BAC Information

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BAC

Clone NameB6Ng01-073O04
Chromosome12 (Build37)
Map Location 72,396,359 - 72,516,707
singlet/doubletdoublet
Overlap geneLOC666162, Dact1, LOC100041190
Upstream geneTrim9, Txndc1, LOC100040965, LOC100041061, Frmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik
Downstream geneDaam1, LOC666213, LOC666220, Gpr135, LOC100041239, 2810055F11Rik, 1200003C05Rik, 4930403N07Rik, Rtn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073O04.bB6Ng01-073O04.g
ACCDH890883DH890884
length1,1441,099
definitionDH890883|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O04, 5' end.DH890884|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,515,556 - 72,516,707)(72,396,359 - 72,397,469)
sequence
gaattcagtctacaaaccacatgtggtataagttaaagaaccacaccctg
aaagctgtcttctgacctccacatgtgtgccccggaacaggccacgagac
tacacacacatgcgcgcacacacacacacacacacacacacagacacgca
cacgcacacgcgtacacacacacacatacacacacacacacatacataca
tacacacacatacacacacacacacatacgtacatacacacacacacata
catacacacacaccaaataaaaagaaaagtgcaattttcagataatgtat
aagccaaatcaaaagtcaattcaacaagctttcactctcttggcagcccc
tcttgggccaacttcaacataagaaaagaaactttatttttcctgtttct
aaagttaaaaaaaaattgaagaaaaaaagctattaaatgctctggaactc
ttgggtattctaaacagaccataaacaaactctaaaccccaaagctaatg
ctacagacatagctaagactgagtcttgggcagcagagatcaaagacaaa
attcacaggtcaatttctattttagcaacgtgataaagatcattactaac
accatgaaatgagtgtctgctctcaagtgagagccctactatgtgccagg
cactggtctcacctatgtaactgccacttattatccacaacaatctcaca
tggtagatgttgttactcacccaattttatcatggtgaaaacctagatgt
ttgttcaaggtcacatagctagggagtaatggggccagtaatggccagtt
gggtctggagcctacccttctaaccatgaaggcattctaattgtttagta
tatttgtgtcctaccacaaataaagtggcatttttatcttcattctacag
ataaagaatgtggctatgccactggccttaccctagcagtttagctggaa
gcttgaatgggggctgctacttgtactggtgacagcttgcttcaagcatt
ttgcaagtctcagcttgctgtggtgggaaaagaacttaataaaaggcaga
tacactgtagcctgactttaagctactttgtgggtttttttcttccactt
tgcccaccttcattcctaacactagtagggggaaaaaagataga
gaattccattttctttatagtttctggcactatctctcccaattaaaact
aaacattggctacagaaaaggtcagtgaattatagtctttcatccaagtc
tgttgttacctgcttttataaataaagttttattggcacacagacatgcc
ttgctttgttcacttatcagcgggctgcttttgagctataagggcagagt
agtgacagtggcagagtatccgcggctacaatatttgctctctaagacat
gtactgagttttttgattcctggcttagaggaaacatttccttgattttt
cctaacttgagagagctgatgcagagctgactgacctggccaacagctag
ttttaaagcttagagatggagttggcaagctgggtgagtgggaggaggct
cttacttaccactgggcccaagatggattccctatgcccaccaagtggga
gaagagacctgaccattaaaagtcagcgtcggacttattgcacacgcaca
ctgtggcacgcatgtacacacacacacacacacacacacacacacacaca
cagagtaagtaaaattaatgaaaagtttgaaatctgtatgaaagtcccaa
agaatacacttaaaaagacattatattgattcatatttttagtctgagag
ataatgtgggactaggagaagtgaccagaggttagacataacttgtacta
gtcttcagggctttcccagattctcaaagctttctagtgtctcctcaata
tctccaaaacttcctgaaatacaatgggcacccactaggcagttgttaat
tggccaacagcttacttttccgtacactctcttttttcagtctcccctca
gatggcaacctctaccgggtcatcaaactatttcctggaatgttttttcc
tggagtactccccacccacccctctaaggactacctgctctcacgtcttc
tggcaggatttctaccactgtggactgccagttctgatctccctagctct
ccctcaaccctgcaaacagccactttatttgcaaggcaacactttctatt
tcttcaattctgacccttgaacgttgactgtcagagctgagctataaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_72515556_72516707
seq2: B6Ng01-073O04.b_47_1190 (reverse)

seq1  TCTATCCTTTTTTTCTCTCCTACTTAGTGTTAGGGAATTGAAGGTGGGGA  50
      ||||||  ||||||| | ||||| ||||||||||  | ||||||| ||| 
seq2  TCTATC--TTTTTTC-CCCCTAC-TAGTGTTAGG--AATGAAGGT-GGGC  43

seq1  AAAGTGGAAGGAAAAAGAACCCACAAAGTAGCTAAAAGTCAGGCTACAGT  100
      ||||||||||  |||| |||||||||||||||| ||||||||||||||||
seq2  AAAGTGGAAG--AAAAAAACCCACAAAGTAGCTTAAAGTCAGGCTACAGT  91

