BAC Information

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BAC

Clone NameB6Ng01-081E21
Chromosome12 (Build37)
Map Location 61,432,324 - 61,433,490
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665639, LOC665644, EG622488
Downstream geneLOC665665, Ppia-ps12_475.1, LOC100040300
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081E21.bB6Ng01-081E21.g
ACCDH896198DH896199
length1,1631,189
definitionDH896198|Mus musculus domesticus DNA, BAC clone: B6Ng01-081E21, 5' end.DH896199|Mus musculus domesticus DNA, BAC clone: B6Ng01-081E21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtcctcatgatttcctgagtgaactaactccctcatacccaa
aaagtaacttaaccaaatctctatagcttaattttcaagtataaactaga
aatttaatgatttattcattacaaatattatgtcttatgcaatccttgga
aggcttcaggaccaccaggataaacataaactggaattcaaggatatttt
ttaccctggcatagataggctcttaatttttactccaaactctatacaac
cttattttgcaactaggagacaaattatttcttgacactaatttgcatcc
atttgtctgctggtaaacacaattagtgcccaatgttcaatctttttcag
gccacatagtcatacatattaaggaataacctaaggtttcaaatggaaaa
ctacatttatatgtttatctttctctttagttttgacctgtctgacgtaa
accaaaaaatttctgagtgagatctgcaagatgttccagcagaactgtat
acacatattcattggccagcactaactcatactatcatgcagaatggtag
tttcacaagtcctttgcatactcatttaaatttcagcattgactgttcca
cacagtgcaacattgtgttgtgtgactctacttgctccagcatcattagc
atcaagctccatgaggaccattggtgtctactaagtcttggcagctgagt
ctccaatccagtcaaagtctcatggagataactttaaggccatgcaatca
catgtgacctataacctcactagagctgcaaatacagaagtccctacaaa
gtctatcagcctagagagggttgatgatcctcactggtagctgcagatgc
accatcatagtgagtatttctccatgtataaatactttctcaactctttt
ctagctccttatcaaatctgtattgttgttatttcctgcacaaccaccat
agtcaagtgctagttctctattgacacctggaaaacttaccgatgggttc
tgtggacctttacctattaccctgagtgttagtaacaatagtcataactg
actttgttccttagtccttaaagtttttatgctattttacctcaggccct
caagtcttttttatggaagcctatgtaatataactgtccatacctatgag
tgttcacttcttt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtattcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
ggagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacggagtttggagctgagatg
aaaggatggaccatgtagagactgccatagccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacgcagatgtagctgtctctgtgagactaatgcccggggcccagcaa
acacagaagtgatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctgaagaagttagccaaggagctaaagggatctgcaaccc
tataggttggaacaacattatgagctaccataaccccggagctctgaatc
tagctgcatatatataacaaagatggccatctggcccatactgggtaaaa
aaggtcatttgactgtctaacctttataggcccagacacggaatacacgg
cccataatagtcggagtgggtggtgtaagtgcgacgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_61432324_61433490
seq2: B6Ng01-081E21.b_45_1207

seq1  GAATTCAGGTCCTCATGATTTCCTGAGTGAACTAACTCCCTCATACCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCTCATGATTTCCTGAGTGAACTAACTCCCTCATACCCAA  50

seq1  AAAGTAACTTAACCAAATCTCTATAGCTTAATTTTCAAGTATAAACTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACTTAACCAAATCTCTATAGCTTAATTTTCAAGTATAAACTAGA  100

seq1  AATTTAATGATTTATTCATTACAAATATTATGTCTTATGCAATCCTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATGATTTATTCATTACAAATATTATGTCTTATGCAATCCTTGGA  150

seq1  AGGCTTCAGGACCACCAGGATAAACATAAACTGGAATTCAAGGATATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAGGACCACCAGGATAAACATAAACTGGAATTCAAGGATATTTT  200

seq1  TTACCCTGGCATAGATAGGCTCTTAATTTTTACTCCAAACTCTATACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTGGCATAGATAGGCTCTTAATTTTTACTCCAAACTCTATACAAC  250

seq1  CTTATTTTGCAACTAGGAGACAAATTATTTCTTGACACTAATTTGCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTGCAACTAGGAGACAAATTATTTCTTGACACTAATTTGCATCC  300

