BAC Information

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BAC

Clone NameB6Ng01-064G20
Chromosome12 (Build37)
Map Location 20,996,639 - 21,178,443
singlet/doubletdoublet
Overlap geneLOC668698, LOC546752, EG629257, Ddef2
Upstream geneEG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377, LOC625810, 1700030C10Rik, 3110053B16Rik
Downstream geneItgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407, LOC100042796, 6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064G20.bB6Ng01-064G20.g
ACCDH884215DH884216
length1,103979
definitionDH884215|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G20, 5' end.DH884216|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,177,343 - 21,178,443)(20,996,639 - 20,997,623)
sequence
gaattcccagccagtctggtctacatagcatgttccaggccagtcagggc
tatagggctatggtctcgaaacaagccaactgtctataaaccacctgaga
gcctaccttggtagcctaatggggacttcctgtttctagaactgcaacaa
gccccagctgttcgaggcatggatatatagcattaggtttcgacaaccag
cggtgcagactctcagacaggacctgtgggaagactccaacgtctattgg
ctggctctgtagatacaaggggctgagagtgacggagtacagctggcctc
tacaagaaatggggaagcgaagggaccttgaagatgctttgatcttagca
cagtgagacccacgcttcacttcccacctgcaaatctgaatgaagagtgt
gtgctccctgaagctgctaggcagacagaaacatgctactgaagcaagag
gaaatgagagtcaggaaaggcttaccctgcctcaagtctcagcctgaaac
acaggaggggtgggaaggtcacacccaggcaacagagccagggagtatgg
agaaagacacagtctctacatgctctggaagcaacggactgagccaagct
gccgtagacaaactggggccaggcaagaggtcatatggggccagtccatg
acaaatcaggacagacttaggagggtgaaaccaggaaagacatagcacag
gccaggcataaatgctcaactgttctcacagcaaaggaccgctcttttct
ggacaagtagccatcctgggacactgaacactaggatcagtcgctgagaa
cttcctcttttggaacagcacttttggagcgggagctgtcttagctctga
tggccaccgcggtgtggccagcagctgaatccctcactcaatccctgact
tatttctgactagttctaaaacaactcaactatccttagactcgtttaat
aaatataaaggatgagtcccaacaaagtagttacaaagggaggtctataa
actgtggcttaaccaacatcaacatcggaaatcatggtcctccctaggtg
acttcaggcagatgaaccttatctcaacacaggattccaagataagtact
cgg
tggccgagacccttgaggactacaaggcacccactgcctctagcttcacc
atgggcacggcccagtgccggaacaccgcggcggccaccgaggaggtgag
cggtagcttagccggcgccgggtgggaggcttagggtcgcggggatcgcg
ctgcgccctgggcacccgctaggcttccgcgcctggtgcccgatacccag
tgccctccggctgcgcccacacccgggaaaagtttctggtaccccaaagc
cggacgcagccggaccagcagtgcccgacacagaagccctttgttccctg
ctctagggagaggctgcttggccaccttgggccttttttgggaacgctcc
tgtctgttcccatttccctcgcagggtttcaggtcctttgctcccatcct
cagagaggtcaacttcggctgtagagtctgtggcggcttcgagccgggga
cccctgcgagctctgcttcccggagtgatggctctccctgcgcggacctc
tccaacttgttccggacgtagcccggcgggggcagctgtggcttctgagc
caccatgtagagcagatccagggaccccaagctgcttaggcactggtgcc
catcccatcttgggaggcctggcagttcccactacttgcaacagagcaga
gctgtagaggggatgtggagaatggtctctttgaggtccaaaaggtcttt
ggtggccgcttctgggctacctgtgtggtgcctgttgacagtgtgatcag
ctcctgtgccttaaccttggaaagggcctgcatagtcattgtattgagtg
ggctaagcagaaagctctccagatcctggggaagagggactgcgagaagg
gagcagttgggttgaaattgaagcaggctttggagaggctggttgagtcc
agggaccacggctgtcaccactggggaagcctcacttacatattgtctta
cctccccacagaattaagagtttgtgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_21177343_21178443
seq2: B6Ng01-064G20.b_47_1149 (reverse)

seq1  CCGAGTAC-TATCTTGGAATCCTTGTTTGAGAATAAGTGTCATCTGCTTG  49
      |||||||| ||||||||||||||   ||||| |||||  |||||||| ||
seq2  CCGAGTACTTATCTTGGAATCCTGTGTTGAG-ATAAGGTTCATCTGCCTG  49

seq1  GAAAGTCACCTGAGGA-GACCATGATTTCCGATGTTGATGTTGGTTATAG  98
        |||||||||  ||| |||||||||||||||||||||||||||||| ||
seq2  --AAGTCACCTAGGGAGGACCATGATTTCCGATGTTGATGTTGGTTA-AG  96

seq1  CAACAGTTTATAGACTTCCTTTTGTAACTACTTTGTTGTGACTCATTCTT  148
      | ||||||||||||| ||| |||||||||||||||||| ||||||| |||
seq2  CCACAGTTTATAGACCTCCCTTTGTAACTACTTTGTTGGGACTCATCCTT  146

