BAC Information

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BAC

Clone NameB6Ng01-062M16
Chromosome12 (Build37)
Map Location 31,228,592 - 31,361,975
singlet/doubletdoublet
Overlap geneTmem18
Upstream geneMyt1l, LOC100043496, Pxdn, Tpo, Sntg2
Downstream geneLOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062M16.bB6Ng01-062M16.g
ACCDH883080DH883081
length1,094229
definitionDH883080|Mus musculus domesticus DNA, BAC clone: B6Ng01-062M16, 5' end.DH883081|Mus musculus domesticus DNA, BAC clone: B6Ng01-062M16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,228,592 - 31,229,699)(31,361,747 - 31,361,975)
sequence
gaattcttcttcttatttcatacaatggcctactgtcagctaatagttca
aaacacaactctattttttttgcttattttcttttaagaattcatctcta
cctcaagtttcttcataattactgtcctcacattgcctgacattgcctag
taatttaattttccctcaattgtgaagttccccttcaaacaatgttcatg
taaaaagcttattaatatttcatgagatatcgatgccagcatcaaaaatg
ctgcttccatttcttacctgttttgggaacctgctgcagctgctccccag
gggcagcatcccaggtggccacaccactggcaagcctatttatagtctct
gtaaacccatcccttttattcattctgatgatagaattaaagagctatgg
aaatatacatggaaaaccctaacatgattagtaactgaacatgtctctgt
ggaatatgggtctctgtcatgaatatgattccatattcctcctactcatg
ctaagggtgtaacatgatatgttataagtcttcctagtttgctaggttct
tgtcttaggcaggatagtgtgctgaaatttggctttttccctgcatttag
aacattagctttgccctatgtgctagtaacatggttcattgcactgatgg
atgtgttggtgccatagtaacatcatcaatatgacctggttgtggcgtca
tgttcttcctgcatccgtgtttgcttgcagcattaggttgagcatatacg
gctgctgtagttgcagggcacactgggctgaactctgctgatagcagtac
ccagttttgatacaaagatagagtgaacttgagagcattcttctattttg
gaacatttcatgaactactgataataaaaggaaaagtttgatatcatttg
tcaatgagaccttctgagacatggatccttttactaataatttgtttctg
ttctcgtgagaaactacttaattttgtttctggagcttgtctgcattatc
tgagttatagagtgcaggggatgcttaatattcaaatctccaaaaatatt
acatggatagtatagcaggctacataatatttgtgagtaaataa
cagtttctttttattcaagaaaaccagccacctcctttcatgtcctgttg
tgtgtgtttatgggtgtaaaactgaatggttggctgtctatgtgcatgca
tatccatgctatcttgcaagagaggtaggtgtggggtgaagaggaggagg
atgacaagaaggagtgggaggatgaggagaatgattaaagaacggagtca
tgtagtattggtcacctggatgttttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_31228592_31229699
seq2: B6Ng01-062M16.b_47_1140

seq1  GAATTCTTCTTCTTATTTCATACAATGGCCTACTGTCAGCTAATAGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTCTTATTTCATACAATGGCCTACTGTCAGCTAATAGTTCA  50

seq1  AAACACAACTCTATTTTTTTTGCTTATTTTCTTTTAAGAATTCATCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAACTCTATTTTTTTTGCTTATTTTCTTTTAAGAATTCATCTCTA  100

seq1  CCTCAAGTTTCTTCATAATTACTGTCCTCACATTGCCTGACATTGCCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGTTTCTTCATAATTACTGTCCTCACATTGCCTGACATTGCCTAG  150

seq1  TAATTTAATTTTCCCTCAATTGTGAAGTTCCCCTTCAAACAATGTTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAATTTTCCCTCAATTGTGAAGTTCCCCTTCAAACAATGTTCATG  200

seq1  TAAAAAGCTTATTAATATTTCATGAGATATCGATGCCAGCATCAAAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGCTTATTAATATTTCATGAGATATCGATGCCAGCATCAAAAATG  250

seq1  CTGCTTCCATTTCTTACCTGTTTTGGGAACCTGCTGCAGCTGCTCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCATTTCTTACCTGTTTTGGGAACCTGCTGCAGCTGCTCCCCAG  300

seq1  GGGCAGCATCCCAGGTGGCCACACCACTGGCAAGCCTATTTATAGTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCATCCCAGGTGGCCACACCACTGGCAAGCCTATTTATAGTCTCT  350

seq1  GTAAACCCATCCCTTTTATTCATTCTGATGATAGAATTAAAGAGCTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCCATCCCTTTTATTCATTCTGATGATAGAATTAAAGAGCTATGG  400

