BAC Information

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BAC

Clone NameB6Ng01-064L10
Chromosome12 (Build37)
Map Location 55,640,008 - 55,759,406
singlet/doubletdoublet
Overlap geneLOC621363, 1110002B05Rik
Upstream geneNpas3, Egln3, EG665239, EG665251, LOC665256
Downstream geneEapp, LOC673582, LOC100039735, LOC100039764, Snx6, Cfl2, Baz1a, LOC100039804, 2700097O09Rik, LOC665144, EG665137, Srp54, 1700047I17Rik, LOC100039815, LOC665155, LOC100039830, Ppp2r3c, 1110008L16Rik, LOC673593, LOC665366, Psma6, LOC100039871, Nfkbia, Aldoa-ps1, Insm2, Garnl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064L10.bB6Ng01-064L10.g
ACCDH884417DH884418
length1,040202
definitionDH884417|Mus musculus domesticus DNA, BAC clone: B6Ng01-064L10, 5' end.DH884418|Mus musculus domesticus DNA, BAC clone: B6Ng01-064L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,758,411 - 55,759,406)(55,640,008 - 55,640,209)
sequence
gaattctctcttgtggagcaggcctaaaatcaagttagaaagcagttgat
tcccccctaacagtcaggccattattgtaccagtgaacttgtcttgcctg
gcagcttagtattgtagctcacaagtgggtgggaccactgaaaaattgtc
tccctcagcagtttatatcttttggcacaatgaaaggtagtcagcagcca
gggaagggtggtgcacacctttaattctggcactctgtgagtctgaggtt
agcctggttgagactgattaagctggtgtccagagcaagttctaggacaa
ccaaggccacacaaagaaaccctgtctggaagggggccgtggggaggaga
tatctagcaagaaggaaacttccagctcagatccagcttggtttctgagc
ttacttcttaccatcatgtgtctgaaagatgagtccaggctcggtgtggt
tggtgcatacctgtaatcgtagctcgaaggagtctgagaaaggtgaatta
ctttgagatcgaggccagcctatactacatagtgaggtcctgtatattgg
ttaagttatttttgtttttgtttttcatttccacaaaaaactagaatcac
ttgggaagagggaaccttagctgaggaacatgagattggtctatggtggg
cgtgtcctccctactgtgggcagtgccattgctaggcaagtggggtctgg
gccgtttaagaaagcaagtgagcaagccagaaagagcatgctcctaagca
gtattcctctgtggtttctgcttcaatctcctgcctggagttcctggctt
ggcttccctccgtgatgttctgtaacctacaagacgaaataaaataaaat
aaaatgactaggcaccttgtgaaagcagatctcaagtctattgttgtttg
taaggtctttgctcgtaaggagcataaggaattaagttatacctgtcaac
cttggaaaggtttaaagcttaaagcagcaggtttgaaacttttaagactg
gtgagtttgcaggctacttaaattatgtcattccacaagc
ctctcataagttaagagtgctgactgcagtttctctctcccctttgttgg
gtatttcagctaatgtcatccccattgggtcctgggaacctcttgcaaag
gggaaactgggaaagggaaaacatttgaaatgtatataaataaaataaca
aataaacaatttatttggttttttggtttgttttggggtttttggggggt
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_55758411_55759406
seq2: B6Ng01-064L10.b_89_1084 (reverse)

seq1  GCTTGTGAAATGACATAA-TTAAGTAGCCTGC-AACTCACATGTC-TAAA  47
      ||||||| |||||||||| ||||||||||||| |||||||  ||| ||||
seq2  GCTTGTGGAATGACATAATTTAAGTAGCCTGCAAACTCACCAGTCTTAAA  50

seq1  AGTTTCAAACCTGCTGCTTTAAGCTTTAAAACCTTTCC-AGGTTGACAGG  96
      ||||||||||||||||||||||||||| |||||||||| |||||||||||
seq2  AGTTTCAAACCTGCTGCTTTAAGCTTT-AAACCTTTCCAAGGTTGACAGG  99

seq1  TATTAACTTAAATTCCTTATGCTCCTTACGAGCAAAGACCTTACAAACAA  146
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TA-TAACTT-AATTCCTTATGCTCCTTACGAGCAAAGACCTTACAAACAA  147

seq1  CAATAGACTTGAGATCTGCTTTCACAAGGTGCCTAGTCATTTTATTTTAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGACTTGAGATCTGCTTTCACAAGGTGCCTAGTCATTTTATTTTAT  197

seq1  TTTATTTCGTCTTGTAGGTTACAGAACATCACGGAGGGAAGCCAAGCCAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCGTCTTGTAGGTTACAGAACATCACGGAGGGAAGCCAAGCCAG  247

