BAC Information

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BAC

Clone NameB6Ng01-087L10
Chromosome12 (Build37)
Map Location 118,520,113 - 118,618,095
singlet/doubletdoublet
Overlap geneLOC432713
Upstream geneD12Ertd551e, D430020J02Rik, Ncapg2, Rnu7-ps1, Ptprn2, LOC627375
Downstream geneLOC100042461, Rapgef5, A930023M06Rik, Cdca7l, Dnahc11, Sp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087L10.bB6Ng01-087L10.g
ACCDH900762DH900763
length1,1301,020
definitionDH900762|Mus musculus domesticus DNA, BAC clone: B6Ng01-087L10, 5' end.DH900763|Mus musculus domesticus DNA, BAC clone: B6Ng01-087L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,520,113 - 118,521,246)(118,617,080 - 118,618,095)
sequence
gaattccatatgcaagtgttttactgagcatttttgtgtgtatgctcagg
gaaattggtctcttgagttttgtgtatttgtttggtggggatccttatcc
cattttgctaccagggtgatgctggtttctttgaggggatttgttagcat
tctttctctttttatttttatggagcaacttgagcaccatgcattagttc
tttgaaggtttagtatgcgagttcagtaaaacctgtcttctgaggctctc
tctgaggaggctgctgttcgttattgcttcaaccatgttgcttgttatgg
atccattaagttgtttctattctctagatttcattttggcgacttaccta
tgtctttgtctatgaatttatctgttctagggattccagtcttttagaat
ataattttcaaaatatctcttaatagttaaggggttctctcctgaggccc
aaggcacaactataaatattttatctagacagcacaaagggatccaggca
ctgtgctaggtggcttcatttttgtctttcagatttaatgtttttttatt
tctttcttttgagattttaacacaccatcccctcctccctgttctttcca
ccaaccaaagcctcccatagatctctccttgctctctttaaaagtcttaa
aaactggctggtgttcccctccccctctgcatattctcattctcctggct
tctcttgtttagcatttaaacacgtgcagaaaccacccgggtactcccca
gggggattgagagtaatattataggtaatctgtgttttgtgctttattaa
tcaagtagaacactaataaaaaaaacttcataatttagtggaatagaaac
taattcaaagatatctattggaaatagaaaattagagttgattacacctt
ttgcttctgaacaatgacggccttttcattttacctttgatgtttggggg
tcggtcttagcttgtttatgatgctcaatttattaaacaaaccagatggt
ttgtgtcatttgtttagtgaatcgtttataaaaatgttacagagattcac
tgacatgtggcatttcccacattctgccttctgcttctcttctgtaatga
tcttaagggacatgtagtctgtcaagctgg
gaattcaggcccatcacagtgcgctctctaaaccctccgggttccatgtg
ccctggatgacttggattggtgggaacagcacagggcttaaattagataa
cctaaactttattttcagatagttcaaagggaaccccaaattgaataagt
agagacctcccaagttggctcaccagaattctctaattgtctcatgagaa
cccaaacatgggtgcggaaacagactttgggctcatagttttcaaaacac
ttttttttttctttccatttcatcacaagctgcaaaaggccatccatgtt
ggtacagagagaaagaaaaaacggtccccaaacaaaactagatttccaaa
ccgcaggaacaacttccacttcccccttctgttcagggttcgtgaatcag
gaaacgctgtaggtgtgttgtcccttcatagttgaaaaatactgttacct
aagccccagaagggctagttctgggtccagtcattcaggtacattaagag
atgtcaatgttaaatatataaaacagagaaatggcgttctttacagtttg
ggtcagaagtctggactcagcctgctactagtgtttactgaagggacagc
aggaagccagatttcgcaccctcctggctcagttgtttttttgctggctt
caggaactggagcctagggaacggtgagacactgtttctactccacgtgt
tttgtctcttgtttggagctagaactaaaaaagaaactttttaatacctc
ttcattgtgaggggaagccgctgctctacttcagcctgtgctggccacag
catgagagacacccaaggggtgcttcaaccagcaagcctgggacaaactg
ctttgtgcagttccacccgcagcccagttaagcatcagctgacttcacac
gcttatcgggtcaccacggcacgcattcagtccaagtgtgccctgtcaag
caactgccttccctgagcgatctgcatctctaggctctccctagcctgct
gtcttttctggagaagggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_118520113_118521246
seq2: B6Ng01-087L10.b_46_1175

seq1  GAATTCCATATGCAAGTGTTTTACTGAGCATTTTTGTGTGTATGCTCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGCAAGTGTTTTACTGAGCATTTTTGTGTGTATGCTCAGG  50

seq1  GAAATTGGTCTCTTGAGTTTTGTGTATTTGTTTGGTGGGGATCCTTATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGGTCTCTTGAGTTTTGTGTATTTGTTTGGTGGGGATCCTTATCC  100

seq1  CATTTTGCTACCAGGGTGATGCTGGTTTCTTTGAGGGGATTTGTTAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGCTACCAGGGTGATGCTGGTTTCTTTGAGGGGATTTGTTAGCAT  150

