BAC Information

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BAC

Clone NameB6Ng01-079K19
Chromosome12 (Build37)
Map Location 7,096,522 - 7,211,912
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043137, LOC238049, LOC100042118
Downstream geneLOC668380, EG668388, Apob
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079K19.bB6Ng01-079K19.g
ACCDH895015DH895016
length1,1841,128
definitionDH895015|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K19, 5' end.DH895016|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,210,728 - 7,211,912)(7,096,522 - 7,097,644)
sequence
gaattcacaaatgaagggagggaaggtttgctctgcttcagaaatgtcag
tggtttgcttgaggtaaaaggaagaatatctcagagcgggtagaattttt
ctttgtctcatgtatccaggatgcaaatatagagtatgtcacgctggttt
tcttcattttcctctgccattgtaactgggttcccagtctatggatcata
ctatctccagcacagattcttttagatggcccaacatgcttcgacacagt
aatcctcaattccctctaagccattatggtaaccagaaaaagaggagtgg
tttacagggacacatttaaaatttcagtctgggactcccacctcaaccac
aatttttaatttatagagttaaatctagctgagttcaaattccattgcaa
aagtcaccagagggactatatctctctctcgttcagcagaaaagccaagc
acagcagttcaattatgctagcactgagtcctgctctccaaagactgaaa
ggccagagggaaaggcatcaagaggagacttatatgatcctgttcactcc
ccttggctagaaatagcattgtgttagtgactagaaaattgaaatggaat
gtgatccaagatggcagccagtgccttttgttctattaacctctgggctg
gactgctcagtacagagaagggtgaccaagatgaattacttctttaatct
ttgtgaattgcctttctaatgtaagaaggtgatctgagaaaattttggtt
tatatccaaaatgtctatgatttaaaaaagtcattaggatagaggtttat
agaccagccaagcaaaccaggtatctgaaaaacaaattaataaatacact
ccaggatttcagaataaatgagagatgaaatggtagaagttctgtaataa
ttattggttctcaaattaatggtaataattaccacagcaaattgccatgt
aactgttcagtgacaagtttatatctaatcctacatttgtaactgggttt
ctctctattttcatgtcttacggataagcttcttgcctttagatattctt
gctttaatccctaccttaccttaggcccttgttctgcatatggagaagta
aaatgattgaagaaaagttttattgattgccatccttacattttgccaaa
agatcctggaaatagcagcccactgaccgtgtcc

gaattcaagaccagcctgatttacagagactccatcacaacaaacaaagc
aatgaacatattagttccagtcagtccttagaacttcacatatccatgtg
cttcttcagtaaaatctggctttgttgagacagtgatacatacaagcagg
cttatgttttgtaaatcaatctgaattagctgtgtttccaacatatacat
atacatacacatacacatatacccacacatatataatgagaaaatgctac
tcagcccatatatacatatatatgtatatatatatacacacacacacaca
cacacacacacacacacacacacacacagacacacacacacagacacaca
cacgaaaagaaaagtgttctcatgcttggttgtcagaagatagatcctaa
gctgtctggtttcatactcttccctttgaagaatgacactgttgcaccaa
tctgttttgcctttgagatcagaagaaaccacacaatagagtaagggaca
tccactgcagatggtaatgacaatgtagaagaataatgtccataacctca
tcatatgttcatcaaactctcatttgttccagacccagcttcatagcatc
ccctacatccaggcacttccagaaaaacaattttccaatcaatagagcct
caagtgacatctctagcttactattgaaatttagcaatggtttgacatac
aacagtgaagtgctaacatataagaaaatctgaggagacctgtagccatt
acatataacatgaaacatgaaattcctacagacaccataactgtctttag
gagtaaatgccctccactttgcaatcaatactagctaaactttatacgac
tctttctcatttttcacagtaactatgttctgtagattctcctaacgcac
attgactgagtgactagaaaacaataatccacaaatgatctattgtccta
attagacatattccaggagatttttacattagtagtaaatggtgtcagaa
aacactgactacacactagaaacttatttttacaacagggattaaggatg
gatttggactactctaatttgacattaaggaatactggaacacccaccct
cctgttattgtctgggcccatctctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7210728_7211912
seq2: B6Ng01-079K19.b_48_1231 (reverse)

seq1  GGACA-GGTCAGT-GGCTGCTATTCTCAGGATCCTTTTGTGCAAAATGTA  48
      ||||| ||||||| ||||||||||  |||||| |||||| ||||||||||
seq2  GGACACGGTCAGTGGGCTGCTATTTCCAGGAT-CTTTTG-GCAAAATGTA  48

seq1  GGATTGGCATTCATTAAAACCTTTTCTTCAATCATTTTAC-TCTCATTAT  97
       |  ||||| ||| ||||| |||||||||||||||||||| ||||  |||
seq2  AGGATGGCAATCAATAAAA-CTTTTCTTCAATCATTTTACTTCTCCATAT  97

