BAC Information

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BAC

Clone NameB6Ng01-086J19
Chromosome12 (Build37)
Map Location 77,961,676 - 77,961,876
singlet/doubletsinglet
Overlap geneFntb
Upstream geneSyne2, Esr2, LOC665957, Tex21, Mthfd1, Akap5, Zbtb25, Zbtb1, Hspa2, Gm70, LOC100041694, Plekhg3, Spnb1, Churc1, Gpx2, Rab15
Downstream geneMax, LOC100041765, LOC100041772, Fut8, LOC230765, LOC666659
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086J19.bB6Ng01-086J19.g
ACCDH899961DH899962
length1,182197
definitionDH899961|Mus musculus domesticus DNA, BAC clone: B6Ng01-086J19, 5' end.DH899962|Mus musculus domesticus DNA, BAC clone: B6Ng01-086J19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagggcagccaaggctacagagaaaccctgtctgaaaaaaaact
ttttcaacccagacttgccttaaaattccccaacctccaacctcattctc
catgtgattggcctcctgagcaaaccaatagatactttttagcttattgg
atactttccatacgttaaaaaaaaaaaaaaaaaaaaaaaaaaagacaggg
cctcactatgtagccctgactggcctagaactcactgtgtagaccaggca
ggccttacacctacctctgccttccgagtgctaggattaaagacatgtgc
caccatgccacgacgtagggtttccattgctgtgaagagacatggtcaat
gcaactcttataaggaaagcatttagttggggttggcttacagtttcaga
ggtttagtccattatcatggcaggaagcatggcctgagacacggtgctgg
agtaggaactgagagttgtacgtcttgatcggatggcagccaggaatcac
tcttccgctctgggcggagcctaagcagagggaacctcagagcccacccc
cacaatgatgtacttcctctaagaaggccacacctcctaatagtgctact
acctatgggccaaactttcaaattcaggagtctttggaggccaaacctat
tcaaagccactgctatcccatgcttttatacaaaaagtgtccaaatgtat
ttaaagaaaaagtccacaatccccaagatgaaacctcttcccactcagag
tactgagaaaaagaaaacgttgagaatcacttctagtagtagctcctatg
ggcccagactacatccattccagcagactctagggtggctactagtagcc
cctaaaattaactttggtgtctcataaaaaagggagaaagccaaagcatg
gtcattgcacagtagtctttttttttttttttttttttggttttcgaaac
aggtttctttgtgtagcctggctgtcctggactcactttgtagacaaggc
tgggcctcgaactcagaaatcgcctgcctcttgccttctcttgcttggaa
taaaggcggtgtgccaccatgccacgcagtagttctattgcttgtattat
ggcaagtagaacagcgaacaagtgaatctgacattcacaactgattgctc
aggtcgaatgacattcggttctataggattcc
aactcggggggggggggggatttgctcctcatgcactccatggctgaatg
gtagcaggtttcttgcaaacttttttttttaaagatttatttattatatg
taagtacactgaagctgtcttcccacacaccagaagaggatataagatct
cttgacggatggttgtgagcccccatgtggttgctgggatttgaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_77961676_77961876
seq2: B6Ng01-086J19.g_81_269

seq1  GGGGGGGGGGGA--AGAAGAAAGAGAAAGCCATGCTTTTTGA--GTTAG-  45
      ||||||||||||   |        | |  |||||     |||  | ||| 
seq2  GGGGGGGGGGGATTTGCTCCTCATGCACTCCATG---GCTGAATGGTAGC  47

seq1  -GTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAAGATTTATTTAT  94
       | ||||||      ||||||||||           ||||    ||||||
seq2  AGGTTTCTTGCAAACTTTTTTTTTT-----------AAAG----ATTTAT  82

seq1  TTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGG  144
      ||||||||||||||||||||| ||||||||||  ||||||||||||||| 
seq2  TTATTATATGTAAGTACACTGAAGCTGTCTTCCCACACACCAGAAGAGGA  132

seq1  AGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT  194
        | ||||||| | ||||||||||||||||| ||||||||||||||||||
seq2  TATAAGATCTCTTGACGGATGGTTGTGAGCCCCCATGTGGTTGCTGGGAT  182

seq1  TTGAACT  201
      |||||||
seq2  TTGAACT  189