BAC Information

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BAC

Clone NameB6Ng01-068M07
Chromosome12 (Build37)
Map Location 120,456,919 - 120,615,470
singlet/doubletdoublet
Overlap geneItgb8, EG627557, LOC100043011
Upstream geneSp4, LOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5
Downstream gene4732474O15Rik, LOC668632, LOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068M07.bB6Ng01-068M07.g
ACCDH887260DH887261
length1,1611,030
definitionDH887260|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M07, 5' end.DH887261|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,456,919 - 120,458,091)(120,614,434 - 120,615,470)
sequence
gaattcagcttgcttttaattctgtaaacctgtgtgtctgtttctgtgtg
tgacttttacacttatcgtttgtaaaaggtttcttgttttcactatacca
aacgcctcactcaagtcagatggccagtgaacttcttcgtattctcctat
ctctgcctcccatcttgccactggtataatgagactacagacatacatta
ttagcctggttttatgtgaattcatgggatctgaactcaggtcctcatgc
ttgtgcccaacaagccaagccatgtcccacttctcagtccagaatttggt
tttaaataaaataaacaagaaaatgaataaaaacctatggtgatgaagtt
cagttagaaatggttttcttcacactgcatttcaaaagtctggatcctgt
cacttgaaaagtcaaatctatattcaccttcaaatacaattaaggaaaac
taacacaataaaaattcatcctgcaattaccccatgttgggctctatatt
gagcctcaatgatggtaaaaaaaaaatcctttgagggtggcactgctgtc
ctgtttttttggatggtgagagaaagtctagagaagctaattctcaaccc
aatgtcatccagctactgtgcccgggaacaggcatggtaggcccttgtga
ctactgagcattttcccgagaagacagccccctgccccatgcagttgaga
acaacagaaagacaattccctcaaagctactggattttatttactggatt
ttactggagttattaatgttagtccttaagtgaaaactcagtaaccccag
gcaccctaaggcatagcttaaatacaagcacccggtcagcagttttccta
tcatccaccttaaagtcagctcattctccgactctaaagtgaggatgcta
cattccccagaagtgttagtattttcaatgcctaccagccccctacatgc
ttccgccctttgcaagaatcatttttttttctatgctcagatactatgag
tttagcttgaaagttctgcctgaacctcttgctgagaaatgaatcagtct
gctgctagtgctagtgggggggaaggctggatcctcttttccactgttcc
ctgaccctgccagggaatgcctcgagttgcttactattagccaaagcata
aagtgcctgct
gaattctctaaccaccatgcctcatgcttaaaggtagagaaaatcagaac
atgagctgtatagcttgtatagattgtacttcagaaagggatttcagttt
ttgattcattttaggggactgaacttctagtttctctggtctgcttgaaa
gagaactgaaagagagaatacaggggtgagagaaggccaaagagagctgc
tttctactacatcctggaaatcagcaaatcagccagacaagggcccatgc
ttcaaggtgtggtattctgagatctgaaacaatcaatgtacaacaatgtt
ctgctactactcaaaggactcaatataccttttcagcagatgcaataaac
tagacacatgttatcatggtcttaattttgtcaaatttactatggtgata
tttgataccacctttctggaactcctaatgtttcaacactccaagagtta
ttctgtatattttaaaataaatattttgtaaaaatggtgtaaatgcacca
cttagtgaggcgggtatgactacaaaaattatttacaatactttagggaa
agtttcaggattccaaagaagaaattaaactgagaaaagtccctttcatt
tttactagtgagctgatgaaagtaatcattctgaaatgtgagagagacct
gggattcatttgtatgtgtcattatgcctaaaaggtaacccacacaatat
aaaaaattgcttccacaaatttaagattcttacagaggcagttgtggtat
caccacacaattttcatttcatatttatgctgttgatattgatttgccct
ctggtcgtttttctggcagactttcccagcatcattgttacctgtcaagg
ctgtgatgaactattatatttttaaaaagtagaaacgtgaattccaagaa
aattcactatctaaagtgttaggattagaatagactggtacctcataacc
aacattagattatcagctactgctctcacataaagtcaggaattgttggc
ttatgttgcttggaactttgtaggagatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120456919_120458091
seq2: B6Ng01-068M07.b_46_1206

seq1  GAATTCAGCTTGCTTTTAATTCTGTAAACCTGTGTGTCTGTTTCTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTGCTTTTAATTCTGTAAACCTGTGTGTCTGTTTCTGTGTG  50

seq1  TGACTTTTACACTTATCGTTTGTAAAAGGTTTCTTGTTTTCACTATACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTACACTTATCGTTTGTAAAAGGTTTCTTGTTTTCACTATACCA  100

seq1  AACGCCTCACTCAAGTCAGATGGCCAGTGAACTTCTTCGTATTCTCCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCTCACTCAAGTCAGATGGCCAGTGAACTTCTTCGTATTCTCCTAT  150

seq1  CTCTGCCTCCCATCTTGCCACTGGTATAATGAGACTACAGACATACATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCCATCTTGCCACTGGTATAATGAGACTACAGACATACATTA  200