seq1  GTATCTG-CTTTTATTAAGTTCTTTTCCCACCACCAGCAAGCTGAGACTT  149
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  GTATCTGCCTTTTATTAAGTTCTTTTCCCACCA-CAGCAAGCTGAGACTT  140

seq1  GCAAAATGCTTGAAGCAAGCTGTCACCAGTACAAGTAGCAGCCCCCATTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGCTTGAAGCAAGCTGTCACCAGTACAAGTAGCAGCCCCCATTC  190

seq1  AAGCTTCCAGCTAAACTGCTAGGGTAAGGCCAGTGGCATAGCCACATTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCAGCTAAACTGCTAGGGTAAGGCCAGTGGCATAGCCACATTCT  240

seq1  TTATCTGTAGAATGAAGATAAAAATGCCACTTTATTTGTGGTAGGACACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTAGAATGAAGATAAAAATGCCACTTTATTTGTGGTAGGACACA  290

seq1  AATATACTAAACAATTAGAATGCCTTCATGGTTAGAAGGGTAGGCTCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTAAACAATTAGAATGCCTTCATGGTTAGAAGGGTAGGCTCCAG  340

seq1  ACCCAACTGGCCATTACTGGCCCCATTACTCCCTAGCTATGTGACCTTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACTGGCCATTACTGGCCCCATTACTCCCTAGCTATGTGACCTTGA  390

seq1  ACAAACATCTAGGTTTTCACCATGATAAAATTGGGTGAGTAACAACATCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATCTAGGTTTTCACCATGATAAAATTGGGTGAGTAACAACATCT  440

seq1  ACCATGTGAGATTGTTGTGGATAATAAGTGGCAGTTACATAGGTGAGACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGAGATTGTTGTGGATAATAAGTGGCAGTTACATAGGTGAGACC  490

seq1  AGTGCCTGGCACATAGTAGGGCTCTCACTTGAGAGCAGACACTCATTTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGGCACATAGTAGGGCTCTCACTTGAGAGCAGACACTCATTTCA  540

seq1  TGGTGTTAGTAATGATCTTTATCACGTTGCTAAAATAGAAATTGACCTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTAGTAATGATCTTTATCACGTTGCTAAAATAGAAATTGACCTGT  590

seq1  GAATTTTGTCTTTGATCTCTGCTGCCCAAGACTCAGTCTTAGCTATGTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGTCTTTGATCTCTGCTGCCCAAGACTCAGTCTTAGCTATGTCT  640

seq1  GTAGCATTAGCTTTGGGGTTTAGAGTTTGTTTATGGTCTGTTTAGAATAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCATTAGCTTTGGGGTTTAGAGTTTGTTTATGGTCTGTTTAGAATAC  690

seq1  CCAAGAGTTCCAGAGCATTTAATAGCTTTTTTTCTTCAATTTTTTTTTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGTTCCAGAGCATTTAATAGCTTTTTTTCTTCAATTTTTTTTTAA  740

seq1  CTTTAGAAACAGGAAAAATAAAGTTTCTTTTCTTATGTTGAAGTTGGCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAAACAGGAAAAATAAAGTTTCTTTTCTTATGTTGAAGTTGGCCC  790

seq1  AAGAGGGGCTGCCAAGAGAGTGAAAGCTTGTTGAATTGACTTTTGATTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGCTGCCAAGAGAGTGAAAGCTTGTTGAATTGACTTTTGATTTG  840

seq1  GCTTATACATTATCTGAAAATTGCACTTTTCTTTTTATTTGGTGTGTGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATACATTATCTGAAAATTGCACTTTTCTTTTTATTTGGTGTGTGTG  890

seq1  TATGTATGTGTGTGTGTGTATGTACGTATGTGTGTGTGTGTGTATGTGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTGTGTGTGTGTATGTACGTATGTGTGTGTGTGTGTATGTGTG  940

seq1  TGTATGTATGTATGTGTGTGTGTGTGTATGTGTGTGTGTGTACGCGTGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATGTATGTGTGTGTGTGTGTATGTGTGTGTGTGTACGCGTGTG  990

seq1  CGTGTGCGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCATGTGTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGCGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCATGTGTG  1040

seq1  TGTAGTCTCGTGGCCTGTTCCGGGGCACACATGTGGAGGTCAGAAGACAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCTCGTGGCCTGTTCCGGGGCACACATGTGGAGGTCAGAAGACAG  1090

seq1  CTTTCAGGGTGTGGTTCTTT-CCTTATACCACATGTGGTTTGTAGACTGA  1148
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  CTTTCAGGGTGTGGTTCTTTAACTTATACCACATGTGGTTTGTAGACTGA  1140

seq1  ATTC  1152
      ||||
seq2  ATTC  1144

seq1: chr12_72396359_72397469
seq2: B6Ng01-073O04.g_67_1165

seq1  GAATTCCATTTTCTTTATAGTTTCTGGCACTATCTCTCCCAATTAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTTCTTTATAGTTTCTGGCACTATCTCTCCCAATTAAAACT  50

