BAC Information

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BAC

Clone NameB6Ng01-067M13
Chromosome12 (Build37)
Map Location 5,675,945 - 5,784,113
singlet/doubletdoublet
Overlap genenone
Upstream geneItsn2, 4930417G10Rik, A830093I24Rik, Pfn4, EG626534, 0610009D07Rik, Fkbp1b, BC068281, Gm1964, Ubxd4, Atad2b, LOC668332, Klhl29, 2810032G03Rik, LOC435292
Downstream geneLOC100042095, LOC672098, LOC100043137, LOC238049, LOC100042118
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067M13.bB6Ng01-067M13.g
ACCDH886562DH886563
length1,0571,186
definitionDH886562|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M13, 5' end.DH886563|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,675,945 - 5,677,002)(5,782,919 - 5,784,113)
sequence
gaattccctgcatttccccacacaggtcagtgctgccctggcactggatg
cctgtgtcctgcttgtcactctgctagtcactatgctagtcaccatcagt
taatcagactccatggctgagttccagccctggccatgggttatcctggt
ctctggtctctactcccctggcagagagagatgttatccccccctaagag
tggagggggagttgctaaggaacgttattagtgtgctgagggcagaccaa
tctcacagagtttttggcctcagccatttgactctcatcagaaaagcatt
tttatttttatttattttattttttatttatttatttttaagaaaggttt
gtcagtgtaagaaagcaggcccatgaactaaattagaatctgaattattc
tgctcctacaccacatgtgcatttcctggacattttcatctgttgtcctc
aaaggtgggtgaagtctacagtgcagaacttggctctccaaggtttgggg
ctcgtccttcctcccctcttagaggctggcagtcttggcaggggatcttg
tcgtctgacttttggttctgtctcctctcagatcttcacttcccacaaga
atgaattctcagcgtgtctccaggaaattaaagcaatccattatatattg
tctccccatcattgatgcagggataatagcatttaacccacctttgcagt
atactgagtggcctgtcaggatctcttctttcagaggacaacttggaaac
actttaataaatgctccttaactgcaggctttaaaaaatacatggggtca
aatggcaaactggtctgagataactgcttcagcaaacaagactggctgtc
attaactctgcttctttgtctcgtctcttcctctctccaatgattccatt
tctccagtgacatgctatgtccatctggatgtatagtctttggggggaac
ctcgatcttgttcactgcagaatgttcattctattctgcaacattcctat
ctcttaagctggcagtggtggagtcgtatgaaccattgcatcactagtaa
atagact

gaattccatgggacatcacttcctcaatgcttagccaagcctcacttccc
attgtcctgatctcaccagtcacaactttgcttgggtctctccttgggcc
ctagaggaactccatcatctctttctcttccgtggtcttctgaattgcag
cctacagtaaaaagacccacttctgctaattaccaggctagaagggctat
aaagaaggctgtagcaaatcaggaaccctttttcttgttcttctcacctt
tttggagggtccttgctgggtctttgctgtgttctttcccccatgaaagg
tgttcttcatgagcaacgactttcctccactatcctctccatcttctaac
acagttttcatttacccaataaaggtttaagttctgacttccaccaaata
actctgtgaaggaatgactctctaattcatactttgtcccttgtcccaag
tgacatgtaacacattgcaattacttccaaatggctgagtgaacgaatag
ctgagtgtcattgtgagtggcagccatgcaaccagcacctttatgtagat
tattctcgaaccaatctccaagaaagatgtgacccactgtagaaagattc
aaagcctaagtattaagtatcctgggccctggcaaggataaattttctct
gtgtgtcctcagcttctccatctgtacaaggaggagtctgtgaggtatta
tgctgctgagtctgttaagagatgcagttggtgactctcaccaactcatc
aagacgcctcaggcctcatgaactgaagtaggcttttgcctaagccatga
actgaatagttcaataaccctgaatataagtagccgtatactttctgggc
agtaccacctttgattacaggcctttcagtcactgtacttcccaaatcac
agcacacacagaacaggaaactgtctaaagggaagagcaaatagctattg
agacccaggagctcagttgccagttccctcactgtcacagtactgaccac
catcaatgacccatacctgatgaccacctacagtaccatggtgacacatt
tgttctggcacaggctgacttgctgttgggaatctgcctctaccctacag
ccctactatctccccacaaccccatatgcctcctttgctttgaccaacta
gagttcaccattcctttcgtgtgctagagatacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_5675945_5677002
seq2: B6Ng01-067M13.b_48_1104