seq1  TTAGCCTGGTTTTATGTGAATTCATGGGATCTGAACTCAGGTCCTCATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTGGTTTTATGTGAATTCATGGGATCTGAACTCAGGTCCTCATGC  250

seq1  TTGTGCCCAACAAGCCAAGCCATGTCCCACTTCTCAGTCCAGAATTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCCAACAAGCCAAGCCATGTCCCACTTCTCAGTCCAGAATTTGGT  300

seq1  TTTAAATAAAATAAACAAGAAAATGAATAAAAACCTATGGTGATGAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAAAATAAACAAGAAAATGAATAAAAACCTATGGTGATGAAGTT  350

seq1  CAGTTAGAAATGGTTTTCTTCACACTGCATTTCAAAAGTCTGGATCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGAAATGGTTTTCTTCACACTGCATTTCAAAAGTCTGGATCCTGT  400

seq1  CACTTGAAAAGTCAAATCTATATTCACCTTCAAATACAATTAAGGAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAAAAGTCAAATCTATATTCACCTTCAAATACAATTAAGGAAAAC  450

seq1  TAACACAATAAAAATTCATCCTGCAATTACCCCATGTTGGGCTCTATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAATAAAAATTCATCCTGCAATTACCCCATGTTGGGCTCTATATT  500

seq1  GAGCCTCAATGATGGTAAAAAAAAAATCCTTTGAGGGTGGCACTGCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCAATGATGGTAAAAAAAAAATCCTTTGAGGGTGGCACTGCTGTC  550

seq1  CTGTTTTTTTGGATGGTGAGAGAAAGTCTAGAGAAGCTAATTCTCAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTTTGGATGGTGAGAGAAAGTCTAGAGAAGCTAATTCTCAACCC  600

seq1  AATGTCATCCAGCTACTGTGCCCGGGAACAGGCATGGTAGGCCCTTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATCCAGCTACTGTGCCCGGGAACAGGCATGGTAGGCCCTTGTGA  650

seq1  CTACTGAGCATTTTCCCGAGAAGACAGCCCCCTGCCCCATGCAGTTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGCATTTTCCCGAGAAGACAGCCCCCTGCCCCATGCAGTTGAGA  700

seq1  ACAACAGAAAGACAATTCCCTCAAAGCTACTGGATTTTATTTACTGGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGAAAGACAATTCCCTCAAAGCTACTGGATTTTATTTACTGGATT  750

seq1  TTACTGGAGTTATTAATGTTAGTCCTTAAGTGAAAACTCAGTAACCCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGAGTTATTAATGTTAGTCCTTAAGTGAAAACTCAGTAACCCCAG  800

seq1  GCACCCTAAGGCATAGCTTAAATACAAGCACCCGGTCAGCAGTTTTCCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTAAGGCATAGCTTAAATACAAGCACCCGGTCAGCAGTTTTCCTA  850

seq1  TCATCCACCTTAAAGTCAGCTCATTCTCCGACTCTAAAAGTGAGGATGCT  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCATCCACCTTAAAGTCAGCTCATTCTCCGACTCT-AAAGTGAGGATGCT  899

seq1  ACATTCCCCAGAAGGTGTTTAGTATTTTCAATGCCTACCAGCCCCCTACA  950
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  ACATTCCCCAGAA-GTG-TTAGTATTTTCAATGCCTACCAGCCCCCTACA  947

seq1  TGCTTCCGCCCTTTGCAAGAATCATTTTTTTTTCTATGCTCAGGATAACT  1000
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  TGCTTCCGCCCTTTGCAAGAATCATTTTTTTTTCTATGCTCA-GAT-ACT  995

seq1  ATGAGTTTTAGCTTGAAAGTTCTGCCTGAACCTCTTGCTGAGACATGAAT  1050
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATGAG-TTTAGCTTGAAAGTTCTGCCTGAACCTCTTGCTGAGAAATGAAT  1044

seq1  CAGGTCTGCTGGCTAGTGCTTAGTGGGGGGG-AGGCTGGATCCTCTTTTC  1099
      || ||||||| |||||||| ||||||||||| ||||||||||||||||||
seq2  CA-GTCTGCT-GCTAGTGC-TAGTGGGGGGGAAGGCTGGATCCTCTTTTC  1091

seq1  AACTGTTTCCCTGACCTCTTGCCAGGAGATGCTCTGAGTTGCTTACTAAT  1149
       |||| |||||||||  | |||||||  ||||   |||||||||||| ||
seq2  CACTG-TTCCCTGAC--CCTGCCAGGGAATGCCTCGAGTTGCTTACT-AT  1137

seq1  TAGGCAAAAGCATAAAGTG-CTGCT  1173
      || || ||||||||||||| |||||
seq2  TA-GCCAAAGCATAAAGTGCCTGCT  1161

seq1: chr12_120614434_120615470
seq2: B6Ng01-068M07.g_71_1100 (reverse)