seq1  GCAGAACAAGGG-CTTAGGTAA-GTAGGGATTAAAGCAAGAATTATTCTA  145
      |||||||||||| || |||||| ||||||||||||||||||||   ||||
seq2  GCAGAACAAGGGCCTAAGGTAAGGTAGGGATTAAAGCAAGAAT--ATCTA  145

seq1  AA-GCAAGAAGCTTTATCCGTAAGACATGAAAATAGAGAGAAA-CCAGTT  193
      || ||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  AAGGCAAGAAGC-TTATCCGTAAGACATGAAAATAGAGAGAAACCCAGTT  194

seq1  ACAAATGTAGGATTAGATTATAAACTTGTTCACTGAACAGTTACATGGCA  243
      ||||||||||||||||| |||||||||| |||||||||||||||||||||
seq2  ACAAATGTAGGATTAGA-TATAAACTTG-TCACTGAACAGTTACATGGCA  242

seq1  ATTTGCTGTGGTAATTATTACCATTAATTTGAGAACCAATAATTATTACA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGTGGTAATTATTACCATTAATTTGAGAACCAATAATTATTACA  292

seq1  GAACTTCTACCATTTCATCTCTCATTTATTCTGAAATCCTGGAGTGTATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCTACCATTTCATCTCTCATTTATTCTGAAATCCTGGAGTGTATT  342

seq1  TATTAATTTGTTTTTCAGATACCTGGTTTGCTTGGCTGGTCTATAAACCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTTGTTTTTCAGATACCTGGTTTGCTTGGCTGGTCTATAAACCT  392

seq1  CTATCCTAATGACTTTTTTAAATCATAGACATTTTGGATATAAACCAAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAATGACTTTTTTAAATCATAGACATTTTGGATATAAACCAAAA  442

seq1  TTTTCTCAGATCACCTTCTTACATTAGAAAGGCAATTCACAAAGATTAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAGATCACCTTCTTACATTAGAAAGGCAATTCACAAAGATTAAA  492

seq1  GAAGTAATTCATCTTGGTCACCCTTCTCTGTACTGAGCAGTCCAGCCCAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATTCATCTTGGTCACCCTTCTCTGTACTGAGCAGTCCAGCCCAG  542

seq1  AGGTTAATAGAACAAAAGGCACTGGCTGCCATCTTGGATCACATTCCATT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAATAGAACAAAAGGCACTGGCTGCCATCTTGGATCACATTCCATT  592

seq1  TCAATTTTCTAGTCACTAACACAATGCTATTTCTAGCCAAGGGGAGTGAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTCTAGTCACTAACACAATGCTATTTCTAGCCAAGGGGAGTGAA  642

seq1  CAGGATCATATAAGTCTCCTCTTGATGCCTTTCCCTCTGGCCTTTCAGTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCATATAAGTCTCCTCTTGATGCCTTTCCCTCTGGCCTTTCAGTC  692

seq1  TTTGGAGAGCAGGACTCAGTGCTAGCATAATTGAACTGCTGTGCTTGGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGAGCAGGACTCAGTGCTAGCATAATTGAACTGCTGTGCTTGGCT  742

seq1  TTTCTGCTGAACGAGAGAGAGATATAGTCCCTCTGGTGACTTTTGCAATG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTGAACGAGAGAGAGATATAGTCCCTCTGGTGACTTTTGCAATG  792

seq1  GAATTTGAACTCAGCTAGATTTAACTCTATAAATTAAAAATTGTGGTTGA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAACTCAGCTAGATTTAACTCTATAAATTAAAAATTGTGGTTGA  842

seq1  GGTGGGAGTCCCAGACTGAAATTTTAAATGTGTCCCTGTAAACCACTCCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAGTCCCAGACTGAAATTTTAAATGTGTCCCTGTAAACCACTCCT  892

seq1  CTTTTTCTGGTTACCATAATGGCTTAGAGGGAATTGAGGATTACTGTGTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTGGTTACCATAATGGCTTAGAGGGAATTGAGGATTACTGTGTC  942

seq1  GAAGCATGTTGGGCCATCTAAAAGAATCTGTGCTGGAGATAGTATGATCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGTTGGGCCATCTAAAAGAATCTGTGCTGGAGATAGTATGATCC  992

seq1  ATAGACTGGGAACCCAGTTACAATGGCAGAGGAAAATGAAGAAAACCAGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTGGGAACCCAGTTACAATGGCAGAGGAAAATGAAGAAAACCAGC  1042

seq1  GTGACATACTCTATATTTGCATCCTGGATACATGAGACAAAGAAAAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATACTCTATATTTGCATCCTGGATACATGAGACAAAGAAAAATTC  1092

seq1  TACCCGCTCTGAGATATTCTTCCTTTTACCTCAAGCAAACCACTGACATT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGCTCTGAGATATTCTTCCTTTTACCTCAAGCAAACCACTGACATT  1142

seq1  TCTGAAGCAGAGCAAACCTTCCCTCCCTTCATTTGTGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCAGAGCAAACCTTCCCTCCCTTCATTTGTGAATTC  1184


