BAC Information

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BAC

Clone NameB6Ng01-067O23
Chromosome12 (Build37)
Map Location 81,758,466 - 81,909,382
singlet/doubletdoublet
Overlap geneSlc39a9, 3830431G21Rik, Gm1568, 4933426M11Rik
Upstream geneRad51l1, LOC100041968, LOC435309, LOC100041674, LOC666754, Zfp36l1, Actn1, Wdr22, Exdl2, 2310002D06Rik, Galntl1, LOC100041715, Erh
Downstream geneSfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821, Map3k9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067O23.bB6Ng01-067O23.g
ACCDH886670DH886671
length1,082862
definitionDH886670|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O23, 5' end.DH886671|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,908,304 - 81,909,382)(81,758,466 - 81,759,328)
sequence
gaattcagtagagtgaaacaaaaggataaggaacttaaaaccagtcttga
tggtactgcaagtttgaagccactttgggcaacatgtcaaaatgtggact
caaaacaaaacaaaagcactgttctatacatgctaagccttttgtatcat
cttaccttatagtattaatttagttctgtataaatttgggacttcaccct
tttgaatgtgtcttagtccactatatctattaattcaaacctcataataa
ccatgttaaattagatcctgctaaaaggaaaaaccactagccaaaggata
ggaactgaatacacagcaatccccctccttaggtcagggacctgtctcca
ccatctgtgaatatcctcccacctccactcccacccccactagcagaaac
tcaataaatccatgttaaatcagactgactacacagctgtcaggctatga
acagaacaactccagccctgtagccagaggatgggcaacaaacaggaatc
aacattcctgggcattcctaacttgagaacagacaagaggggtactattc
ccaagccagactccaactcattcctgaaagggaagggagcagccagaggt
cactcagagggaaatgtcagtattgccccctgcacaaatgacctctgaag
cagtagggagccaggctaatgtaatgagacattatacaggccctcccatc
aggccaaatggggatccatagatgtttcagatgcatataatgctgccttg
ctaattgaaatgggagttgcctttttacagagcttaggccagtcaataaa
taacaggaaccaaaaggcttttcggtaggggcttaactgccctttcctat
ctggtcctttatgcctcaagcaaaccctagggaacatccctcagacgaga
ctatcctccaatagtacacattcaccccaagaaataaaccccaacttctc
tttttctacctttagtctggtttggttggtctttccctcccattcacttc
atctaatccaattccaacaccctttatttgatcctacctctaccctcttc
cggcccccccccaaataaattgtctcccctcc
gaattcagttgtgtagaccaggctggcctcgaatttagagatccacctgc
ctctgtctcctgagtattggtgttaaagtatttgccaccactgcttggcc
ttctgttttaatttttaacatggttgagtaggtgatatatgtataatttt
atattttcctttttgtttgggaattatttccttatcatttccctttattg
ttcaaatttaatatagccattttcaaatgtcttcactagattcagtcatt
tattaatgctgaaattcttgtgtattcatttgttcttgatgtgatagatt
gagtgaatttttttatgtctaaaactgtggccatatttcaagttttaaga
atagaataataaaggtgggaggtggtggcccacgcctctaatctcagcac
tgggaggcagaggcaggcagatcgctgtgagttccaggacagcctctggt
ctacagagggagttccaggacagtgaggacaacaccaaagaaaccctgtc
tcaaaaaaacagtggaataatggagccaggtgttgtggcctggcacaccc
cttggaggcagatgcaggtgaatctctgtgagttggggactagcttggtg
tacactgagttcaagacagaagggctgcatagtggagagaccctgtctcc
aaacaaaaaacaaaaagaaaaagagaaaaagaaaaaagaaaaagtaggat
gatgggtcagagggcataaatgtctctaaaaagtttcttaatgttttaga
atatatttgtccaacaaatgcaaatgatactttatttccatagtatttgt
tgtttgttttttaaatatcttttgataaggaagagatattttttatgttt
tagtctgtcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_81908304_81909382
seq2: B6Ng01-067O23.b_47_1128 (reverse)

seq1  GGAGAGGGAGACAA-TTATCTGGGGGGGGGC--GGAGAGGGTAGAGGTAG  47
      |||| ||||||||| |||| |||||||||||  | |||||||||||||||
seq2  GGAG-GGGAGACAATTTATTTGGGGGGGGGCCGGAAGAGGGTAGAGGTAG  49

