BAC Information

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BAC

Clone NameB6Ng01-067C23
Chromosome12 (Build37)
Map Location 19,120,336 - 19,121,445
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042573, LOC668539, LOC100043324, LOC636282, EG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568, LOC668570, EG668413
Downstream geneLOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594, EG668600, LOC100042727, LOC673301
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067C23.bB6Ng01-067C23.g
ACCDH886152DH886153
length5651,099
definitionDH886152|Mus musculus domesticus DNA, BAC clone: B6Ng01-067C23, 5' end.DH886153|Mus musculus domesticus DNA, BAC clone: B6Ng01-067C23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtaaagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaagacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgttggatcttccacaaaatatca
cattggtgcactata
gaattcacatgagaatgtctttctgcccatgactcagctgtatctgtgag
taagtaagagagttagttaatacttagttgtactcaggcttttgggtgag
gctctgtggggcttgtgtcttctggggcaaagtcaagaagcagccccaca
tgtcagtgtccacacatgctgccgtgggtgtgctgagaaagcctattcat
cagtttaatctagactgacagcacctcctctcctgcctcctcacttgaaa
aatgtcactgagctcgctttgtggggaaagcgggaggtgggaatttccta
ggtctgtgccactttgtgcggttgaaggggtcctgaatcttttctgatga
tggcaataaggacatgttgctgtcttggatttcccacttctgggtcttgt
tactatggaagaaaggttctttctcagctgcaagtgagtagctcaaaaga
gaaaaccgtgtccaacagaggccccaaaaggaggaaggaaggacactcag
gacttaatatggaggcaccaattgcactgtggaatacaggtgatgaaatt
gcttcacatcaattctgttttctgttttaaaacatttggtttgttgcttt
gaaaacaaatatatggaaagaatgcagttcggtgacacgaaaggcatttc
ttcttcctaactttagatgctgtttccctctaccctttgacaagtcgctg
gccagcagaggagacagacatgggagggcagccaatgctctttctggaga
agtggcctcagcccaagctcacaaggtgtgtgtgtggagggtcaggagca
atttttaaactaaatgatgaactgctgtagggagtctatttcattaaaac
acactctttgtactgatgaaaccctaagctacaggggacaggagaggcat
ggagacactggacatgggacagtcttcatgtttctctgtgactcacaggc
tgtcttctggagacaggggacagcacagtctggtggcaggagatctcact
gtgactttccactatttaaggtcatgagaacacaaagaaggaacattgtc
ccgtaggatagttttctgtatgtcctgccatagaaccctttacatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19120336_19121445
seq2: B6Ng01-067C23.g_68_1166 (reverse)

seq1  TCCCATGTAGAAGGGTCTATAGCAGTGACATTACAGAAGACTATCCTACG  50
      ||||||||| | || ||||| |||| |||| ||||||| |||||||||||
seq2  TCCCATGTAAAGGGTTCTATGGCAG-GACA-TACAGAAAACTATCCTACG  48

seq1  GGACAATTGTTTCCTCTTTGTGTTTCCTCATGAGCTTTAAATAGTTGGAA  100
      |||||| |||| | ||||||||||  ||||||| | |||||||| |||||
seq2  GGACAA-TGTTCCTTCTTTGTGTT--CTCATGA-CCTTAAATAG-TGGAA  93

seq1  AGTCACAGTGAGATTCTCCCTGCCACCAAGACTGTGCTGTCCCCTGTCTC  150
      ||||||||||||| ||| ||||||||| ||||||||||||||||||||||
seq2  AGTCACAGTGAGA-TCT-CCTGCCACC-AGACTGTGCTGTCCCCTGTCTC  140

seq1  CAGAAGACAGCCTGGTGAGTCACAGAGAAACATGAAGACTGTCCCCTTGT  200
      ||||||||||||| |||||||||||||||||||||||||||| ||| |||
seq2  CAGAAGACAGCCT-GTGAGTCACAGAGAAACATGAAGACTGT-CCCATGT  188

seq1  CCAGTGTCTCCATGCCTCCTCCTGTCCCCTGTAGCTTAGGGTTTCATCAG  250
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCAGTGTCTCCATGCCT-CTCCTGTCCCCTGTAGCTTAGGGTTTCATCAG  237