seq1  AAACATTGGCTACAGAAAAGGTCAGTGAATTATAGTCTTTCATCCAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGGCTACAGAAAAGGTCAGTGAATTATAGTCTTTCATCCAAGTC  100

seq1  TGTTGTTACCTGCTTTTATAAATAAAGTTTTATTGGCACACAGACATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTACCTGCTTTTATAAATAAAGTTTTATTGGCACACAGACATGCC  150

seq1  TTGCTTTGTTCACTTATCAGCGGGCTGCTTTTGAGCTATAAGGGCAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGTTCACTTATCAGCGGGCTGCTTTTGAGCTATAAGGGCAGAGT  200

seq1  AGTGACAGTGGCAGAGTATCCGCGGCTACAATATTTGCTCTCTAAGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAGTGGCAGAGTATCCGCGGCTACAATATTTGCTCTCTAAGACAT  250

seq1  GTACTGAGTTTTTTGATTCCTGGCTTAGAGGAAACATTTCCTTGATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGTTTTTTGATTCCTGGCTTAGAGGAAACATTTCCTTGATTTTT  300

seq1  CCTAACTTGAGAGAGCTGATGCAGAGCTGACTGACCTGGCCAACAGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTGAGAGAGCTGATGCAGAGCTGACTGACCTGGCCAACAGCTAG  350

seq1  TTTTAAAGCTTAGAGATGGAGTTGGCAAGCTGGGTGAGTGGGAGGAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGCTTAGAGATGGAGTTGGCAAGCTGGGTGAGTGGGAGGAGGCT  400

seq1  CTTACTTACCACTGGGCCCAAGATGGATTCCCTATGCCCACCAAGTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTACCACTGGGCCCAAGATGGATTCCCTATGCCCACCAAGTGGGA  450

seq1  GAAGAGACCTGACCATTAAAAGTCAGCGTCGGACTTATTGCACACGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGACCTGACCATTAAAAGTCAGCGTCGGACTTATTGCACACGCACA  500

seq1  CTGTGGCACGCATGTACACACACACACACACACACACACACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCACGCATGTACACACACACACACACACACACACACACACACACA  550

seq1  CAGAGTAAGTAAAATTAATGAAAAGTTTGAAATCTGTATGAAAGTCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAAGTAAAATTAATGAAAAGTTTGAAATCTGTATGAAAGTCCCAA  600

seq1  AGAATACACTTAAAAAGACATTATATTGATTCATATTTTTAGTCTGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACACTTAAAAAGACATTATATTGATTCATATTTTTAGTCTGAGAG  650

seq1  ATAATGTGGGACTAGGAGAAGTGACCAGAGGTTAGACATAACTTGTACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGGGACTAGGAGAAGTGACCAGAGGTTAGACATAACTTGTACTA  700

seq1  GTCTTCAGGGCTTTCCCAGATTCTCAAAGCTTTCTAGTGTCTCCTCAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAGGGCTTTCCCAGATTCTCAAAGCTTTCTAGTGTCTCCTCAATA  750

seq1  TCTCCAAAACTTCCTGAAATACAATGGGCACCCACTAGGCAGTTGTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAAACTTCCTGAAATACAATGGGCACCCACTAGGCAGTTGTTAAT  800

seq1  TGGCCAACAGCTTACTTTTCCGTACACTCTCTTTTTTCAGTCTCCCCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAACAGCTTACTTTTCCGTACACTCTCTTTTTTCAGTCTCCCCTCA  850

seq1  GATGGCAACCTCTACCGGGTCATCAAACTATTTCCTGGAATGTTTTTTTC  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATGGCAACCTCTACCGGGTCATCAAACTATTTCCTGGAATG-TTTTTTC  899

seq1  CTGGAGTACTCCCCCACCCCACCCCTCTAAGGACTACCTGCTCTCACGTC  950
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  CTGGAGTACTCCCC--ACCCACCCCTCTAAGGACTACCTGCTCTCACGTC  947

seq1  TTCCTGGCAGGGATTTCTACCACTGTGGACTGCCAGTTCTGATCTCCCTA  1000
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TT-CTGGCA-GGATTTCTACCACTGTGGACTGCCAGTTCTGATCTCCCTA  995

seq1  GCTCCTCCCTCCAACCCTGCAAACAGCCAC-TTATTTGCCAAGGCAACAC  1049
      ||| |||||| ||||||||||||||||||| ||||||| |||||||||||
seq2  GCT-CTCCCT-CAACCCTGCAAACAGCCACTTTATTTG-CAAGGCAACAC  1042

seq1  TTTCTATTTCTTCAAATCCTGACCCCTGACCGTTTGACTGGTCAGGAGGC  1099
      ||||||||||||| ||| ||||||| ||| || |||||| |||||   ||
seq2  TTTCTATTTCTTC-AATTCTGACCCTTGAACG-TTGACT-GTCAG--AGC  1087

seq1  TGAGCTATAAGA  1111
      ||||||||||||
seq2  TGAGCTATAAGA  1099