seq1  GAATTCCCTGCATTTCCCCACACAGGTCAGTGCTGCCCTGGCACTGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCATTTCCCCACACAGGTCAGTGCTGCCCTGGCACTGGATG  50

seq1  CCTGTGTCCTGCTTGTCACTCTGCTAGTCACTATGCTAGTCACCATCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCCTGCTTGTCACTCTGCTAGTCACTATGCTAGTCACCATCAGT  100

seq1  TAATCAGACTCCATGGCTGAGTTCCAGCCCTGGCCATGGGTTATCCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGACTCCATGGCTGAGTTCCAGCCCTGGCCATGGGTTATCCTGGT  150

seq1  CTCTGGTCTCTACTCCCCTGGCAGAGAGAGATGTTATCCCCCCCTAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTCTCTACTCCCCTGGCAGAGAGAGATGTTATCCCCCCCTAAGAG  200

seq1  TGGAGGGGGAGTTGCTAAGGAACGTTATTAGTGTGCTGAGGGCAGACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGGGAGTTGCTAAGGAACGTTATTAGTGTGCTGAGGGCAGACCAA  250

seq1  TCTCACAGAGTTTTTGGCCTCAGCCATTTGACTCTCATCAGAAAAGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAGAGTTTTTGGCCTCAGCCATTTGACTCTCATCAGAAAAGCATT  300

seq1  TTTATTTTTATTTATTTTATTTTTTATTTATTTATTTTTAAGAAAGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTATTTATTTTATTTTTTATTTATTTATTTTTAAGAAAGGTTT  350

seq1  GTCAGTGTAAGAAAGCAGGCCCATGAACTAAATTAGAATCTGAATTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGTAAGAAAGCAGGCCCATGAACTAAATTAGAATCTGAATTATTC  400

seq1  TGCTCCTACACCACATGTGCATTTCCTGGACATTTTCATCTGTTGTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTACACCACATGTGCATTTCCTGGACATTTTCATCTGTTGTCCTC  450

seq1  AAAGGTGGGTGAAGTCTACAGTGCAGAACTTGGCTCTCCAAGGTTTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGGGTGAAGTCTACAGTGCAGAACTTGGCTCTCCAAGGTTTGGGG  500

seq1  CTCGTCCTTCCTCCCCTCTTAGAGGCTGGCAGTCTTGGCAGGGGATCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCCTTCCTCCCCTCTTAGAGGCTGGCAGTCTTGGCAGGGGATCTTG  550

seq1  TCGTCTGACTTTTGGTTCTGTCTCCTCTCAGATCTTCACTTCCCACAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTGACTTTTGGTTCTGTCTCCTCTCAGATCTTCACTTCCCACAAGA  600

seq1  ATGAATTCTCAGCGTGTCTCCAGGAAATTAAAGCAATCCATTATATATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCTCAGCGTGTCTCCAGGAAATTAAAGCAATCCATTATATATTG  650

seq1  TCTCCCCATCATTGATGCAGGGATAATAGCATTTAACCCACCTTTGCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCATCATTGATGCAGGGATAATAGCATTTAACCCACCTTTGCAGT  700

seq1  ATACTGAGTGGCCTGTCAGGATCTCTTCTTTCAGAGGACAACTTGGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAGTGGCCTGTCAGGATCTCTTCTTTCAGAGGACAACTTGGAAAC  750

