAGCCAGAATTAAGGCCACATGGTAGGTATAGTACCTT  590

seq1  AATATCATGCAACCCTTCTCTCATTCCACAGCTAGTGTTGCAAGGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCATGCAACCCTTCTCTCATTCCACAGCTAGTGTTGCAAGGTTTTC  640

seq1  TCATCCTTAGGCATCTTAGCCATCTATCTATAAGTTGCCCAAATGGTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTAGGCATCTTAGCCATCTATCTATAAGTTGCCCAAATGGTCAT  690

seq1  GTAAATTATTTAATGCTAACTTTTCCAAGGTAAGCCCAAGTAGCCTTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTATTTAATGCTAACTTTTCCAAGGTAAGCCCAAGTAGCCTTAGT  740

seq1  AGTTCAATAAACATATTTAAACAAAACATGTTTTTTAAAAATATGAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAATAAACATATTTAAACAAAACATGTTTTTTAAAAATATGAATTA  790

seq1  GCAGGAAGGATTATTTTGTCATCCTTTATGGTTGTTAGTCATACTACATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGGATTATTTTGTCATCCTTTATGGTTGTTAGTCATACTACATG  840

seq1  CCACACTGAGCCACATAGAAAAAATAGCTTTATTTTAGTGTCTTTCCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTGAGCCACATAGAAAAAATAGCTTTATTTTAGTGTCTTTCCCTA  890

seq1  AATTTCTAATGAAGCTAAGTGAACGCTAGTGGCTGTGAAATTAAACAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTAATGAAGCTAAGTGAACGCTAGTGGCTGTGAAATTAAACAAAA  940

seq1  CAAAACAACAAAAACTTAATTAAGTCCAGACATAGAATTC  990
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAACAAAAACTTAATTAAGTCCAGACATAGAATTC  980