seq1  AAATATACATGGAAAACCCTAACATGATTAGTAACTGAACATGTCTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACATGGAAAACCCTAACATGATTAGTAACTGAACATGTCTCTGT  450

seq1  GGAATATGGGTCTCTGTCATGAATATGATTCCATATTCCTCCTACTCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATGGGTCTCTGTCATGAATATGATTCCATATTCCTCCTACTCATG  500

seq1  CTAAGGGTGTAACATGATATGTTATAAGTCTTCCTAGTTTGCTAGGTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGTGTAACATGATATGTTATAAGTCTTCCTAGTTTGCTAGGTTCT  550

seq1  TGTCTTAGGCAGGATAGTGTGCTGAAATTTGGCTTTTTCCCTGCATTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAGGCAGGATAGTGTGCTGAAATTTGGCTTTTTCCCTGCATTTAG  600

seq1  AACATTAGCTTTGCCCTATGTGCTAGTAACATGGTTCATTGCACTGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAGCTTTGCCCTATGTGCTAGTAACATGGTTCATTGCACTGATGG  650

seq1  ATGTGTTGGTGCCATAGTAACATCATCAATATGACCTGGTTGTGGCGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTGGTGCCATAGTAACATCATCAATATGACCTGGTTGTGGCGTCA  700

seq1  TGTTCTTCCTGCATCCGTGTTTGCTTGCAGCATTAGGTTGAGCATATACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCCTGCATCCGTGTTTGCTTGCAGCATTAGGTTGAGCATATACG  750

seq1  GCTGCTGTAGTTGCAGGGCACACTGGGCTGAACTCTGCTGATAGCAGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTAGTTGCAGGGCACACTGGGCTGAACTCTGCTGATAGCAGTAC  800

seq1  CCAGTTTTGATACAAAGATAGAGTGAACTTGAGAGCATTCTTCTATTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTTGATACAAAGATAGAGTGAACTTGAGAGCATTCTTCTATTTTG  850

seq1  GAACATTTCATGAACTACTGATAATAAAAGGAAAAGTTTGATATCATTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTCATGAACTACTGATAATAAAAGGAAAAGTTTGATATCATTTG  900

seq1  TCAATGAGACCTTCTGAGACATGGATCCTTTTAACTAATAATTTTGTTTC  950
      |||||||||||||||||||||||||||||||| |||||||| ||||||||
seq2  TCAATGAGACCTTCTGAGACATGGATCCTTTT-ACTAATAA-TTTGTTTC  948

seq1  TGTTCTCGTGAGAAACTACTTAATTTTTGTTTCTGGAGCTTGTCTGCATT  1000
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTTCTCGTGAGAAACTACTTAA-TTTTGTTTCTGGAGCTTGTCTGCATT  997

seq1  ATCTGAGTTATAGAAGTTGGCAGGGGATGCTTAAATATTCAAATCTCCAA  1050
      ||||||||||||| |||  ||||||||||||| |||||||||||||||||
seq2  ATCTGAGTTATAG-AGT--GCAGGGGATGCTT-AATATTCAAATCTCCAA  1043

seq1  AAATATTACAATGGATAGGTATAGCAGCGCTACCATAAATATTTGTGAGT  1100
      ||||||||| ||||||| ||||||||| |||| ||| |||||||||||||
seq2  AAATATTAC-ATGGATA-GTATAGCAG-GCTA-CAT-AATATTTGTGAGT  1088

seq1  TAAAATAA  1108
        ||||||
seq2  --AAATAA  1094

seq1: chr12_31361747_31361975
seq2: B6Ng01-062M16.g_72_300 (reverse)

seq1  CAAAAAACATCCCTGTCTCCATTATTGCCTGTCTCCCTTCTCTCTTCATT  50
      ||||||||||||  ||  ||| || | | || |||| |||| |  |||||
seq2  CAAAAAACATCCAGGTGACCAATACTACATGACTCCGTTCTTTAATCATT  50

seq1  CTCCTCATCCTCCCACTCCTTCTTGTCATCCTCCTCCTCTTCACCCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCATCCTCCCACTCCTTCTTGTCATCCTCCTCCTCTTCACCCCACA  100

seq1  CCTACCTCTCTTGCAAGATAGCATGGATATGCATGCACATAGACAGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTCTCTTGCAAGATAGCATGGATATGCATGCACATAGACAGCCAA  150

seq1  CCATTCAGTTTTACACCCATAAACACACACAACAGGACATGAAAGGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAGTTTTACACCCATAAACACACACAACAGGACATGAAAGGAGGT  200

seq1  GGCTGGTTTTCTTGAATAAAAAGAAACTG  229
      |||||||||||||||||||||||||||||
seq2  GGCTGGTTTTCTTGAATAAAAAGAAACTG  229