seq1  GATCAAAT-AAGGGTGTTTGGAATTGGATTTAGATGAAGTGAATGGGAAG  96
      |||||||| ||||||| ||||||||||| ||||||||||||||||||| |
seq2  GATCAAATAAAGGGTG-TTGGAATTGGA-TTAGATGAAGTGAATGGGAGG  97

seq1  GAAAGACCAACAAAACCAGACTAAA-GTAGAAAAAGAGAAGTTGGGGTGT  145
      ||||||||||| ||||||||||||| |||||||||||||||||||||| |
seq2  GAAAGACCAACCAAACCAGACTAAAGGTAGAAAAAGAGAAGTTGGGGTTT  147

seq1  ATTTCTTGGGGTGAATGTGTACTATTGGAGGATAGTTCTCGTCTGAGGGA  195
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTTCTTGGGGTGAATGTGTACTATTGGAGGATAG-TCTCGTCTGAGGGA  196

seq1  TGTTCCCTAGGGTTTGCTTGAGGCATAAAGGACCAGATAGGGAAGGGCAG  245
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTTCCCTAGGGTTTGCTTGAGGCATAAAGGACCAGATAGGAAAGGGCAG  246

seq1  TTAAGCCCCTACCG-AAAGCCTTTTGGTTCCTGTTATTTATTGACTGGCC  294
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTAAGCCCCTACCGAAAAGCCTTTTGGTTCCTGTTATTTATTGACTGGCC  296

seq1  TAAGCTCTGT-AAAAGGCAACTCCCATTTCAATTAGCAAGGCAGCATTAT  343
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCTGTAAAAAGGCAACTCCCATTTCAATTAGCAAGGCAGCATTAT  346

seq1  ATGCATCTGAAACATCTATGGATCCCCATTTGGCCTGATGGGAGGGCCTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCTGAAACATCTATGGATCCCCATTTGGCCTGATGGGAGGGCCTG  396

seq1  TATAATGTCTCATTACATTAGCCTGGCTCCCTACTGCTTCAGAGGTCATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGTCTCATTACATTAGCCTGGCTCCCTACTGCTTCAGAGGTCATT  446

seq1  TGTGCAGGGGGCAATACTGACATTTCCCTCTGAGTGACCTCTGGCTGCTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGGGGCAATACTGACATTTCCCTCTGAGTGACCTCTGGCTGCTC  496

seq1  CCTTCCCTTTCAGGAATGAGTTGGAGTCTGGCTTGGGAATAGTACCCCTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTTTCAGGAATGAGTTGGAGTCTGGCTTGGGAATAGTACCCCTC  546

seq1  TTGTCTGTTCTCAAGTTAGGAATGCCCAGGAATGTTGATTCCTGTTTGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTTCTCAAGTTAGGAATGCCCAGGAATGTTGATTCCTGTTTGTT  596

seq1  GCCCATCCTCTGGCTACAGGGCTGGAGTTGTTCTGTTCATAGCCTGACAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCCTCTGGCTACAGGGCTGGAGTTGTTCTGTTCATAGCCTGACAG  646

seq1  CTGTGTAGTCAGTCTGATTTAACATGGATTTATTGAGTTTCTGCTAGTGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGTCAGTCTGATTTAACATGGATTTATTGAGTTTCTGCTAGTGG  696

seq1  GGGTGGGAGTGGAGGTGGGAGGATATTCACAGATGGTGGAGACAGGTCCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAGTGGAGGTGGGAGGATATTCACAGATGGTGGAGACAGGTCCC  746

seq1  TGACCTAAGGAGGGGGATTGCTGTGTATTCAGTTCCTATCCTTTGGCTAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTAAGGAGGGGGATTGCTGTGTATTCAGTTCCTATCCTTTGGCTAG  796

seq1  TGGTTTTTCCTTTTAGCAGGATCTAATTTAACATGGTTATTATGAGGTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTCCTTTTAGCAGGATCTAATTTAACATGGTTATTATGAGGTTT  846

seq1  GAATTAATAGATATAGTGGACTAAGACACATTCAAAAGGGTGAAGTCCCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAATAGATATAGTGGACTAAGACACATTCAAAAGGGTGAAGTCCCA  896

seq1  AATTTATACAGAACTAAATTAATACTATAAGGTAAGATGATACAAAAGGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATACAGAACTAAATTAATACTATAAGGTAAGATGATACAAAAGGC  946

seq1  TTAGCATGTATAGAACAGTGCTTTTGTTTTGTTTTGAGTCCACATTTTGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATGTATAGAACAGTGCTTTTGTTTTGTTTTGAGTCCACATTTTGA  996