seq1  GAACTCCAGGCAGGAGATTGAAGCAGAAACCACAGAGGAATACTGCTTAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCAGGCAGGAGATTGAAGCAGAAACCACAGAGGAATACTGCTTAG  297

seq1  GAGCATGCTCTTTCTGGCTTGCTCAACTTGCTTTCTTAAACGGCCCAGAC  346
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAGCATGCTCTTTCTGGCTTGCTC-ACTTGCTTTCTTAAACGGCCCAGAC  346

seq1  CCCACTTGCCTAGCAATGGCACTGCCCACAGTAGGGAGGACACGCCCACC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTGCCTAGCAATGGCACTGCCCACAGTAGGGAGGACACGCCCACC  396

seq1  ATAGACCAATCTCATGTTCCTCAGCTAAGGTTCCCTCTTCCCAAGTGATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCAATCTCATGTTCCTCAGCTAAGGTTCCCTCTTCCCAAGTGATT  446

seq1  CTAGTTTTTTGTGGAAATGAAAAACAAAAACAAAAATAACTTAACCAATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTTTGTGGAAATGAAAAACAAAAACAAAAATAACTTAACCAATA  496

seq1  TACAGGACCTCACTATGTAGTATAGGCTGGCCTCGATCTCAAAGTAATTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGACCTCACTATGTAGTATAGGCTGGCCTCGATCTCAAAGTAATTC  546

seq1  ACCTTTCTCAGACTCCTTCGAGCTACGATTACAGGTATGCACCAACCACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCTCAGACTCCTTCGAGCTACGATTACAGGTATGCACCAACCACA  596

seq1  CCGAGCCTGGACTCATCTTTCAGACACATGATGGTAAGAAGTAAGCTCAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCCTGGACTCATCTTTCAGACACATGATGGTAAGAAGTAAGCTCAG  646

seq1  AAACCAAGCTGGATCTGAGCTGGAAGTTTCCTTCTTGCTAGATATCTCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAGCTGGATCTGAGCTGGAAGTTTCCTTCTTGCTAGATATCTCCT  696

seq1  CCCCACGGCCCCCTTCCAGACAGGGTTTCTTTGTGTGGCCTTGGTTGTCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACGGCCCCCTTCCAGACAGGGTTTCTTTGTGTGGCCTTGGTTGTCC  746

seq1  TAGAACTTGCTCTGGACACCAGCTTAATCAGTCTCAACCAGGCTAACCTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTGCTCTGGACACCAGCTTAATCAGTCTCAACCAGGCTAACCTC  796

seq1  AGACTCACAGAGTGCCAGAATTAAAGGTGTGCACCACCCTTCCCTGGCTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACAGAGTGCCAGAATTAAAGGTGTGCACCACCCTTCCCTGGCTG  846

seq1  CTGACTACCTTTCATTGTGCCAAAAGATATAAACTGCTGAGGGAGACAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTACCTTTCATTGTGCCAAAAGATATAAACTGCTGAGGGAGACAAT  896

seq1  TTTTCAGTGGTCCCACCCACTTGTGAGCTACAATACTAAGCTGCCAGGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGTGGTCCCACCCACTTGTGAGCTACAATACTAAGCTGCCAGGCA  946

seq1  AGACAAGTTCACTGGTACAATAATGGCCTGACTGTTAGGGGGGAATCAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGTTCACTGGTACAATAATGGCCTGACTGTTAGGGGGGAATCAAC  996

seq1: chr12_55640008_55640209
seq2: B6Ng01-064L10.g_75_276

seq1  CTCTCATAAGTTAAGAGTGCTGACTGCAGTTTCTCTCTCCCCTTTGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATAAGTTAAGAGTGCTGACTGCAGTTTCTCTCTCCCCTTTGTTGG  50

seq1  GTATTTCAGCTAATGTCATCCCCATTGGGTCCTGGGAACCTCTTGCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCAGCTAATGTCATCCCCATTGGGTCCTGGGAACCTCTTGCAAAG  100

seq1  GGGAAACTGGGAAAGGGAAAACATTTGAAATGTATATAAATAAAATAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACTGGGAAAGGGAAAACATTTGAAATGTATATAAATAAAATAACA  150

seq1  AATAAACAATTTATTTGGTTTTTTGGTTTGTTTTGGGGTTTTTGGGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAATTTATTTGGTTTTTTGGTTTGTTTTGGGGTTTTTGGGGGGT  200

seq1  TG  202
      ||
seq2  TG  202