seq1  TATATTTATTAAACGAGTCTAAGGATAGTTTGAGTTGTTTTAGAACTAGT  198
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATATTTATTAAACGAGTCTAAGGATAG-TTGAGTTGTTTTAGAACTAGT  195

seq1  CAGAAATAAGTCAGGGATTGAGTGAGGGATTCAGCTGCTGGC--CACCGC  246
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  CAGAAATAAGTCAGGGATTGAGTGAGGGATTCAGCTGCTGGCCACACCGC  245

seq1  GGTTGGCATCAGAGCTTAGACAGCTTCCGCTCC-AAAGTGCTGTTCCCAA  295
      ||| | |||||||||| |||||||| ||||||| ||||||||||||| ||
seq2  GGTGGCCATCAGAGCTAAGACAGCTCCCGCTCCAAAAGTGCTGTTCCAAA  295

seq1  AGAGG-AGTTCTCAGCGACTGATCCTAGTGTTCAGTGTCCCAGGATGGCT  344
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGTTCTCAGCGACTGATCCTAGTGTTCAGTGTCCCAGGATGGCT  345

seq1  ACTTGTCCAG-AAAGAGCGGTCCTTTGCTGTGAGAACAGTTGAGCATTTA  393
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCCAGAAAAGAGCGGTCCTTTGCTGTGAGAACAGTTGAGCATTTA  395

seq1  TGCCTGGCCTGTGCTATGTCTTTCCTGGTTTCACCCTCCTAAGTCTGTCC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCCTGTGCTATGTCTTTCCTGGTTTCACCCTCCTAAGTCTGTCC  445

seq1  TGATTTGTCATGGACTGGCCCCATATGACCTCTTGCCTGGCCCCAGTTTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTCATGGACTGGCCCCATATGACCTCTTGCCTGGCCCCAGTTTG  495

seq1  TCTACGGCAGCTTGGCTCAGTCCGTTGCTTCCAGAGCATGTAGAGACTGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACGGCAGCTTGGCTCAGTCCGTTGCTTCCAGAGCATGTAGAGACTGT  545

seq1  GTCTTTCTCCATACTCCCTGGCTCTGTTGCCTGGGTGTGACCTTCCCACC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCTCCATACTCCCTGGCTCTGTTGCCTGGGTGTGACCTTCCCACC  595

seq1  CCTCCTGTGTTTCAGGCTGAGACTTGAGGCAGGGTAAGCCTTTCCTGACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGTGTTTCAGGCTGAGACTTGAGGCAGGGTAAGCCTTTCCTGACT  645

seq1  CTCATTTCCTCTTGCTTCAGTAGCATGTTTCTGTCTGCCTAGCAGCTTCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTCCTCTTGCTTCAGTAGCATGTTTCTGTCTGCCTAGCAGCTTCA  695

seq1  GGGAGCACACACTCTTCATTCAGATTTGCAGGTGGGAAGTGAAGCGTGGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCACACACTCTTCATTCAGATTTGCAGGTGGGAAGTGAAGCGTGGG  745

seq1  TCTCACTGTGCTAAGATCAAAGCATCTTCAAGGTCCCTTCGCTTCCCCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTGTGCTAAGATCAAAGCATCTTCAAGGTCCCTTCGCTTCCCCAT  795

seq1  TTCTTGTAGAGGCCAGCTGTACTCCGTCACTCTCAGCCCCTTGTATCTAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTAGAGGCCAGCTGTACTCCGTCACTCTCAGCCCCTTGTATCTAC  845

seq1  AGAGCCAGCCAATAGACGTTGGAGTCTTCCCACAGGTCCTGTCTGAGAGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGCCAATAGACGTTGGAGTCTTCCCACAGGTCCTGTCTGAGAGT  895

seq1  CTGCACCGCTGGTTGTCGAAACCTAATGCTATATATCCATGCCTCGAACA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCGCTGGTTGTCGAAACCTAATGCTATATATCCATGCCTCGAACA  945

seq1  GCTGGGGCTTGTTGCAGTTCTAGAAACAGGAAGTCCCCATTAGGCTACCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGCTTGTTGCAGTTCTAGAAACAGGAAGTCCCCATTAGGCTACCA  995

seq1  AGGTAGGCTCTCAGGTGGTTTATAGACAGTTGGCTTGTTTCGAGACCATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGCTCTCAGGTGGTTTATAGACAGTTGGCTTGTTTCGAGACCATA  1045

seq1  GCCCTATAGCCCTGACTGGCCTGGAACATGCTATGTAGACCAGACTGGCT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATAGCCCTGACTGGCCTGGAACATGCTATGTAGACCAGACTGGCT  1095

