BAC Information

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BAC

Clone NameB6Ng01-096C14
Chromosome12 (Build37)
Map Location 82,857,391 - 83,010,822
singlet/doubletdoublet
Overlap geneMap3k9, Pcnx
Upstream geneGm1568, 4933426M11Rik, Sfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821
Downstream geneSipa1l1, LOC432675, EG666911, Rgs6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096C14.bB6Ng01-096C14.g
ACCDH906902DH906903
length283518
definitionDH906902|Mus musculus domesticus DNA, BAC clone: B6Ng01-096C14, 5' end.DH906903|Mus musculus domesticus DNA, BAC clone: B6Ng01-096C14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,010,540 - 83,010,822)(82,857,391 - 82,857,914)
sequence
attattcttcctctgaagtcaaccccttttctaggccactttgaaggcaa
ctatgactttgagaaaagactttgtattagctccttagtaacagatcaca
gacaatggttacttgggtcacaatgtctttgacagtaagaataagtctct
atcatcatctttgaccaagtcatgatcctagaccaaatatttaccttgaa
tatttacaagcactaaattatttcaaagaagacaagaggcaaacagaagg
ggaaagtgcaggcaggggtggggggtgggggtg
tccttatcttctctgtccaagagcaaggaggccagtttcagtcttttctc
actcactgtccttcacattatgctgtggaatctccatgacatctccatgg
caagccctgtttctcaagaggcagtccctggatgtgggcaggtcaggagg
cattgagtgttttggcttagctcagctccagaggagcaatctgcttcctt
attggagacataccataagtaaccagaatgtccaacttgtgtggttgggc
aaactcagaaccatatggattctttaggtggagtgtccggggcagaggaa
ggacggtctgtgttttactcctgtgggaatgcactaggcctaacaaactg
ctaaggaagggttctaatgcctcactccctgtccataatgaactcccagg
tgaagagaggagtcttaaaatatttctcttagtggtaaggggatgaatca
tggatgaaggtcacaaaaataagaaaggaaggaaggaaggaaggaaagaa
gggagggagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_83010540_83010822
seq2: B6Ng01-096C14.b_51_333 (reverse)

seq1  CACCCCCACCCCCCACCCCTGCCTGCACTTTCCCCTTCTGTTTGCCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCACCCCCCACCCCTGCCTGCACTTTCCCCTTCTGTTTGCCTCTT  50

seq1  GTCTTCTTTGAAATAATTTAGTGCTTGTAAATATTCAAGGTAAATATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTTGAAATAATTTAGTGCTTGTAAATATTCAAGGTAAATATTTG  100

seq1  GTCTAGGATCATGACTTGGTCAAAGATGATGATAGAGACTTATTCTTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGATCATGACTTGGTCAAAGATGATGATAGAGACTTATTCTTACT  150

seq1  GTCAAAGACATTGTGACCCAAGTAACCATTGTCTGTGATCTGTTACTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGACATTGTGACCCAAGTAACCATTGTCTGTGATCTGTTACTAAG  200

seq1  GAGCTAATACAAAGTCTTTTCTCAAAGTCATAGTTGCCTTCAAAGTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAATACAAAGTCTTTTCTCAAAGTCATAGTTGCCTTCAAAGTGGCC  250

seq1  TAGAAAAGGGGTTGACTTCAGAGGAAGAATAAT  283
      |||||||||||||||||||||||||||||||||
seq2  TAGAAAAGGGGTTGACTTCAGAGGAAGAATAAT  283

seq1: chr12_82857391_82857914
seq2: B6Ng01-096C14.g_69_592

seq1  GAATTCTCCTTATCTTCTCTGTCCAAGAGCAAGGAGGCCAGTTTCAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTATCTTCTCTGTCCAAGAGCAAGGAGGCCAGTTTCAGTCT  50

seq1  TTTCTCACTCACTGTCCTTCACATTATGCTGTGGAATCTCCATGACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACTCACTGTCCTTCACATTATGCTGTGGAATCTCCATGACATCT  100

seq1  CCATGGCAAGCCCTGTTTCTCAAGAGGCAGTCCCTGGATGTGGGCAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCAAGCCCTGTTTCTCAAGAGGCAGTCCCTGGATGTGGGCAGGTC  150

seq1  AGGAGGCATTGAGTGTTTTGGCTTAGCTCAGCTCCAGAGGAGCAATCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCATTGAGTGTTTTGGCTTAGCTCAGCTCCAGAGGAGCAATCTGC  200

seq1  TTCCTTATTGGAGACATACCATAAGTAACCAGAATGTCCAACTTGTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATTGGAGACATACCATAAGTAACCAGAATGTCCAACTTGTGTGG  250

seq1  TTGGGCAAACTCAGAACCATATGGATTCTTTAGGTGGAGTGTCCGGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCAAACTCAGAACCATATGGATTCTTTAGGTGGAGTGTCCGGGGCA  300

seq1  GAGGAAGGACGGTCTGTGTTTTACTCCTGTGGGAATGCACTAGGCCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGACGGTCTGTGTTTTACTCCTGTGGGAATGCACTAGGCCTAAC  350

seq1  AAACTGCTAAGGAAGGGTTCTAATGCCTCACTCCCTGTCCATAATGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTAAGGAAGGGTTCTAATGCCTCACTCCCTGTCCATAATGAACT  400

seq1  CCCAGGTGAAGAGAGGAGTCTTAAAATATTTCTCTTAGTGGTAAGGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTGAAGAGAGGAGTCTTAAAATATTTCTCTTAGTGGTAAGGGGAT  450

seq1  GAATCATGGATGAAGGTCACAAAAATAAGAAAGGAAGGAAGGAAGGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATGGATGAAGGTCACAAAAATAAGAAAGGAAGGAAGGAAGGAAGG  500

seq1  AAAGAAGGGAGGGAGGGAGGGAGG  524
      ||||||||||||||||||||||||
seq2  AAAGAAGGGAGGGAGGGAGGGAGG  524