BAC Information

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BAC

Clone NameB6Ng01-067O07
Chromosome12 (Build37)
Map Location 33,959,616 - 33,960,736
singlet/doubletsinglet
Overlap genenone
Upstream gene2010109K11Rik, LOC100043548, Pbef1, LOC100043553, 4933406C10Rik, Sypl, LOC100043109, 1110049B09Rik, Atxn7l4
Downstream geneAtxn7l1, 4930504H06Rik, Twistnb, LOC668801, LOC668806, Ferd3l, Twist1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067O07.bB6Ng01-067O07.g
ACCDH886640DH886641
length1,1101,161
definitionDH886640|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O07, 5' end.DH886641|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgttttgagctacccgacatgtggttcttggttccagcaat
cccgggaaactgcgattttaagccgaagtatcctgtttccattgggtaga
gcttaagtcttccacgtccaaagccagcctcctctgcagaagctgcttct
cccattgcagcccactctggcagaatcgaatgccagtggggagtctcagc
agcgcatggacactccagccagccagctctgaccctggaccccatcacct
gcctagctgagcaaagcaggctgaaatcctccatagacaagcaaaatcaa
gaggggttcacctccatactcctcggcacttacagtgaacaggctaaggt
ctgtggttggtgctatagggtttgtgccaacccaaagcacacaggctttg
ccacagcatgcacaatacagactccggcccttggcctttgtcagatactc
agtggtcggtctctctccttggctgatattttccaaaggatccactcagg
attcacttagtcttgcacaacctcataaaactgtgggattttaaagctgc
aaagacctgtggtgtgattcagcccaaattcccatcctcttttatttaca
ataatcacatctgttatttgttgaataataattagaatacaaatgatacc
aaatatttattgaatatatgctgtgtgccaagaacgtctgtaggcactct
gggtgttagcatctgcagccattacagaaaagctttaccatagagactgt
cattagtctcaatttatagatccgaaaactgggctacagagagaaaagaa
acttggccagaggattagttagcaagtggcaaaatcaggattcaaaccct
gattgtcttaacagagcccttagcccttctgctctgcaaagaccccagtg
tcaagctagggcatgggggcctggacagggatgcctagagccagaacagt
gctgtaacttcttaatgtagactcaactgtaaatacttgggggcacacac
tcatggatatgcagggcatgcatgcatgtgccaccatgcttgggtggtcc
cacactctaggttatcttcataacatctgacggcagagagacccgtgact
gaataatgtc
gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
cgatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggctcctcc
gaaaattggacatagtactaccggaggatcccgcaataccattcatatgg
gcatatatccagaagatgtcccaaccggtaagaaggacacatgctccact
atgttcatagcagccttatttataatagccagaagctggaaagaacccag
atgtcccttaacagaggaatggatacaaaaaatgtggtacatttacacaa
tgcagtactactcagctattaaaaagaatgaattcacgaaattcctaggc
aaatggttggacctggagggcatcatcctgaatgaggtaacccaatcaca
aaagaactcaaatgaaatgtactcactgataagtggatattaacccagaa
acttagtatagcgagatataaggtacaatatgtaaaacatatgaaaccga
agaagaacgaagaccaaagtgtggacactttgctcattcttagaattgga
aacaatcacccatggatggagttacagagacaaagtttggagctgagaca
aaaggatggtccatctagagactgccatatccagggatccatcccataat
tagcctccaagcgatgacaccattgcatacactagcaagcctttgttgca
ggacggtgatatagctgtcccttgtgagactaggccggggcctagcaaac
acagaagtggatgctcacagtcaactattgatggatcacagggccccaat
ggaggagctagagaaagtatcatgagctaaagagatctgcacctatcaaa
gaacacattagaactaaccagtaccccaagctctgactcagctgcatatg
tatcaaaagatgactagtcggcatcctgtaagaagcattgttcagcaaac
gttatatggcctagtacgaggaatgctcggccaaaaaagtgataggtgtg
tgtgagggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_33959616_33960736
seq2: B6Ng01-067O07.b_47_1156

seq1  GAATTCTCTTGTTTTGAGCTACCCGACATGTGGTTCTTGGTTCCAGCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGTTTTGAGCTACCCGACATGTGGTTCTTGGTTCCAGCAAT  50

seq1  CCCGGGAAACTGCGATTTTAAGCCGAAGTATCCTGTTTCCATTGGGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGAAACTGCGATTTTAAGCCGAAGTATCCTGTTTCCATTGGGTAGA  100

seq1  GCTTAAGTCTTCCACGTCCAAAGCCAGCCTCCTCTGCAGAAGCTGCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGTCTTCCACGTCCAAAGCCAGCCTCCTCTGCAGAAGCTGCTTCT  150