seq1  TCTTTCTCTTTTTATTTTTATGGAGCAACTTGAGCACCATGCATTAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCTTTTTATTTTTATGGAGCAACTTGAGCACCATGCATTAGTTC  200

seq1  TTTGAAGGTTTAGTATGCGAGTTCAGTAAAACCTGTCTTCTGAGGCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGTTTAGTATGCGAGTTCAGTAAAACCTGTCTTCTGAGGCTCTC  250

seq1  TCTGAGGAGGCTGCTGTTCGTTATTGCTTCAACCATGTTGCTTGTTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGAGGCTGCTGTTCGTTATTGCTTCAACCATGTTGCTTGTTATGG  300

seq1  ATCCATTAAGTTGTTTCTATTCTCTAGATTTCATTTTGGCGACTTACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTAAGTTGTTTCTATTCTCTAGATTTCATTTTGGCGACTTACCTA  350

seq1  TGTCTTTGTCTATGAATTTATCTGTTCTAGGGATTCCAGTCTTTTAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGTCTATGAATTTATCTGTTCTAGGGATTCCAGTCTTTTAGAAT  400

seq1  ATAATTTTCAAAATATCTCTTAATAGTTAAGGGGTTCTCTCCTGAGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTCAAAATATCTCTTAATAGTTAAGGGGTTCTCTCCTGAGGCCC  450

seq1  AAGGCACAACTATAAATATTTTATCTAGACAGCACAAAGGGATCCAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACAACTATAAATATTTTATCTAGACAGCACAAAGGGATCCAGGCA  500

seq1  CTGTGCTAGGTGGCTTCATTTTTGTCTTTCAGATTTAATGTTTTTTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTAGGTGGCTTCATTTTTGTCTTTCAGATTTAATGTTTTTTTATT  550

seq1  TCTTTCTTTTGAGATTTTAACACACCATCCCCTCCTCCCTGTTCTTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTGAGATTTTAACACACCATCCCCTCCTCCCTGTTCTTTCCA  600

seq1  CCAACCAAAGCCTCCCATAGATCTCTCCTTGCTCTCTTTAAAAGTCTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAAGCCTCCCATAGATCTCTCCTTGCTCTCTTTAAAAGTCTTAA  650

seq1  AAACTGGCTGGTGTTCCCCTCCCCCTCTGCATATTCTCATTCTCCTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCTGGTGTTCCCCTCCCCCTCTGCATATTCTCATTCTCCTGGCT  700

seq1  TCTCTTGTTTAGCATTTAAACACGTGCAGAAACCACCCGGGTACTCCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTTTAGCATTTAAACACGTGCAGAAACCACCCGGGTACTCCCCA  750

seq1  GGGGGATTGAGAGTAATATTATAGGTAATCTGTGTTTTGTGCTTTATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGATTGAGAGTAATATTATAGGTAATCTGTGTTTTGTGCTTTATTAA  800

seq1  TCAAGTAGAACACTAATAAAAAAAACTTCATAA-TTAGTGGAATAGAAAC  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCAAGTAGAACACTAATAAAAAAAACTTCATAATTTAGTGGAATAGAAAC  850

seq1  TAATTCAAAGATATCTATTGG-AATAGAAAATTAGAGTTTGATTACACC-  897
      ||||||||||||||||||||| ||||||||||||||| ||||||||||| 
seq2  TAATTCAAAGATATCTATTGGAAATAGAAAATTAGAG-TTGATTACACCT  899

seq1  TTTGCTTCTGAACAATGACGGCC-TTTCA-TTTACC-TTGATGTTTGGGG  944
      ||||||||||||||||||||||| ||||| |||||| |||||||||||||
seq2  TTTGCTTCTGAACAATGACGGCCTTTTCATTTTACCTTTGATGTTTGGGG  949

seq1  GTCGGTCTTAGC-TGTTTATGATGCTCAATTTATTAAACAAACCAGATGG  993
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTCGGTCTTAGCTTGTTTATGATGCTCAATTTATTAAACAAACCAGATGG  999

seq1  TTTGTGTCATTTGTTTTTAGTTGAATACAGTTAATAAAAATGTTACAGAG  1043
      |||||||||||||  ||||| |||||   ||| |||||||||||||||||
seq2  TTTGTGTCATTTG--TTTAG-TGAAT--CGTTTATAAAAATGTTACAGAG  1044

seq1  ATTTCACTGGACATGTGGCAATTTCCCCACATTCTGGCCTCTGC-TCTCT  1092
      | |||||| |||||||||||  || ||||||||||| | ||||| |||||
seq2  A-TTCACT-GACATGTGGCA--TTTCCCACATTCTGCCTTCTGCTTCTCT  1090

seq1  TCCTGAAATGATCTT-AGGGACATGTAGTCCTGTCATAGCTGG  1134
      | ||| ||||||||| ||||||||||||| |||||| ||||||
seq2  T-CTGTAATGATCTTAAGGGACATGTAGT-CTGTCA-AGCTGG  1130

seq1: chr12_118617080_118618095
seq2: B6Ng01-087L10.g_70_1089 (reverse)