seq1  ATTTGTCTGCTGGTAAACACAATTAGTGCCCAATGTTCAATCTTTTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTGCTGGTAAACACAATTAGTGCCCAATGTTCAATCTTTTTCAG  350

seq1  GCCACATAGTCATACATATTAAGGAATAACCTAAGGTTTCAAATGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATAGTCATACATATTAAGGAATAACCTAAGGTTTCAAATGGAAAA  400

seq1  CTACATTTATATGTTTATCTTTCTCTTTAGTTTTGACCTGTCTGACGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTATATGTTTATCTTTCTCTTTAGTTTTGACCTGTCTGACGTAA  450

seq1  ACCAAAAAATTTCTGAGTGAGATCTGCAAGATGTTCCAGCAGAACTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAATTTCTGAGTGAGATCTGCAAGATGTTCCAGCAGAACTGTAT  500

seq1  ACACATATTCATTGGCCAGCACTAACTCATACTATCATGCAGAATGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATTCATTGGCCAGCACTAACTCATACTATCATGCAGAATGGTAG  550

seq1  TTTCACAAGTCCTTTGCATACTCATTTAAATTTCAGCATTGACTGTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAAGTCCTTTGCATACTCATTTAAATTTCAGCATTGACTGTTCCA  600

seq1  CACAGTGCAACATTGTGTTGTGTGACTCTACTTGCTCCAGCATCATTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGCAACATTGTGTTGTGTGACTCTACTTGCTCCAGCATCATTAGC  650

seq1  ATCAAGCTCCATGAGGACCATTGGTGTCTACTAAGTCTTGGCAGCTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCTCCATGAGGACCATTGGTGTCTACTAAGTCTTGGCAGCTGAGT  700

seq1  CTCCAATCCAGTCAAAGTCTCATGGAGATAACTTTAAGGCCATGCAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATCCAGTCAAAGTCTCATGGAGATAACTTTAAGGCCATGCAATCA  750

seq1  CATGTGACCTATAACCTCACTAGAGCTGCAAATACAGAAGTCCCTACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGACCTATAACCTCACTAGAGCTGCAAATACAGAAGTCCCTACAAA  800

seq1  GTCTATCAGCCTAGAGAGGGTTGATGATCCTCACTGGTAGCTGCAGATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCAGCCTAGAGAGGGTTGATGATCCTCACTGGTAGCTGCAGATGC  850

seq1  ACCATCATAGTGAGTATTTCTCCATGTATAAATACTTTCTCAACTCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCATAGTGAGTATTTCTCCATGTATAAATACTTTCTCAACTCTTTT  900

seq1  CTAGCTCCTTATCAAATCTGTATTGTTGTTATTTCCTGCACAACCACCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCTTATCAAATCTGTATTGTTGTTATTTCCTGCACAACCACCAT  950

seq1  AGTCAAGTGCTAGTTCTCTATTGACACCTGGAAAACTTACCGATGGG-TC  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTCAAGTGCTAGTTCTCTATTGACACCTGGAAAACTTACCGATGGGTTC  1000

seq1  TGTGGACCTTTACCTATTACCCTGAGTGTTAGTATACAATAGTCATAAAC  1049
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  TGTGGACCTTTACCTATTACCCTGAGTGTTAGTA-ACAATAGTCAT-AAC  1048

seq1  TGACTTTGTTCCTTAGTCCTTAAAAGTTTTTATGCTA-TTTACTCAAGGC  1098
      ||||||||||||||||||||| ||||||||||||||| |||||   ||||
seq2  TGACTTTGTTCCTTAGTCCTT-AAAGTTTTTATGCTATTTTACCTCAGGC  1097

seq1  CTTCAAGTCTTTTAT-GGGAAGCCTAATGTAATATAAACTGT-CATACCT  1146
      | ||||||||||| |  |||||||| ||||||||| |||||| |||||| 
seq2  CCTCAAGTCTTTTTTATGGAAGCCT-ATGTAATAT-AACTGTCCATACC-  1144

seq1  TATGAGTTGTTTCACTTCTTT  1167
      |||||||   |||||||||||
seq2  TATGAGT--GTTCACTTCTTT  1163