BAC Information

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BAC

Clone NameB6Ng01-060N21
Chromosome12 (Build37)
Map Location 65,312,863 - 65,445,429
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC435302
Downstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060N21.bB6Ng01-060N21.g
ACCDH881720DH881721
length9251,108
definitionDH881720|Mus musculus domesticus DNA, BAC clone: B6Ng01-060N21, 5' end.DH881721|Mus musculus domesticus DNA, BAC clone: B6Ng01-060N21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,312,863 - 65,313,561)(65,444,310 - 65,445,429)
sequence
gaattccagaagtgcacattcctggttataaacctcttctcgttctaata
acttgacatatggctttctgttataataccagaaagtggaaaattatgtt
tttataaagttttatatatatatatatatatatatatatatatatatata
tagtcaaatggtaataggtaagtttttactagggaatattaattgtacta
agattttttttttgtcttgtcttgttttgtttttttaaattatctttaat
tttgtttaaacagtccagttgttacccctctcctgcattgccctccaaaa
gtcctaatcccattcctcatccccatctccaagaggacattcccatcccc
caccaactgtcaggcctccccacgccctggggcctcaagtctctcaaggg
ttaggtgcatcttctctcactgaggtcagaccaggcagtcctctgctgta
tatgtgtcaggagcttcatatcagttggtgtatgctgtctggttggttcc
tcagtgtctgagagatctcttgggtccaggttagctgaaacttctagtct
tcctatggggtctccctcctcctcaacttctttcagactttccctaattc
aaccacaggggtccccgacttcagtccattggttgtgtgtaagtatcttc
ttctgtctaggtcagctgcttgttgggcctctcagaggacaaccttggca
gacttctatctataagcacaccgtagtgttagtaatagcgttaagccatg
aaacctctcccttgagatggatcacaagttgggctggtaaccagatctcc
tatctctcagtctcttctccatttttgtccctgaagttcttttacacaga
aacatttctgggtcagagtttttgactatgggatgacaaccccattcgtc
cactctttgtggatgccctatttat
gaattcctccttgtttcaaatatcaatgcttaattaatttcctctgctgc
tatttaaagtgggatctgtcctcaatggatacactgttgtataaccagtg
tgtttacttttattccagttagtttactatgactatgtcagtgtttctta
tggcaatggccattaagtgtctttgacagttggactagagttctctcttc
tccaaatatcttctttcatttactttagcttatcagacagacctgaactt
tcaacataggcacttttcctttggggttgttaaatagactctctatattc
tcaaatgccaagtgcttttgtaataaggattctttatgctttttgtcttg
aatttacagatattaatgaaattctaaaatttcattactacacagaaaaa
tgacttggtttgggaacagaatattaatcaccccagctaacttttaaaca
tttcaaaacttatctattttaaacttatggttgaatgttttggccttgga
gctgttctattttggcttaaagccaaatatttagacacactgaaaggtaa
ccccattatgaatctctagtttaattagctgtttttaaacagaaggagag
caaaaagtcacttagtatcctttgtgagaacagcagataagctttattta
tgagctgcgttttggaagtgtattctggaagtgtattctggataacttcg
gccaataactttaatctctctctctctgtattataatttctaaaatgcaa
ttttattcatcttcttttagaaaataaataagacctgagtcaatttacag
aatggttagttttcaagatttcttcatattaatacttttgtaaaagtgtt
gtattcttctgggaaggtattgtatgctttgttgaacatttcagctggag
attaagataaagtgctattgcttttcttgttgttataagtgttgcaactg
agctatagcctcattcaagaaaatatattatgataatatttatggttggt
tttaatttaattttattgtaatcacttttagactctatatcattccttgc
ccctcccaatctacctctgactgctccacattccacactccttcccactt
acccgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_65312863_65313561
seq2: B6Ng01-060N21.b_47_749

seq1  GAATTCCAGAAGTGCACATTCCTGGTTATAAACCTCTTCTCGTTCTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAGTGCACATTCCTGGTTATAAACCTCTTCTCGTTCTAATA  50

seq1  ACTTGACATATGGCTTTCTGTTATAATACCAGAAAGTGGAAAATTATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACATATGGCTTTCTGTTATAATACCAGAAAGTGGAAAATTATGTT  100