seq1  TACAAAGAGTGTGTTTTAATG-AATAGACTCCCTACAGCAGTTCATCATT  299
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TACAAAGAGTGTGTTTTAATGAAATAGACTCCCTACAGCAGTTCATCATT  287

seq1  TAGTTT-AAAATTGCTCCTGACCCTCCACACACACACCTTGTGAGCTTGG  348
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAAAATTGCTCCTGACCCTCCACACACACACCTTGTGAGCTTGG  337

seq1  GCTGAGGCCACTTCTCCAGAAAGAGCATTGGCTGCCCTCCCATGTCTGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCCACTTCTCCAGAAAGAGCATTGGCTGCCCTCCCATGTCTGTC  387

seq1  TCCTCTGCTGGCCAGCGACTTGTCAAAGGGTAGAGGGAAACAGCATCTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCTGGCCAGCGACTTGTCAAAGGGTAGAGGGAAACAGCATCTAA  437

seq1  AGTTAGGAAGAAGAAATGCCTTTCGTGTCACCGAACTGCATTCTTTCCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGAAGAAGAAATGCCTTTCGTGTCACCGAACTGCATTCTTTCCAT  487

seq1  ATATTTGTTTTCAAAGCAACAAACCAAATGTTTTAAAACAGAAAACAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTTTTCAAAGCAACAAACCAAATGTTTTAAAACAGAAAACAGAA  537

seq1  TTGATGTGAAGCAATTTCATCACCTGTATTCCACAGTGCAATTGGTGCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGAAGCAATTTCATCACCTGTATTCCACAGTGCAATTGGTGCCT  587

seq1  CCATATTAAGTCCTGAGTGTCCTTCCTTCCTCCTTTTGGGGCCTCTGTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTAAGTCCTGAGTGTCCTTCCTTCCTCCTTTTGGGGCCTCTGTTG  637

seq1  GACACGGTTTTCTCTTTTGAGCTACTCACTTGCAGCTGAGAAAGAACCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACGGTTTTCTCTTTTGAGCTACTCACTTGCAGCTGAGAAAGAACCTT  687

seq1  TCTTCCATAGTAACAAGACCCAGAAGTGGGAAATCCAAGACAGCAACATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATAGTAACAAGACCCAGAAGTGGGAAATCCAAGACAGCAACATG  737

seq1  TCCTTATTGCCATCATCAGAAAAGATTCAGGACCCCTTCAACCGCACAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATTGCCATCATCAGAAAAGATTCAGGACCCCTTCAACCGCACAAA  787

seq1  GTGGCACAGACCTAGGAAATTCCCACCTCCCGCTTTCCCCACAAAGCGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACAGACCTAGGAAATTCCCACCTCCCGCTTTCCCCACAAAGCGAG  837

seq1  CTCAGTGACATTTTTCAAGTGAGGAGGCAGGAGAGGAGGTGCTGTCAGTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGACATTTTTCAAGTGAGGAGGCAGGAGAGGAGGTGCTGTCAGTC  887

seq1  TAGATTAAACTGATGAATAGGCTTTCTCAGCACACCCACGGCAGCATGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAAACTGATGAATAGGCTTTCTCAGCACACCCACGGCAGCATGTG  937

seq1  TGGACACTGACATGTGGGGCTGCTTCTTGACTTTGCCCCAGAAGACACAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACTGACATGTGGGGCTGCTTCTTGACTTTGCCCCAGAAGACACAA  987

seq1  GCCCCACAGAGCCTCACCCAAAAGCCTGAGTACAACTAAGTATTAACTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACAGAGCCTCACCCAAAAGCCTGAGTACAACTAAGTATTAACTAA  1037

seq1  CTCTCTTACTTACTCACAGATACAGCTGAGTCATGGGCAGAAAGACATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTACTTACTCACAGATACAGCTGAGTCATGGGCAGAAAGACATTC  1087

seq1  TCATGTGAATTC  1110
      ||||||||||||
seq2  TCATGTGAATTC  1099