BAC Information

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BAC

Clone NameB6Ng01-073K24
Chromosome12 (Build37)
Map Location 86,217,530 - 86,356,378
singlet/doubletdoublet
Overlap gene1110018G07Rik, Fcf1, Ylpm1
Upstream gene2410016O06Rik, Acot2, Acot1, Acot4, Acot3, Acot5, LOC666963, Acot6, Dnalc1, Pnma1, C130039O16Rik, EG432676, Zadh1, Zfp410, 9830169C18Rik, Coq6, Entpd5, 2900006K08Rik, Rnf113a2, Aldh6a1, Lin52, Chx10, Abcd4, 7420416P09Rik, Tmem90a, Npc2, Isca2, Ltbp2
Downstream geneProx2, Dlst, Rps6kl1, LOC100042021, Pgf, Eif2b2, Mlh3, Acyp1, 2810002I04Rik, Nek9, Tmed10, LOC100042549, LOC667119, Fos, EG667124, Jundm2, LOC100042073, Batf, BC011209, 0610007P14Rik, Ttll5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073K24.bB6Ng01-073K24.g
ACCDH890740DH890741
length1,164225
definitionDH890740|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K24, 5' end.DH890741|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,217,530 - 86,218,709)(86,356,154 - 86,356,378)
sequence
gaattccagcaacaccctctttggcaccgagaagcgagcgggcggcgagg
ggattaacccgtgaggagctgcgggcgacagggcagacccggggactgga
aagacagatggcgtctgcctggaccagcgcacctgagctgcctttttcct
gtcctgggcaaactcaagttgtccacctgtcctggatgtattttctgttc
ctgacctcacggacccagatgaactgcttctcgggcctgaaggaagctgg
ggaaggtacccagaccggagtaatggggaccgagcccgaggcatgcgcgc
ctggtctcgttgcttccacctctgaccgctgggggcgctaggcgagaatg
caggtgtccctggggcagctcccaagagccggttgcctatggggaagggc
aacttggggcgcgcgccccctggtggagctggtcacacccttggccaccg
tgttttgtagcgacacactctgccaacctgcttagagcctagatcttaat
ctgcttcctgtggcgccaagccttgacctgggcctatggtgatggtggat
gcccgctggaagagttgttctctttttacaaaggtaggcatggagcctct
tgaataaggtgactaaaggagagtattgctaaagatggaaataaaaccca
ggctagtggcctctggcccacagtccactctttgaactcctaccaccgcc
cctcattccttggagaatttccccaaggggctgcatgagcctttgagccc
tgctgggccgggttctcacaccttcttgtattgaaaggggacagggatgt
ccgttgcctcccacctaaattaaccttcttccctgtgtcccatgccccaa
agcctaaaaggctaggcatatatgggtttcctgaagtgttttcacagcct
actggctcctatgcagacaggataaagagcctgtaaaggcaccattacaa
cttcccataccagccctccctcccagattcttagtatacctactggatta
gaagtctcatatttgacactggcctacgagtcctccttgcccgctgtttt
ctgacgatctgaacttactcttgctcgattcattacacagtaccctacag
tctctgcttgcaatgttttgtatgcattgtgacggctcacttcctctact
gaggtattcatctc
acttgttctgactgaggtggagggtgatatggtgaaggtggggtcgatcc
aaaagacacaggtgtgggaagcagtgcttgtctaggtttctctgggatct
gtgagttctgagaaccagaagctggtggaagtggggctgttaactgagga
ggcatcccttgtggagctccagggggaggtattcctgggggaggtgtggc
tgaagataatggtgggaggggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_86217530_86218709
seq2: B6Ng01-073K24.b_42_1205

seq1  GAATTCCAGCAACACCCTCTTTGGCACCGAGAAGCGAGCGGGCGGCGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCAACACCCTCTTTGGCACCGAGAAGCGAGCGGGCGGCGAGG  50

seq1  GGATTAACCCGTGAGGAGCTGCGGGCGACAGGGCAGACCCGGGGACTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAACCCGTGAGGAGCTGCGGGCGACAGGGCAGACCCGGGGACTGGA  100

seq1  AAGACAGATGGCGTCTGCCTGGACCAGCGCACCTGAGCTGCCTTTTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGATGGCGTCTGCCTGGACCAGCGCACCTGAGCTGCCTTTTTCCT  150

seq1  GTCCTGGGCAAACTCAAGTTGTCCACCTGTCCTGGATGTATTTTCTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGGCAAACTCAAGTTGTCCACCTGTCCTGGATGTATTTTCTGTTC  200

seq1  CTGACCTCACGGACCCAGATGAACTGCTTCTCGGGCCTGAAGGAAGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTCACGGACCCAGATGAACTGCTTCTCGGGCCTGAAGGAAGCTGG  250

seq1  GGAAGGTACCCAGACCGGAGTAATGGGGACCGAGCCCGAGGCATGCGCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTACCCAGACCGGAGTAATGGGGACCGAGCCCGAGGCATGCGCGC  300

seq1  CTGGTCTCGTTGCTTCCACCTCTGACCGCTGGGGGCGCTAGGCGAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTCGTTGCTTCCACCTCTGACCGCTGGGGGCGCTAGGCGAGAATG  350

seq1  CAGGTGTCCCTGGGGCAGCTCCCAAGAGCCGGTTGCCTATGGGGAAGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCCCTGGGGCAGCTCCCAAGAGCCGGTTGCCTATGGGGAAGGGC  400