seq1  GGGAATTC  1101
      ||||||||
seq2  GGGAATTC  1103

seq1: chr12_20996639_20997623
seq2: B6Ng01-064G20.g_76_1054

seq1  TGGCCGAGACCCTTGAGGACTACAAGGCACCCACTGCCTCTAGCTTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGAGACCCTTGAGGACTACAAGGCACCCACTGCCTCTAGCTTCACC  50

seq1  ATGGGCACGGCCCAGTGCCGGAACACCGCGGCGGCCACCGAGGAGGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCACGGCCCAGTGCCGGAACACCGCGGCGGCCACCGAGGAGGTGAG  100

seq1  CGGTAGCTTAGCCGGCGCCGGGTGGGAGGCTTAGGGTCGCGGGGATCGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAGCTTAGCCGGCGCCGGGTGGGAGGCTTAGGGTCGCGGGGATCGCG  150

seq1  CTGCGCCCTGGGCACCCGCTAGGCTTCCGCGCCTGGTGCCCGATACCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGCCCTGGGCACCCGCTAGGCTTCCGCGCCTGGTGCCCGATACCCAG  200

seq1  TGCCCTCCGGCTGCGCCCACACCCGGGAAAAGTTTCTGGTACCCCAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCCGGCTGCGCCCACACCCGGGAAAAGTTTCTGGTACCCCAAAGC  250

seq1  CGGACGCAGCCGGACCAGCAGTGCCCGACACAGAAGCCCTTTGTTCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACGCAGCCGGACCAGCAGTGCCCGACACAGAAGCCCTTTGTTCCCTG  300

seq1  CTCTAGGGAGAGGCTGCTTGGCCACCTTGGGCCTTTTTTGGGAACGCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGGAGAGGCTGCTTGGCCACCTTGGGCCTTTTTTGGGAACGCTCC  350

seq1  TGTCTGTTCCCATTTCCCTCGCAGGGTTTCAGGTCCTTTGCTCCCATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTCCCATTTCCCTCGCAGGGTTTCAGGTCCTTTGCTCCCATCCT  400

seq1  CAGAGAGGTCAACTTCGGCTGTAGAGTCTGTGGCGGCTTCGAGCCGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGTCAACTTCGGCTGTAGAGTCTGTGGCGGCTTCGAGCCGGGGA  450

seq1  CCCCTGCGAGCTCTGCTTCCCGGAGTGATGGCTCTCCCTGCGCGGACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCGAGCTCTGCTTCCCGGAGTGATGGCTCTCCCTGCGCGGACCTC  500

seq1  TCCAACTTGTTCCGGACGTAGCCCGGCGGGGGCAGCTGTGGCTTCTGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTTGTTCCGGACGTAGCCCGGCGGGGGCAGCTGTGGCTTCTGAGC  550

seq1  CACCATGTAGAGCAGATCCAGGGACCCCAAGCTGCTTAGGCACTGGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGTAGAGCAGATCCAGGGACCCCAAGCTGCTTAGGCACTGGTGCC  600

seq1  CATCCCATCTTGGGAGGCCTGGCAGTTCCCACTACTTGCAACAGAGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCATCTTGGGAGGCCTGGCAGTTCCCACTACTTGCAACAGAGCAGA  650

seq1  GCTGTAGA-GGGATGTGGAGAATGGTCTCTTTGAGGTCCAAAAGGTCTTT  699
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGAGGGGATGTGGAGAATGGTCTCTTTGAGGTCCAAAAGGTCTTT  700

seq1  GGTGGCCGCTTCTGGGCTACCTGTGTGGTGCCTGTTGACAGTGTGATCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCGCTTCTGGGCTACCTGTGTGGTGCCTGTTGACAGTGTGATCAG  750

seq1  CTCCTGTGCCCTTAACC-TGGAAAGGGCCTGCATAGTCATTGTATTGAGT  798
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  CTCCTGTG-CCTTAACCTTGGAAAGGGCCTGCATAGTCATTGTATTGAGT  799

seq1  -GGCTAAGCAGAAAGCTCTCCAGATCCTGGGGAAGAGGGACTGCGAGAAG  847
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAAGCAGAAAGCTCTCCAGATCCTGGGGAAGAGGGACTGCGAGAAG  849

seq1  GAAGCAGTTTGGGTTGAAAATTGAAGCAGGCTTGGAAGAGGCTGTGTGAG  897
      | ||||| |||||||| |||||||||||||||| | ||||||||  ||||
seq2  GGAGCAG-TTGGGTTG-AAATTGAAGCAGGCTTTGGAGAGGCTGGTTGAG  897

seq1  TCCAGGGACCACGGCTGTCCACAGCTTGGGAAAGCCTCACTTACATAATT  947
      |||||||||||||||||||  ||   |||| ||||||||||||||| |||
seq2  TCCAGGGACCACGGCTGTCACCA--CTGGGGAAGCCTCACTTACAT-ATT  944

seq1  TTCTTTACCTCCCCAACAGAATTTAGAGTTTTGTGTTT  985
       || |||||||||| |||||||| |||| |||||||||
seq2  GTC-TTACCTCCCC-ACAGAATTAAGAG-TTTGTGTTT  979