seq1  ACTTTAATAAATGCTCCTTAACTGCAGGCTTTAAAAAATACATGGGGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATAAATGCTCCTTAACTGCAGGCTTTAAAAAATACATGGGGTCA  800

seq1  AATGGCAAACTGGTCTGAGATAACTGCTTCAGCAAACAAGACTGGCTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAAACTGGTCTGAGATAACTGCTTCAGCAAACAAGACTGGCTGTC  850

seq1  ATTAACTCTGCTTCTTTGTCTCGTCTCTTCCTCTCTCCAATGATTCCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTCTGCTTCTTTGTCTCGTCTCTTCCTCTCTCCAATGATTCCATT  900

seq1  TCTCCAGTGACATGCTATGTCCATCTGGATGTATAGTCTTT-GGGGGAAC  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTCCAGTGACATGCTATGTCCATCTGGATGTATAGTCTTTGGGGGGAAC  950

seq1  CTCGATCCTGTTCACTGCAGATTGTTCATTCTATTCCTGCAAACATTCCT  999
      ||||||| ||||||||||||| ||||||||||||| |||| |||||||||
seq2  CTCGATCTTGTTCACTGCAGAATGTTCATTCTATT-CTGC-AACATTCCT  998

seq1  ATCTCTTAAGCTGGCAGTGGTGGAGTCGTATGACCCATTGCATCACTAGT  1049
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATCTCTTAAGCTGGCAGTGGTGGAGTCGTATGAACCATTGCATCACTAGT  1048

seq1  AAATAGACT  1058
      |||||||||
seq2  AAATAGACT  1057


seq1: chr12_5782919_5784113
seq2: B6Ng01-067M13.g_70_1255 (reverse)

seq1  TTTGTAT-TCTAGGCCACAGAAAGGAATGGGTAGCAACTCTAGTTGGGTC  49
      ||||||| |||||  ||| |||||||||||     ||||||||||||   
seq2  TTTGTATCTCTAGCACAC-GAAAGGAATGG---TGAACTCTAGTTGGTCA  46

seq1  AAGC-AAGGAGGCCAATGGGTGTTGTGGGGAGTAGGGTAGGGCTGTAGGG  98
      |||| ||||||||  ||||| ||||||||||| |  ||||||||||||||
seq2  AAGCAAAGGAGGCATATGGG-GTTGTGGGGAG-ATAGTAGGGCTGTAGGG  94

seq1  TAGAGGCAGGAATCCCAAACAGCAAGTCAGCCCTGTGCCAG-ACAAATGT  147
      |||||||||  || || ||||||||||||| |||||||||| ||||||||
seq2  TAGAGGCAG--ATTCCCAACAGCAAGTCAG-CCTGTGCCAGAACAAATGT  141

seq1  GTTCACATGGTACTGTAGGTGGTTCATCAGGTATGGGTCATTGATGGTGG  197
      ||   ||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTCACCATGGTACTGTAGGTGG-TCATCAGGTATGGGTCATTGATGGTGG  190

seq1  TCAGTACTGTGACAGTGAGGGAACTGGGCAACTTGAGCTCCTGGGTCTCA  247
      ||||||||||||||||||||||||| |||||| |||||||||||||||||
seq2  TCAGTACTGTGACAGTGAGGGAACT-GGCAAC-TGAGCTCCTGGGTCTCA  238

seq1  ATAGCTATTTGCTTCTTCCCTTTAGACAGTTTCCTGTTCTGTGTGTGCTG  297
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATAGCTATTTGC-TCTTCCCTTTAGACAGTTTCCTGTTCTGTGTGTGCTG  287

seq1  TGATTTGGGAAGTACAGTGACTGGAAGGCCTGTAATC-AAGGTGGTACTG  346
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  TGATTTGGGAAGTACAGTGACTGAAAGGCCTGTAATCAAAGGTGGTACTG  337

