BAC Information

Click to search

BAC

Clone NameB6Ng01-092E23
Chromosome12 (Build37)
Map Location 20,076,822 - 20,077,572
singlet/doubletsinglet
Overlap geneLOC100042727
Upstream geneEG668413, LOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594, EG668600
Downstream geneLOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377, LOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092E23.bB6Ng01-092E23.g
ACCDH904104DH904105
length7551,041
definitionDH904104|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E23, 5' end.DH904105|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccattcggcttgtaccatggtcaactccccatgcaaaacacctt
cctttaccctttatccctggcttcttaaggctgtgagaaggaccacagac
agaacatggtccctatcattgcatccccaactaactgtccctacatcttg
tcccgctaaagtgccctggaggatttcactgttttgtagggggcgagcta
cccacactgtctcactggccctttcctgaggttctggtggggaattcagg
gggttctgaggctaacgttgggattggggagcaaaagggtgggctccctt
ccagctgggaagcagtatccccggttccactccacgccctctgggcaatg
ttgctagaggtcatggcgggtgcggggtgggagccgggaaccgcagctca
tgagagggcgcgccctcgaaccccagcacctccggaaggcagacgcaacg
cagcagcccacagccactgacaggccctgatcgcacatagccctccttgc
ccaggccttcccttcctggcggcgcggtagcggcgggcaacccgtttggc
ggccaggcctgcgccccgccccgccgggcggggactccgcgccctcccca
gccgggccctcccctttccgcgggaggcgtccggtacagcggcttggtgg
cgcgcagttcccgctgactgtgcgcgcccccctctttggctccttttgca
gaggactcggtagctgcagccccccagagcacagccgggcagagctgcag
gctgc
gaattctcctcgaggcacggaagaacgtccgagatggagccgggcggccg
gtccaaacctcggttgagatagacgaaggatttcccttgactcgccccca
atgggattataatacagcacaaggtagggaacggctgtccaattaccggc
gggcactagtcgcgggtctcagaggggctgctcgtaagcccacaaatttg
gctaaggtaagggaagttatgcaggggccagctgagcccccctcagtctt
tttagaaagactcatggaggcttataggaggtataccccgtttgaccctg
cgtcagaggggcagcgggcttcagtgatcatggcctatatagggcagtca
gctcctgatattagaaggaagctgcagcggattgaaggattgcaagatta
tactataagggatgtggttcgagaggctgagaaagtgtatcacaagagag
aaacagaggaagagaagttagagagagaaaggaaagagagaagggaagat
gaagataagagagacaggaggcaggagaaagctctgactcggattctggc
cacagtggtagatagagatagggatagggctagacagacaggggacctga
gagatgaaaagaggcaggggccaaggagacccagaaaagaccgaccacgc
ctagaaaaagaccaatgtgcatactgcaaaaagaaaggtcactgggccaa
cgagtgtcctgaaaagaagcaagggtcacgagtattgtctcttggagaag
aggaagactaggggagacggggctcggcccccctccccgagcctagggta
actcttagaagtggaggggactccctgtaaattttctggtcgatacaggc
gcagatttttcagtgctttaaaactccgctagtgcaaatttaaggaagaa
tgagaaaccttagtaattgggggccacaggacaagtctactcgttgacta
cgaccaggacagtagacctgggacggaatcagtgactcactcatcctggt
catccagaggtgcccttagtctcctgctaggagaggattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_20076822_20077572
seq2: B6Ng01-092E23.b_44_798

seq1  GAATTCCCATTCGGCTTGTACCATGGTCAACTCCCCATGCAAAACACCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTCGGCTTGTACCATGGTCAACTCCCCATGCAAAACACCTT  50

seq1  CCTTTACCCTTTATCCCTGGCTTCTTAAGGCTGTGAGAAGGACCACAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACCCTTTATCCCTGGCTTCTTAAGGCTGTGAGAAGGACCACAGAC  100

seq1  AGAACATGGTCCCTATCATTGCATCCCCAACTAACTGTCCCTACATCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATGGTCCCTATCATTGCATCCCCAACTAACTGTCCCTACATCTTG  150

seq1  TCCCGCTAAAGTGCCCTGGAGGATTTCACTGTTTTGTAGGGGGCGAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCTAAAGTGCCCTGGAGGATTTCACTGTTTTGTAGGGGGCGAGCTA  200

seq1  CCCACACTGTCTCACTGGCCCTTTCCTGAGGTTCTGGTGGGGAATTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTGTCTCACTGGCCCTTTCCTGAGGTTCTGGTGGGGAATTCAGG  250

seq1  GGGTTCTGAGGCTAACGTTGGGATTGGGGAGCAAAAGGGTGGGCTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTGAGGCTAACGTTGGGATTGGGGAGCAAAAGGGTGGGCTCCCTT  300

seq1  CCAGCTGGGAAGCAGTATCCCCGGTTCCACTCCACGCCCTCTGGGCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGGAAGCAGTATCCCCGGTTCCACTCCACGCCCTCTGGGCAATG  350

seq1  TTGCTAGAGGTCATGGCGGGTGCGGGGTGGGAGCCGGGAACCGCAGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGAGGTCATGGCGGGTGCGGGGTGGGAGCCGGGAACCGCAGCTCA  400

seq1  TGAGAGGGCGCGCCCTCGAACCCCAGCACCTCCGGAAGGCAGACGCAACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGGCGCGCCCTCGAACCCCAGCACCTCCGGAAGGCAGACGCAACG  450

seq1  CAGCAGCCCACAGCCACTGACAGGCCCTGATCGCACATAGCCCTCCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCCACAGCCACTGACAGGCCCTGATCGCACATAGCCCTCCTTGC  500

seq1  CCAGGCCTTCCCTTCCTGGCGGCGCGGTAGCGGCGGGCAACCCGTTTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTTCCCTTCCTGGCGGCGCGGTAGCGGCGGGCAACCCGTTTGGC  550

seq1  GGCCAGGCCTGCGCCCCGCCCCGCCGGGCGGGGACTCCGCGCCCTCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGCCTGCGCCCCGCCCCGCCGGGCGGGGACTCCGCGCCCTCCCCA  600

seq1  GCCGGGCCCTCCCCTTTCCGCGGGAGGCGTCCGGTACAGCGGCTTGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGCCCTCCCCTTTCCGCGGGAGGCGTCCGGTACAGCGGCTTGGTGG  650

seq1  CGCGCAGTTCCCGCTGACTGTGCGCGCCCCCCTC-TTGGCTCC-TTTGCA  698
      |||||||||||||||||||||||||||||||||| |||||||| ||||||
seq2  CGCGCAGTTCCCGCTGACTGTGCGCGCCCCCCTCTTTGGCTCCTTTTGCA  700

seq1  GAGGACTCGGTAGCTGCAG-CCCCCAGAGCACAG-CGGGCAGAGCTGCAG  746
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  GAGGACTCGGTAGCTGCAGCCCCCCAGAGCACAGCCGGGCAGAGCTGCAG  750

seq1  GCTGC  751
      |||||
seq2  GCTGC  755