seq1  TACCCCTCTCCAGAAAAGAACAGCAGGCTAGGGAGAGCCTAGAGATGCAG  50
      ||||| |||||||||||| |||||||||||||||||||||||||||||||
seq2  TACCCTTCTCCAGAAAAG-ACAGCAGGCTAGGGAGAGCCTAGAGATGCAG  49

seq1  ATCGCTCAGGGAAGGCAGTTGCTTGGCAGGGCACACTTGGACTGAATGCG  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATCGCTCAGGGAAGGCAGTTGCTTGACAGGGCACACTTGGACTGAATGCG  99

seq1  TGCCGTGGTGACCCGATAAGCGTGTGAAGTCAGCTGATGCTTAACTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGTGGTGACCCGATAAGCGTGTGAAGTCAGCTGATGCTTAACTGGGC  149

seq1  TGCGGGTGGAACTGCAC-AAGCAGTTTGT-CCAGGCTTGCTGGTTG-AGC  197
      ||||||||||||||||| ||||||||||| |||||||||||||||| |||
seq2  TGCGGGTGGAACTGCACAAAGCAGTTTGTCCCAGGCTTGCTGGTTGAAGC  199

seq1  ACCCC-TGGGTGTCTCTCATGCTGTGGCCAGCACAGGCTGAAGTAGAGCA  246
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTGGGTGTCTCTCATGCTGTGGCCAGCACAGGCTGAAGTAGAGCA  249

seq1  GCGGCTTCCCCTCACAATGAAGAGGTATTAAAAAGTTTCTTTTTTAGTTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTTCCCCTCACAATGAAGAGGTATTAAAAAGTTTCTTTTTTAGTTC  299

seq1  TAGCTCC-AACAAGAGACAAAACACGTGGAGTAGAAACAGTGTCTCACCG  345
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCAAACAAGAGACAAAACACGTGGAGTAGAAACAGTGTCTCACCG  349

seq1  TTCCCTAGGCTCCAGTTCCTGAAGCCAGCAAAAAAACAACTGAGCCAGGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAGGCTCCAGTTCCTGAAGCCAGCAAAAAAACAACTGAGCCAGGA  399

seq1  GGGTGCGAAATCTGGCTTCCTGCTGTCCCTTCAGTAAACACTAGTAGCAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCGAAATCTGGCTTCCTGCTGTCCCTTCAGTAAACACTAGTAGCAG  449

seq1  GCTGAGTCCAGACTTCTGACCCAAACTGTAAAGAACGCCATTTCTCTGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTCCAGACTTCTGACCCAAACTGTAAAGAACGCCATTTCTCTGTT  499

seq1  TTATATATTTAACATTGACATCTCTTAATGTACCTGAATGACTGGACCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATTTAACATTGACATCTCTTAATGTACCTGAATGACTGGACCCA  549

seq1  GAACTAGCCCTTCTGGGGCTTAGGTAACAGTATTTTTCAACTATGAAGGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGCCCTTCTGGGGCTTAGGTAACAGTATTTTTCAACTATGAAGGG  599

seq1  ACAACACACCTACAGCGTTTCCTGATTCACGAACCCTGAACAGAAGGGGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACACCTACAGCGTTTCCTGATTCACGAACCCTGAACAGAAGGGGG  649

seq1  AAGTGGAAGTTGTTCCTGCGGTTTGGAAATCTAGTTTTGTTTGGGGACCG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAGTTGTTCCTGCGGTTTGGAAATCTAGTTTTGTTTGGGGACCG  699

seq1  TTTTTTCTTTCTCTCTGTACCAACATGGATGGCCTTTTGCAGCTTGTGAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTCTCTCTGTACCAACATGGATGGCCTTTTGCAGCTTGTGAT  749

seq1  GAAATGGAAAGAAAAAAAAAAGTGTTTTGAAAACTATGAGCCCAAAGTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAAAGAAAAAAAAAAGTGTTTTGAAAACTATGAGCCCAAAGTCT  799

seq1  GTTTCCGCACCCATGTTTGGGTTCTCATGAGACAATTAGAGAATTCTGGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCGCACCCATGTTTGGGTTCTCATGAGACAATTAGAGAATTCTGGT  849

seq1  GAGCCAACTTGGGAGGTCTCTACTTATTCAATTTGGGGTTCCCTTTGAAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAACTTGGGAGGTCTCTACTTATTCAATTTGGGGTTCCCTTTGAAC  899

seq1  TATCTGAAAATAAAGTTTAGGTTATCTAATTTAAGCCCTGTGCTGTTCCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAAAATAAAGTTTAGGTTATCTAATTTAAGCCCTGTGCTGTTCCC  949

seq1  ACCAATCCAAGTCATCCAGGGCACATGGAACCCGGAGGGTTTAGAGAGCG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCCAAGTCATCCAGGGCACATGGAACCCGGAGGGTTTAGAGAGCG  999

seq1  CACTGTGATGGGCCTGAATTC  1016
      |||||||||||||||||||||
seq2  CACTGTGATGGGCCTGAATTC  1020