BAC Information

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BAC

Clone NameB6Ng01-082H16
Chromosome12 (Build37)
Map Location 96,759,904 - 96,760,360
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC217786, LOC100039603
Downstream geneLOC667688, Flrt2, 1700019M22Rik, LOC100039664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082H16.b
ACCDH897021
length1,020
definitionDH897021|Mus musculus domesticus DNA, BAC clone: B6Ng01-082H16, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaatttatttatttcttccctggtgtagttataattgagtag
agagttgtttactggcgggggggatgggggttttctgttgtttttggtgg
gttgaaaacatgatttaaaaccatggtgatctgacctcatgcttggaatt
atttcaaccttcttgagtgatttgaggcttgatttgtgactgcttatatg
gtccgttttggagaaggtaccgtgaagtgctgaaaagaaggtgtattctt
tgatttaaggagaaatgttctatacatatctgttaaataatttggttcat
aaccactatttgttttactatgtctttctggggggctttttcctgatctg
tatgctttgaaaatgaagtgttgatgtctcccattgttatggtgttgtgt
tcaatccgggttttgatctttactcttttttcatgtatcagtgtggacat
ccttcccttaaaaagcataattgacttctctctttctttctttcttcctt
tctttcattcttaccatctttccttctctgcttctttctttctatctttc
tttcttacgatccttccttccttccttcattacaataaaattgagactag
ctccatgtgtcctttcactctgtctctcaagaacactgactgaagcactt
aaccagaaaaaaagaattaagaccaaattacccacaatataaataatagg
aatccagaaatacaaaaaaaaaaaagaagcggagttaagggctcagcttc
tgactctcctggcagtgaatatctaaatgcagaaaagattatcatcacat
aggcattcaaggaagactcctttagctattgaaacagattttaacaaaaa
cgtaaaaggaactccaaattgagaagtgaaaacgtaacatatgtgtacac
tgtacttcaaaattcttgggattgtgggacaaaaaaaatagatagccggt
ctctggagtctagaatactggatgactgctacctctagctttgtataaaa
tgtcttcactggcaaattca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_96759904_96760360
seq2: B6Ng01-082H16.b_624_1060 (reverse)

seq1  TGAATTTTGCCAGTGAAGGACATTTTTTATTACAAAAGCTAGAAGGTAGA  50
      |||| |||||||||||| |||||||| ||     |||||||| |||||| 
seq2  TGAA-TTTGCCAGTGAA-GACATTTTATA----CAAAGCTAG-AGGTAG-  42

seq1  CAGTCATTCAGTAATTTCTAGAACTCCAGAGAACCGACTATTCTATTTTT  100
      ||||||| |||||  |||||| ||||||||| |||| ||| |||||||||
seq2  CAGTCATCCAGTA--TTCTAG-ACTCCAGAG-ACCGGCTA-TCTATTTTT  87

seq1  TTTGTCCCACACTCCCAAGAATTTTTGAAGTACAGTGTACACATATGTTT  150
      ||||||||||| ||||||||| ||||||||||||||||||||||||| ||
seq2  TTTGTCCCACAATCCCAAGAA-TTTTGAAGTACAGTGTACACATATG-TT  135

seq1  ACGTTTTTCACTTCTCAATTTGGAGTTCCTTTTACGTTTTTGTTAAAATC  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACG-TTTTCACTTCTCAATTTGGAGTTCCTTTTACGTTTTTGTTAAAATC  184

seq1  TGTTTCATTAGCT-AAGGAGTCTTCCTTGAATGCCTATGTGATGATTAAT  249
      ||||||| ||||| ||||||||||||||||||||||||||||||| ||||
seq2  TGTTTCAATAGCTAAAGGAGTCTTCCTTGAATGCCTATGTGATGA-TAAT  233

seq1  CTTTTCTGCATTTAGATATTCACTGCCAGGAGAGTCAGAAGCTGAGCCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGCATTTAGATATTCACTGCCAGGAGAGTCAGAAGCTGAGCCCT  283

seq1  TAACTCCGCTTCTTTTTTTTTTTTTTTTTTTTTTCTGGATTCCTATTATT  349
      ||||||||||||    |||||||||||| | |||||||||||||||||||
seq2  TAACTCCGCTTC----TTTTTTTTTTTTGTATTTCTGGATTCCTATTATT  329

seq1  TATATTGTGGGTAATTTGGTCTTAATTCTTTTTTTCTGGTTAAGTGCTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGTGGGTAATTTGGTCTTAATTCTTTTTTTCTGGTTAAGTGCTTC  379

seq1  AGTCAGTGTTCTTGAGAGACAGAGTGAAAGGACACATGGAGCTAGTCTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGTTCTTGAGAGACAGAGTGAAAGGACACATGGAGCTAGTCTCA  429

seq1  ATTTTATT  457
      ||||||||
seq2  ATTTTATT  437