seq1  AACTTGGGGCGCGCGCCCCCTGGTGGAGCTGGTCACACCCTTGGCCACCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGGGCGCGCGCCCCCTGGTGGAGCTGGTCACACCCTTGGCCACCG  450

seq1  TGTTTTGTAGCGACACACTCTGCCAACCTGCTTAGAGCCTAGATCTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTAGCGACACACTCTGCCAACCTGCTTAGAGCCTAGATCTTAAT  500

seq1  CTGCTTCCTGTGGCGCCAAGCCTTGACCTGGGCCTATGGTGATGGTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCTGTGGCGCCAAGCCTTGACCTGGGCCTATGGTGATGGTGGAT  550

seq1  GCCCGCTGGAAGAGTTGTTCTCTTTTTACAAAGGTAGGCATGGAGCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGCTGGAAGAGTTGTTCTCTTTTTACAAAGGTAGGCATGGAGCCTCT  600

seq1  TGAATAAGGTGACTAAAGGAGAGTATTGCTAAAGATGGAAATAAAACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGGTGACTAAAGGAGAGTATTGCTAAAGATGGAAATAAAACCCA  650

seq1  GGCTAGTGGCCTCTGGCCCACAGTCCACTCTTTGAACTCCTACCACCGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGTGGCCTCTGGCCCACAGTCCACTCTTTGAACTCCTACCACCGCC  700

seq1  CCTCATTCCTTGGAGAATTTCCCCAAGGGGCTGCATGAGCCTTTGAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTCCTTGGAGAATTTCCCCAAGGGGCTGCATGAGCCTTTGAGCCC  750

seq1  TGCTGGGCCGGGTTCTCACACCTTCTTGTATTG-AAGGGGACAGGGATGT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCTGGGCCGGGTTCTCACACCTTCTTGTATTGAAAGGGGACAGGGATGT  800

seq1  CCGTTGCCTCCCACCTAAATTAACCTTCTTCCCTGTGTCCCATGCCCCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTGCCTCCCACCTAAATTAACCTTCTTCCCTGTGTCCCATGCCCCAA  850

seq1  AGCCTAAAAGGCTAGGCATATATGGTTTTCCTGAAAGTGTTTTCACAGCC  899
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  AGCCTAAAAGGCTAGGCATATATGGGTTTCCTG-AAGTGTTTTCACAGCC  899

seq1  TACTGGCTCCTAAGCAGACAGGATAAAAGAGCCTGTAAAGGCACCAATTA  949
      |||||||||||| ||||||||||| |||||||||||||||||||| ||||
seq2  TACTGGCTCCTATGCAGACAGGAT-AAAGAGCCTGTAAAGGCACC-ATTA  947

seq1  CAACTTCCCATACCAGCCCCTCCCTTCCCAGAATCCTAAGTAATACCTAA  999
      |||||||||||||||| ||||||| |||||| || || ||| |||||| |
seq2  CAACTTCCCATACCAG-CCCTCCC-TCCCAG-ATTCTTAGT-ATACCT-A  992

seq1  CTGGATTAGAAAGTCTCAATATTTGACACTGGCCTACGGAGTCCTCCCTG  1049
      ||||||||| ||||||| ||||||||||||||||||| ||||||||| ||
seq2  CTGGATTAG-AAGTCTC-ATATTTGACACTGGCCTAC-GAGTCCTCCTTG  1039

seq1  CCCGGCTGGTTTTCTGACCGATCTGAACTTACTCCTGCTCGGTATTCATT  1099
      ||| ||| ||||||||| |||||||||||||||| ||||||  |||||||
seq2  CCC-GCT-GTTTTCTGA-CGATCTGAACTTACTCTTGCTCG--ATTCATT  1084

seq1  ACACAGTACCCTCACAGTCTCTGCTTGGCAAATGTTT--GATGCATTGTG  1147
      |||||||||||| ||||||||||||||   |||||||   ||||||||||
seq2  ACACAGTACCCT-ACAGTCTCTGCTTG--CAATGTTTTGTATGCATTGTG  1131

seq1  ACGGCTCA-TCTCTCTACCTAGAGTATTCATCTC  1180
      |||||||| |  ||||||  || |||||||||||
seq2  ACGGCTCACTTCCTCTACTGAG-GTATTCATCTC  1164

seq1: chr12_86356154_86356378
seq2: B6Ng01-073K24.g_75_299 (reverse)

seq1  CCTACCCCTCCCACCATTATCTTCAGCCACACCTCCCCCAGGAATACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCCTCCCACCATTATCTTCAGCCACACCTCCCCCAGGAATACCTC  50

seq1  CCCCTGGAGCTCCACAAGGGATGCCTCCTCAGTTAACAGCCCCACTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGAGCTCCACAAGGGATGCCTCCTCAGTTAACAGCCCCACTTCCA  100

seq1  CCAGCTTCTGGTTCTCAGAACTCACAGATCCCAGAGAAACCTAGACAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTCTGGTTCTCAGAACTCACAGATCCCAGAGAAACCTAGACAAGC  150

seq1  ACTGCTTCCCACACCTGTGTCTTTTGGATCGACCCCACCTTCACCATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTCCCACACCTGTGTCTTTTGGATCGACCCCACCTTCACCATATC  200

seq1  ACCCTCCACCTCAGTCAGAACAAGT  225
      |||||||||||||||||||||||||
seq2  ACCCTCCACCTCAGTCAGAACAAGT  225