seq1  TCATCCTCCTACAATAGTTCCACAGCAACATAAGCCAACAAATTCCTGAC  50
      |||| ||||||||| ||||||| |||||||||||||||| ||||||||||
seq2  TCAT-CTCCTACAA-AGTTCCA-AGCAACATAAGCCAAC-AATTCCTGAC  46

seq1  TTTTATGTGAGAGCAGTAGCTGTATAATCTAATGTTTGGTTATTGAGGTA  100
       ||||||||||||||||||||| ||||||||||| ||||||| |||||||
seq2  -TTTATGTGAGAGCAGTAGCTG-ATAATCTAATG-TTGGTTA-TGAGGTA  92

seq1  CCAGTCTGATTCTAAATCCTAAACACTTTAGATAGTG-ATTTTCTTGGAA  149
      ||||||| ||||| |||||| |||||||||||||||| ||||||||||||
seq2  CCAGTCT-ATTCT-AATCCT-AACACTTTAGATAGTGAATTTTCTTGGAA  139

seq1  TTCACGTTTCTACTTTTTAAAAATATAATAGTTCATCACAGCCTTGACAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGTTTCTACTTTTTAAAAATATAATAGTTCATCACAGCCTTGACAG  189

seq1  GTAACAATGATGCTGGGAAAGTCTGCCAGAAAAACGACCAGAGGGCAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAATGATGCTGGGAAAGTCTGCCAGAAAAACGACCAGAGGGCAAAT  239

seq1  CAATATCAACAGCATAAATATGAAATG-AAATTGTGTGGTGATACCACAA  298
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAATATCAACAGCATAAATATGAAATGAAAATTGTGTGGTGATACCACAA  289

seq1  CTGCCTCTGTAAGAATCTTAAATTTGTGG-AGCAATTTTTTATATTGTGT  347
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGCCTCTGTAAGAATCTTAAATTTGTGGAAGCAATTTTTTATATTGTGT  339

seq1  GGGTTACC-TTTAGGCATAATGACACATACAAATGAATCCCAGGTCTCTC  396
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACCTTTTAGGCATAATGACACATACAAATGAATCCCAGGTCTCTC  389

seq1  TCACATTTCAGAATGATTACTTTCATCAGCTCACTAGTAAAAATGAAAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTCAGAATGATTACTTTCATCAGCTCACTAGTAAAAATGAAAGG  439

seq1  GACTTTTCTCAGTTTAATTTCTTCTTTGGAATCCTGAAACTTTCCCTAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTCTCAGTTTAATTTCTTCTTTGGAATCCTGAAACTTTCCCTAAA  489

seq1  GTATTGTAAATAATTTTTGTAGTCATACCCGCCTCACTAAGTGGTGCATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTAAATAATTTTTGTAGTCATACCCGCCTCACTAAGTGGTGCATT  539

seq1  TACACCATTTTTACAAAATATTTATTTTAAAATATACAGAATAACTCTTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCATTTTTACAAAATATTTATTTTAAAATATACAGAATAACTCTTG  589

seq1  GAGTGTTGAAACATTAGGAGTTCCAGAAAGGTGGTATCAAATATCACCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTGAAACATTAGGAGTTCCAGAAAGGTGGTATCAAATATCACCAT  639

seq1  AGTAAATTTGACAAAATTAAGACCATGATAACATGTGTCTAGTTTATTGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATTTGACAAAATTAAGACCATGATAACATGTGTCTAGTTTATTGC  689

seq1  ATCTGCTGAAAAGGTATATTGAGTCCTTTGAGTAGTAGCAGAACATTGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTGAAAAGGTATATTGAGTCCTTTGAGTAGTAGCAGAACATTGTT  739

seq1  GTACATTGATTGTTTCAGATCTCAGAATACCACACCTTGAAGCATGGGCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTGATTGTTTCAGATCTCAGAATACCACACCTTGAAGCATGGGCC  789

seq1  CTTGTCTGGCTGATTTGCTGATTTCCAGGATGTAGTAGAAAGCAGCTCTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTGGCTGATTTGCTGATTTCCAGGATGTAGTAGAAAGCAGCTCTC  839

seq1  TTTGGCCTTCTCTCACCCCTGTATTCTCTCTTTCAGTTCTCTTTCAAGCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTTCTCTCACCCCTGTATTCTCTCTTTCAGTTCTCTTTCAAGCA  889

seq1  GACCAGAGAAACTAGAAGTTCAGTCCCCTAAAATGAATCAAAAACTGAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAGAAACTAGAAGTTCAGTCCCCTAAAATGAATCAAAAACTGAAA  939

seq1  TCCCTTTCTGAAGTACAATCTATACAAGCTATACAGCTCATGTTCTGATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCTGAAGTACAATCTATACAAGCTATACAGCTCATGTTCTGATT  989

seq1  TTCTCTACCTTTAAGCATGAGGCATGGTGGTTAGAGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTACCTTTAAGCATGAGGCATGGTGGTTAGAGAATTC  1030