BAC Information

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BAC

Clone NameB6Ng01-090D01
Chromosome12 (Build37)
Map Location 11,818,933 - 11,819,643
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042308, EG668435, Kcns3, LOC628276, Msgn1, 5830483C08Rik, Smc6, Vsnl1, EG209550, LOC217390, LOC628327
Downstream geneLOC627110, LOC100043209, D12Ertd553e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090D01.bB6Ng01-090D01.g
ACCDH902558DH902559
length1,156711
definitionDH902558|Mus musculus domesticus DNA, BAC clone: B6Ng01-090D01, 5' end.DH902559|Mus musculus domesticus DNA, BAC clone: B6Ng01-090D01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccctaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagattggagctgagatga
aagaatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccaa
tggagagctagagaagtagccaaggagctaaaggatctgcaccctatagt
gaacaacatatgagctacagtacccggagctctgactctagctgcatatt
atcaaagatgctagtcggcatcactgaagagagtcatgactgcactttaa
tggccagtactggacctcagtaaaatgggatgtggggtgggctaggaatt
ggggtg
gaattcatactgatcactaatatatccctcttgataactgtatgaacaca
tagcccatgtgtgtctgtcccccatttatctggcatcacttagcgcttcg
tcttttccaagtaccattaggatgtacatttctttctgtatttctcttgg
ttggtttggtttcaggataactcatagaatttttctttccttctcattcc
tgctctggcagagtttaaggatcattcttcattctcccctgcatggcagg
ttcaaccagtaaacttgtctgggccttataacgtatctgctggaaagcag
cttgagtttcctaatcattagtaaattattcatataatcttttacatctg
tggaagctggaccaatcatatttttctagaaacttgactatttcatccaa
aatttcaaatgttctgccctagtgttactctctttagcaaccctactaac
aaagggcccccaatggaggagctagagaaagtacccaaggagatgaaggg
gtgtgtgaccctataggtggaacaacaatatgaactaatcagtaccccca
aagctcgtgtctctagctgcatacgtagcagaaaatggcctagttggcca
tcaataggaagagaggccccttggtcttgcaaactttatatgccccagta
caggggaacgccagagccaagaagtgggagtgagtaggtagggaatcagg
gtgggggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_11818933_11819643
seq2: B6Ng01-090D01.g_69_779

seq1  GAATTCATACTGATCACTAATATATCCCTCTTGATAACTGTATGAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACTGATCACTAATATATCCCTCTTGATAACTGTATGAACACA  50

seq1  TAGCCCATGTGTGTCTGTCCCCCATTTATCTGGCATCACTTAGCGCTTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCATGTGTGTCTGTCCCCCATTTATCTGGCATCACTTAGCGCTTCG  100

seq1  TCTTTTCCAAGTACCATTAGGATGTACATTTCTTTCTGTATTTCTCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCAAGTACCATTAGGATGTACATTTCTTTCTGTATTTCTCTTGG  150

seq1  TTGGTTTGGTTTCAGGATAACTCATAGAATTTTTCTTTCCTTCTCATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGGTTTCAGGATAACTCATAGAATTTTTCTTTCCTTCTCATTCC  200

seq1  TGCTCTGGCAGAGTTTAAGGATCATTCTTCATTCTCCCCTGCATGGCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGGCAGAGTTTAAGGATCATTCTTCATTCTCCCCTGCATGGCAGG  250

seq1  TTCAACCAGTAAACTTGTCTGGGCCTTATAACGTATCTGCTGGAAAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCAGTAAACTTGTCTGGGCCTTATAACGTATCTGCTGGAAAGCAG  300

seq1  CTTGAGTTTCCTAATCATTAGTAAATTATTCATATAATCTTTTACATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTTCCTAATCATTAGTAAATTATTCATATAATCTTTTACATCTG  350

seq1  TGGAAGCTGGACCAATCATATTTTTCTAGAAACTTGACTATTTCATCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTGGACCAATCATATTTTTCTAGAAACTTGACTATTTCATCCAA  400

seq1  AATTTCAAATGTTCTGCCCTAGTGTTACTCTCTTTAGCAACCCTACTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAAATGTTCTGCCCTAGTGTTACTCTCTTTAGCAACCCTACTAAC  450

seq1  AAAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGATGAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGATGAAGGG  500

seq1  GTGTGTGACCCTATAGGTGGAACAACAATATGAACTAATCAGTACCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGACCCTATAGGTGGAACAACAATATGAACTAATCAGTACCCCCA  550

seq1  AAGCTCGTGTCTCTAGCTGCATACGTAGCAGAAAATGGCCTAGTTGGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCGTGTCTCTAGCTGCATACGTAGCAGAAAATGGCCTAGTTGGCCA  600

seq1  TCAATAGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTA  650

seq1  CAGGGGAACGCCAGAGCCAAGAAGTGGGAGTGAGTAGGTAGGGAATCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAACGCCAGAGCCAAGAAGTGGGAGTGAGTAGGTAGGGAATCAGG  700

seq1  GTGGGGGAAGG  711
      |||||||||||
seq2  GTGGGGGAAGG  711