seq1  TTTATAAAGTTT----TATATATATATATATATATATATATATATATATA  146
      ||||||||||||    ||||||||||||||||||||||||||||||||||
seq2  TTTATAAAGTTTTATATATATATATATATATATATATATATATATATATA  150

seq1  TAGTCAAATGGTAATAGGTAAGTTTTTACTAGGGAATATTAATTGTACTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAATGGTAATAGGTAAGTTTTTACTAGGGAATATTAATTGTACTA  200

seq1  AGATTTTTTTTTTGTCTTGTCTTGTTTTGTTTTTTTAAATTATCTTTAAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTTTTGTCTTGTCTTGTTTTGTTTTTTTAAATTATCTTTAAT  250

seq1  TTTGTTTAAACAGTCCAGTTGTTACCCCTCTCCTGCATTGCCCTCCAAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAAACAGTCCAGTTGTTACCCCTCTCCTGCATTGCCCTCCAAAA  300

seq1  GTCCTAATCCCATTCCTCATCCCCATCTCCAAGAGGACATTCCCATCCCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAATCCCATTCCTCATCCCCATCTCCAAGAGGACATTCCCATCCCC  350

seq1  CACCAACTGTCAGGCCTCCCCACGCCCTGGGGCCTCAAGTCTCTCAAGGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACTGTCAGGCCTCCCCACGCCCTGGGGCCTCAAGTCTCTCAAGGG  400

seq1  TTAGGTGCATCTTCTCTCACTGAGGTCAGACCAGGCAGTCCTCTGCTGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGCATCTTCTCTCACTGAGGTCAGACCAGGCAGTCCTCTGCTGTA  450

seq1  TATGTGTCAGGAGCTTCATATCAGTTGGTGTATGCTGTCTGGTTGGTTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTCAGGAGCTTCATATCAGTTGGTGTATGCTGTCTGGTTGGTTCC  500

seq1  TCAGTGTCTGAGAGATCTCTTGGGTCCAGGTTAGCTGAAACTTCTAGTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTCTGAGAGATCTCTTGGGTCCAGGTTAGCTGAAACTTCTAGTCT  550

seq1  TCCTATGGGGTCTCCCTCCTCCTCAACTTCTTTCAGACTTTCCCTAATTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGGGGTCTCCCTCCTCCTCAACTTCTTTCAGACTTTCCCTAATTC  600

seq1  AACCACAGGGGTCCCCGACTTCAGTCCATTGGTTGTGTGTAAGTATCTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAGGGGTCCCCGACTTCAGTCCATTGGTTGTGTGTAAGTATCTTC  650

seq1  TTCTGTCTAGGTCAGCTGCTTGTTGGGCCTCTCAGAGGACAACCTTGGCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTAGGTCAGCTGCTTGTTGGGCCTCTCAGAGGACAACCTTGGCA  700

seq1  GAC  699
      |||
seq2  GAC  703

seq1: chr12_65444310_65445429
seq2: B6Ng01-060N21.g_66_1173 (reverse)

seq1  AGACGGGGTAGGTGGGGAGGAGGTGTGGGATGTGGAGCAGTCAGAGGGTA  50
      |||| ||||| ||||| |||| |||||| |||||||||||||||| ||||
seq2  AGAC-GGGTAAGTGGGAAGGA-GTGTGGAATGTGGAGCAGTCAGA-GGTA  47

seq1  GATGTGGAGGGGCAAGGAATGGAATATAGAGTCTAAAAAGTGAATTACAA  100
      |||  ||||||||||||||||  ||||||||||| ||||||| ||||| |
seq2  GATTGGGAGGGGCAAGGAATG--ATATAGAGTCT-AAAAGTG-ATTAC-A  92

seq1  ATAAAATTAAATTAAAAACAAACATAAAATATTATCAATAATATTATTTT  150
      ||||||||||||||||| ||| ||| |||||||||| |||||| ||||||
seq2  ATAAAATTAAATTAAAACCAACCAT-AAATATTATC-ATAATA-TATTTT  139

seq1  CTTGAATGAGGCTATAGCTCAGTTTGCAACACTTATAACAACAAG-AAAG  199
      |||||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  CTTGAATGAGGCTATAGCTCAG-TTGCAACACTTATAACAACAAGAAAAG  188