seq1  CCCAGAAAGTATACGGCTACTTATATTCAGGGTTATTGAACTATTCAGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAAGTATACGGCTACTTATATTCAGGGTTATTGAACTATTCAGTT  387

seq1  CATGGCTTAGGCAAAAGCCTACTTCAGTTCATGAGGCCTGAGGCGTCTTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTTAGGCAAAAGCCTACTTCAGTTCATGAGGCCTGAGGCGTCTTG  437

seq1  ATGAGTTGGTGAGAGTCACCAACTGCATCTCTTAACAGACTCAGCAGCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTGGTGAGAGTCACCAACTGCATCTCTTAACAGACTCAGCAGCAT  487

seq1  AATACCTCACAGACTCCTCCTTGTACAGATGGAGAAGCTGAGGACACACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTCACAGACTCCTCCTTGTACAGATGGAGAAGCTGAGGACACACA  537

seq1  GAGAAAATTTATCCTTGCCAGGGCCCAGGATACTTAATACTTAGGCTTTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATTTATCCTTGCCAGGGCCCAGGATACTTAATACTTAGGCTTTG  587

seq1  AATCTTTCTACAGTGGGTCACATCTTTCTTGGAGATTGGTTCGAGAATAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCTACAGTGGGTCACATCTTTCTTGGAGATTGGTTCGAGAATAA  637

seq1  TCTACATAAAGGTGCTGGTTGCATGGCTGCCACTCACAATGACACTCAGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATAAAGGTGCTGGTTGCATGGCTGCCACTCACAATGACACTCAGC  687

seq1  TATTCGTTCACTCAGCCATTTGGAAGTAATTGCAATGTGTTACATGTCAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCGTTCACTCAGCCATTTGGAAGTAATTGCAATGTGTTACATGTCAC  737

seq1  TTGGGACAAGGGACAAAGTATGAATTAGAGAGTCATTCCTTCACAGAGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACAAGGGACAAAGTATGAATTAGAGAGTCATTCCTTCACAGAGTT  787

seq1  ATTTGGTGGAAGTCAGAACTTAAACCTTTATTGGGTAAATGAAAACTGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTGGAAGTCAGAACTTAAACCTTTATTGGGTAAATGAAAACTGTG  837

seq1  TTAGAAGATGGAGAGGATAGTGGAGGAAAGTCGTTGCTCATGAAGAACAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGATGGAGAGGATAGTGGAGGAAAGTCGTTGCTCATGAAGAACAC  887

seq1  CTTTCATGGGGGAAAGAACACAGCAAAGACCCAGCAAGGACCCTCCAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGGGGGAAAGAACACAGCAAAGACCCAGCAAGGACCCTCCAAAA  937

seq1  AGGTGAGAAGAACAAGAAAAAGGGTTCCTGATTTGCTACAGCCTTCTTTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGAAGAACAAGAAAAAGGGTTCCTGATTTGCTACAGCCTTCTTTA  987

seq1  TAGCCCTTCTAGCCTGGTAATTAGCAGAAGTGGGTCTTTTTACTGTAGGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTTCTAGCCTGGTAATTAGCAGAAGTGGGTCTTTTTACTGTAGGC  1037

seq1  TGCAATTCAGAAGACCACGGAAGAGAAAGAGATGATGGAGTTCCTCTAGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTCAGAAGACCACGGAAGAGAAAGAGATGATGGAGTTCCTCTAGG  1087

seq1  GCCCAAGGAGAGACCCAAGCAAAGTTGTGACTGGTGAGATCAGGACAATG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGGAGAGACCCAAGCAAAGTTGTGACTGGTGAGATCAGGACAATG  1137

seq1  GGAAGTGAGGCTTGGCTAAGCATTGAGGAAGTGATGTCCCATGGAATTC  1195
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGAGGCTTGGCTAAGCATTGAGGAAGTGATGTCCCATGGAATTC  1186


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