seq1: chr12_7096522_7097644
seq2: B6Ng01-079K19.g_69_1196

seq1  GAATTCAAGACCAGCCTGATTTACAGAGACTCCATCACAACAAACAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACCAGCCTGATTTACAGAGACTCCATCACAACAAACAAAGC  50

seq1  AATGAACATATTAGTTCCAGTCAGTCCTTAGAACTTCACATATCCATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACATATTAGTTCCAGTCAGTCCTTAGAACTTCACATATCCATGTG  100

seq1  CTTCTTCAGTAAAATCTGGCTTTGTTGAGACAGTGATACATACAAGCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAGTAAAATCTGGCTTTGTTGAGACAGTGATACATACAAGCAGG  150

seq1  CTTATGTTTTGTAAATCAATCTGAATTAGCTGTGTTTCCAACATATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTTTTGTAAATCAATCTGAATTAGCTGTGTTTCCAACATATACAT  200

seq1  ATACATACACATACACATATACCCACACATATATAATGAGAAAATGCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACACATACACATATACCCACACATATATAATGAGAAAATGCTAC  250

seq1  TCAGCCCATATATACATATATATGTATATATATATACACACACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCATATATACATATATATGTATATATATATACACACACACACACA  300

seq1  CACACACACACACACACACACACACACAGACACACACACACAGACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACAGACACACACACACAGACACACA  350

seq1  CACGAAAAGAAAAGTGTTCTCATGCTTGGTTGTCAGAAGATAGATCCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAAAGAAAAGTGTTCTCATGCTTGGTTGTCAGAAGATAGATCCTAA  400

seq1  GCTGTCTGGTTTCATACTCTTCCCTTTGAAGAATGACACTGTTGCACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTGGTTTCATACTCTTCCCTTTGAAGAATGACACTGTTGCACCAA  450

seq1  TCTGTTTTGCCTTTGAGATCAGAAGAAACCACACAATAGAGTAAGGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTGCCTTTGAGATCAGAAGAAACCACACAATAGAGTAAGGGACA  500

seq1  TCCACTGCAGATGGTAATGACAATGTAGAAGAATAATGTCCATAACCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCAGATGGTAATGACAATGTAGAAGAATAATGTCCATAACCTCA  550

seq1  TCATATGTTCATCAAACTCTCATTTGTTCCAGACCCAGCTTCATAGCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGTTCATCAAACTCTCATTTGTTCCAGACCCAGCTTCATAGCATC  600

seq1  CCCTACATCCAGGCACTTCCAGAAAAACAATTTTCCAATCAATAGAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACATCCAGGCACTTCCAGAAAAACAATTTTCCAATCAATAGAGCCT  650

seq1  CAAGTGACATCTCTAGCTTACTATTGAAATTTAGCAATGGTTTGACATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGACATCTCTAGCTTACTATTGAAATTTAGCAATGGTTTGACATAC  700

seq1  AACAGTGAAGTGCTAACATATAAGAAAATCTGAGGAGACCTGTAGCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGAAGTGCTAACATATAAGAAAATCTGAGGAGACCTGTAGCCATT  750

seq1  ACATATAACATGAAACATGAAATTCCTACAGACACCATAACTGTCTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAACATGAAACATGAAATTCCTACAGACACCATAACTGTCTTTAG  800

seq1  GAGTAAATGCCCTCCACTTTGCAATCAATACTAGCTAAACTTTATACGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAATGCCCTCCACTTTGCAATCAATACTAGCTAAACTTTATACGAC  850

seq1  TCTTTCTCATTTTTCACAGTAACTATGTTCTGTAGATTCTCCTAACGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCATTTTTCACAGTAACTATGTTCTGTAGATTCTCCTAACGCAC  900

seq1  ATTGACTGAGTGACTAGAAAACAATAATCCACAAAATGATCTATTGTCCT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTGACTGAGTGACTAGAAAACAATAATCCAC-AAATGATCTATTGTCCT  949

seq1  AATTAGAACATATTCCAGGAGATTTTTACATTAGTAGTAAATGGTGTCAG  1000
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAG-ACATATTCCAGGAGATTTTTACATTAGTAGTAAATGGTGTCAG  998

seq1  -AAACACTGACTACACCACTAGAAAC-TATTTTACAAACAGGAATCAGGA  1048
       |||||||||||||| |||||||||| ||||||   |||||| || | | 
seq2  AAAACACTGACTACA-CACTAGAAACTTATTTTTACAACAGGGATTAAGG  1047

seq1  ATGGATTT-GACTACTCTAA-TTGACATTAAGGTATACTGG-ACACCCA-  1094
      |||||||| ||||||||||| |||||||||||| ||||||| ||||||| 
seq2  ATGGATTTGGACTACTCTAATTTGACATTAAGGAATACTGGAACACCCAC  1097

seq1  CCTCCTGTTATTGTCTGG--CCATCTCTGTT  1123
      ||||||||||||||||||  |||||||||||
seq2  CCTCCTGTTATTGTCTGGGCCCATCTCTGTT  1128


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