seq1  CAATAGCACTTTATTCTTAATCTCCAGCTGAAATGTTCAACAAAGCATAC  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAATAGCACTTTA-TCTTAATCTCCAGCTGAAATGTTCAACAAAGCATAC  237

seq1  AATACCTTCCCAGAAGAATACAACACTTTTACAAAAGTATTAATATGAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTTCCCAGAAGAATACAACACTTTTACAAAAGTATTAATATGAAG  287

seq1  AAATCTTGAAAACTAACCATTCTGTAAATTGACTCAGGTCTTATTTATTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGAAAACTAACCATTCTGTAAATTGACTCAGGTCTTATTTATTT  337

seq1  TCTAAAAGAAGATGAATAAAATTGCATTTTAGAAATTATAATACAGAGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGAAGATGAATAAAATTGCATTTTAGAAATTATAATACAGAGAG  387

seq1  AGAGAGATTAAAGTTATTGGCCGAAGTTATCCAGAATACACTTCCAGAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATTAAAGTTATTGGCCGAAGTTATCCAGAATACACTTCCAGAAT  437

seq1  ACACTTCCAAAACGCAGCTCATAAATAAAGCTTATCTGCTGTTCTCACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCAAAACGCAGCTCATAAATAAAGCTTATCTGCTGTTCTCACAA  487

seq1  AGGATACTAAGTGACTTTTTGCTCTCCTTCTGTTTAAAAACAGCTAATTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACTAAGTGACTTTTTGCTCTCCTTCTGTTTAAAAACAGCTAATTA  537

seq1  AACTAGAGATTCATAATGGGGTTACCTTTCAGTGTGTCTAAATATTTGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGATTCATAATGGGGTTACCTTTCAGTGTGTCTAAATATTTGGC  587

seq1  TTTAAGCCAAAATAGAACAGCTCCAAGGCCAAAACATTCAACCATAAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCCAAAATAGAACAGCTCCAAGGCCAAAACATTCAACCATAAGTT  637

seq1  TAAAATAGATAAGTTTTGAAATGTTTAAAAGTTAGCTGGGGTGATTAATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGATAAGTTTTGAAATGTTTAAAAGTTAGCTGGGGTGATTAATA  687

seq1  TTCTGTTCCCAAACCAAGTCATTTTTCTGTGTAGTAATGAAATTTTAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCCCAAACCAAGTCATTTTTCTGTGTAGTAATGAAATTTTAGAA  737

seq1  TTTCATTAATATCTGTAAATTCAAGACAAAAAGCATAAAGAATCCTTATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTAATATCTGTAAATTCAAGACAAAAAGCATAAAGAATCCTTATT  787

seq1  ACAAAAGCACTTGGCATTTGAGAATATAGAGAGTCTATTTAACAACCCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCACTTGGCATTTGAGAATATAGAGAGTCTATTTAACAACCCCA  837

seq1  AAGGAAAAGTGCCTATGTTGAAAGTTCAGGTCTGTCTGATAAGCTAAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAGTGCCTATGTTGAAAGTTCAGGTCTGTCTGATAAGCTAAAGT  887

seq1  AAATGAAAGAAGATATTTGGAGAAGAGAGAACTCTAGTCCAACTGTCAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAGAAGATATTTGGAGAAGAGAGAACTCTAGTCCAACTGTCAAA  937

seq1  GACACTTAATGGCCATTGCCATAAGAAACACTGACATAGTCATAGTAAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTAATGGCCATTGCCATAAGAAACACTGACATAGTCATAGTAAAC  987

seq1  TAACTGGAATAAAAGTAAACACACTGGTTATACAACAGTGTATCCATTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGAATAAAAGTAAACACACTGGTTATACAACAGTGTATCCATTGA  1037

seq1  GGACAGATCCCACTTTAAATAGCAGCAGAGGAAATTAATTAAGCATTGAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGATCCCACTTTAAATAGCAGCAGAGGAAATTAATTAAGCATTGAT  1087

seq1  ATTTGAAACAAGGAGGAATTC  1120
      |||||||||||||||||||||
seq2  ATTTGAAACAAGGAGGAATTC  1108