seq1  CATGTTGCCCAAAGTGGCTTCAAACTTGCAGTACCATCAAGACTGGTTTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGCCCAAAGTGGCTTCAAACTTGCAGTACCATCAAGACTGGTTTT  1046

seq1  AAGTTCCTTATCCTTTTGTTTCACTCTACTGAATTC  1079
      ||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTTATCCTTTTGTTTCACTCTACTGAATTC  1082

seq1: chr12_81758466_81759328
seq2: B6Ng01-067O23.g_67_928

seq1  GAATTCAGTTGTGTAGACCAGGCTGGCCTCGAATTTAGAGATCCACCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTGTAGACCAGGCTGGCCTCGAATTTAGAGATCCACCTGC  50

seq1  CTCTGTCTCCTGAGTATTGGTGTTAAAGTATTTGCCACCACTGCTTGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCCTGAGTATTGGTGTTAAAGTATTTGCCACCACTGCTTGGCC  100

seq1  TTCTGTTTTAATTTTTAACATGGTTGAGTAGGTGATATATGTATAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTAATTTTTAACATGGTTGAGTAGGTGATATATGTATAATTTT  150

seq1  ATATTTTCCTTTTTGTTTGGGAATTATTTCCTTATCATTTCCCTTTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCCTTTTTGTTTGGGAATTATTTCCTTATCATTTCCCTTTATTG  200

seq1  TTCAAATTTAATATAGCCATTTTCAAATGTCTTCACTAGATTCAGTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTTAATATAGCCATTTTCAAATGTCTTCACTAGATTCAGTCATT  250

seq1  TATTAATGCTGAAATTCTTGTGTATTCATTTGTTCTTGATGTGATAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGCTGAAATTCTTGTGTATTCATTTGTTCTTGATGTGATAGATT  300

seq1  GAGTGAATTTTTTTATGTCTAAAACTGTGGCCATATTTCAAGTTTTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAATTTTTTTATGTCTAAAACTGTGGCCATATTTCAAGTTTTAAGA  350

seq1  ATAGAATAATAAAGGTGGGAGGTGGTGGCCCACGCCTCTAATCTCAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATAATAAAGGTGGGAGGTGGTGGCCCACGCCTCTAATCTCAGCAC  400

seq1  TGGGAGGCAGAGGCAGGCAGATCGCTGTGAGTTCCAGGACAGCCTCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGAGGCAGGCAGATCGCTGTGAGTTCCAGGACAGCCTCTGGT  450

seq1  CTACAGAGGGAGTTCCAGGACAGTGAGGACAACACCAAAGAAACCCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAGGGAGTTCCAGGACAGTGAGGACAACACCAAAGAAACCCTGTC  500

seq1  TCAAAAAAACAGTGGAATAATGGAGCCAGGTGTTGTGGCCTGGCACACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAACAGTGGAATAATGGAGCCAGGTGTTGTGGCCTGGCACACCC  550

seq1  CTTGGAGGCAGATGCAGGTGAATCTCTGTGAGTTGGGGACTAGCTTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGGCAGATGCAGGTGAATCTCTGTGAGTTGGGGACTAGCTTGGTG  600

seq1  TACACTGAGTTCAAGACAGAAGGGCTGCATAGTGGAGAGACCCTGTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGAGTTCAAGACAGAAGGGCTGCATAGTGGAGAGACCCTGTCTCC  650

seq1  AAACAAAAAACAAAAAGAAAAAGAGAAAAAGAAAAAAGAAAAAGTAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAACAAAAAGAAAAAGAGAAAAAGAAAAAAGAAAAAGTAGGAT  700

seq1  GATGGGTCAGAGGGCATAAATGTCTCTAAAAAGTTTCTTAATGTTTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GATGGGTCAGAGGGCATAAATGTCTCTAAAAAGTTTCTTAATGTTTT-AG  749

seq1  AATATATTTGTCCAACAAATGCAAATGATACTTTATTTCCATAGTATTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTTGTCCAACAAATGCAAATGATACTTTATTTCCATAGTATTTG  799

seq1  TTGTTTGTTTTTAAAATATC-TTTGATAAGGAAGAGATATTTTTATTGTT  849
      |||||||||||| ||||||| |||||||||||||||||||||||  ||||
seq2  TTGTTTGTTTTTTAAATATCTTTTGATAAGGAAGAGATATTTTTTATGTT  849

seq1  TTAGTCTGTTCAGT  863
      |||||||| |||||
seq2  TTAGTCTG-TCAGT  862