seq1  CCCATTGCAGCCCACTCTGGCAGAATCGAATGCCAGTGGGGAGTCTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGCAGCCCACTCTGGCAGAATCGAATGCCAGTGGGGAGTCTCAGC  200

seq1  AGCGCATGGACACTCCAGCCAGCCAGCTCTGACCCTGGACCCCATCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCATGGACACTCCAGCCAGCCAGCTCTGACCCTGGACCCCATCACCT  250

seq1  GCCTAGCTGAGCAAAGCAGGCTGAAATCCTCCATAGACAAGCAAAATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCTGAGCAAAGCAGGCTGAAATCCTCCATAGACAAGCAAAATCAA  300

seq1  GAGGGGTTCACCTCCATACTCCTCGGCACTTACAGTGAACAGGCTAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTTCACCTCCATACTCCTCGGCACTTACAGTGAACAGGCTAAGGT  350

seq1  CTGTGGTTGGTGCTATAGGGTTTGTGCCAACCCAAAGCACACAGGCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTGGTGCTATAGGGTTTGTGCCAACCCAAAGCACACAGGCTTTG  400

seq1  CCACAGCATGCACAATACAGACTCCGGCCCTTGGCCTTTGTCAGATACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCATGCACAATACAGACTCCGGCCCTTGGCCTTTGTCAGATACTC  450

seq1  AGTGGTCGGTCTCTCTCCTTGGCTGATATTTTCCAAAGGATCCACTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCGGTCTCTCTCCTTGGCTGATATTTTCCAAAGGATCCACTCAGG  500

seq1  ATTCACTTAGTCTTGCACAACCTCATAAAACTGTGGGATTTTAAAGCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTAGTCTTGCACAACCTCATAAAACTGTGGGATTTTAAAGCTGC  550

seq1  AAAGACCTGTGGTGTGATTCAGCCCAAATTCCCATCCTCTTTTATTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCTGTGGTGTGATTCAGCCCAAATTCCCATCCTCTTTTATTTACA  600

seq1  ATAATCACATCTGTTATTTGTTGAATAATAATTAGAATACAAATGATACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCACATCTGTTATTTGTTGAATAATAATTAGAATACAAATGATACC  650

seq1  AAATATTTATTGAATATATGCTGTGTGCCAAGAACGTCTGTAGGCACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTATTGAATATATGCTGTGTGCCAAGAACGTCTGTAGGCACTCT  700

seq1  GGGTGTTAGCATCTGCAGCCATTACAGAAAAGCTTTACCATAGAGACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTAGCATCTGCAGCCATTACAGAAAAGCTTTACCATAGAGACTGT  750

seq1  CATTAGTCTCAATTTATAGATCCGAAAACTGGGCTACAGAGAGAAAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTCTCAATTTATAGATCCGAAAACTGGGCTACAGAGAGAAAAGAA  800

seq1  ACTTGGCCAGAGGATTAGTTAGCAAGTGGCAAAATCAGGATTCAAACCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCCAGAGGATTAGTTAGCAAGTGGCAAAATCAGGATTCAAACCCT  850

seq1  GATTGTCTTAACAGAGCCCTTAGCCCTTCTGCTCTGCAAAGACCCCAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCTTAACAGAGCCCTTAGCCCTTCTGCTCTGCAAAGACCCCAGTG  900

seq1  TCAAGCTAGGGCATGGGGGCCTGGACAGGGATGCCTAGAGCCAAGAAACA  950
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  TCAAGCTAGGGCATGGGGGCCTGGACAGGGATGCCTAGAGCCA--GAACA  948

seq1  GTGCTGTAACTTCTTAATGTAGACTCAACTGTAAATACTTGGGGGCACAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTAACTTCTTAATGTAGACTCAACTGTAAATACTTGGGGGCACAC  998

seq1  ACACATGGATATGCAAGGGCATGCATGCATGTGCACACATGCTTGAGTGT  1050
      || ||||||||||| |||||||||||||||||||   |||||||| ||| 
seq2  ACTCATGGATATGC-AGGGCATGCATGCATGTGCCACCATGCTTGGGTGG  1047

seq1  CCACACACTTCCTAGGTTTATCTTCATAACATCTGACGGCAGAAGAGAAC  1100
       | ||||||  ||||| ||||||||||||||||||||||||| |||| ||
seq2  TCCCACACT--CTAGG-TTATCTTCATAACATCTGACGGCAG-AGAG-AC  1092

seq1  CCGTGACTGAATTAAAATGTC  1121
      ||||||||||||   ||||||
seq2  CCGTGACTGAAT---AATGTC  1110