BAC Information

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BAC

Clone NameB6Ng01-096G07
Chromosome12 (Build37)
Map Location 33,286,973 - 33,288,012
singlet/doubletsinglet
Overlap genenone
Upstream geneBcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik, LOC100043548
Downstream genePbef1, LOC100043553, 4933406C10Rik, Sypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb, LOC668801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096G07.bB6Ng01-096G07.g
ACCDH907057DH907058
length1,2751,035
definitionDH907057|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G07, 5' end.DH907058|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagactttcaaagaagagctaataccaatactccacaaact
attccacaaaatagaaaaagaaagaaatttgcgaaactcattatatgaga
acaacattagcctgatacttaaagactcaacaaagaaagaatttcaggtc
attttcccttatgaacattaatgcaaaaatactcaataaaattctaacaa
actgaatccaagaatacatcaaagacatcattcaccatgtgatcatgcct
cattctagagatgcaggtgtggttcaatatatgaaaatccaacaacataa
ttcaccatattaaaaaaaactgaaagaataaaaccccacatgatcatttc
attagatgctggaaaagcctttgacaaaatccaactcctctacatgttaa
acgccatggagacatcagggatacaagtttcacatctaaacacagtaaag
gcaatacacaacaagccaatagctaacatcaaattaaatggagagggatt
taaatcaattccactaaaattggagagaagacacggttgtccactctctc
catatctttctttaacctagtacttgaagtcctagctagagcagtaaggc
aactaaaggagatcaagagaatataaattggaaagcacatcaaagtctca
ctatttgcaggtgatacataaataatactatacataagtgaccccaattg
ttctaccagagaattcctacagctgataaacaccttcagcaaagtggctg
tatacaaaattaattcaaagaaatctgtagccctcctttctatgaatgat
aattgagctgataaggaaattagggaagtaaaatactttacaataggcac
aaataatataaaatatcttggtataactctaactaagcaagtgaaagacc
tatatgacaagaacttcaagtcactgaggaaaaaattgaggaagtatcag
aagatggaaagatcttccatgatcatgggtaggtaggattaacatagtta
aaatggcccatcctaccaaagcaatctttagagtaaacgcaaaattcaac
caaattccacacagttcttaaagactgaagaacaattctcactttgtatg
aaagacaacaaacccaggatagctacaatcatgtacaataaagactcggg
aaattcctactcttgactcagttggtctcccagttacggataaaacctgg
cctggatcgaatgacgcgtgccatgatgatcagctgaaaattcccaccta
tagacctgtatttgacagagccact
gaattcactgtgatgttgattaaacgaagttctataaaagcttgttgata
gaagggtgatggctactgggtaaataattgctataaactgtcaaaatgtg
ccagcacagccaccgtaatagcatgttaggagctgcagcgcccgtaggtc
agctctcaccatgttagatgagttcccctttcccctgctgattctcatta
acattacattgtcatagtaacagaatgccagcactgccaaatgcataaac
cacatgtgataaaacaagccacgggtctagtttaactccacagctgacat
tcagatttaacaaagctgtctgcttacagcctatattttcgggaagctgg
ctacaaaatgtgcacacgtactggtatttggcttttcttttttgcaaggt
tttgagttaagtgatagagggttgggggaatggatgctttcatgggtaaa
gtgcttgctctgaaaccttcaggatctaagcctggatccccaacacctac
acaaaagctatgtgtaagccacgaggtggcggtgcatgttttcaatctca
gcacacaggaggcaagaagttccaggcccgcctggtcttacagagtaagt
tccaggacagccagggctacacagagaaaccctgtctcagaaaataaaca
aaacagatagacatacagacaaacaaacagctaggtgtgtcagtgcaccc
ctatagctctaactttagaagtttggaggcagaaggatggcagaagctcc
caggccaggatatccagcccatcaatgcattccagcgtcagagagaccct
gtctcaaaaacaaaagtgaaagggccagtgaactggtttccagtacaaac
ttgaaagccatcccaggaacctaggctggaaagagagaactgacttccca
aagttgtcctttgattccatatacatggtacacatacatctataattgta
cacatatagaaaacaaataaaaattaaagtacatgtatcgttctatgtct
actttcacccaagaagatacaactgtgtgatataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_33286973_33288012
seq2: B6Ng01-096G07.g_67_1101

seq1  GAATTCACTGTGATGTTGATTAAACGAAGTTCTATAAAAGCTTGTTGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGATGTTGATTAAACGAAGTTCTATAAAAGCTTGTTGATA  50

seq1  GAAGGGTGATGGCTACTGGGTAAATAATTGCTATAAACTGTCAAAATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTGATGGCTACTGGGTAAATAATTGCTATAAACTGTCAAAATGTG  100

seq1  CCAGCACAGCCACCGTAATAGCATGTTAGGAGCTGCAGCGCCCGTAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACAGCCACCGTAATAGCATGTTAGGAGCTGCAGCGCCCGTAGGTC  150

seq1  AGCTCTCACCATGTTAGATGAGTTCCCCTTTCCCCTGCTGATTCTCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCACCATGTTAGATGAGTTCCCCTTTCCCCTGCTGATTCTCATTA  200

seq1  ACATTACATTGTCATAGTAACAGAATGCCAGCACTGCCAAATGCATAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACATTGTCATAGTAACAGAATGCCAGCACTGCCAAATGCATAAAC  250

seq1  CACATGTGATAAAACAAGCCACGGGTCTAGTTTAACTCCACAGCTGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGATAAAACAAGCCACGGGTCTAGTTTAACTCCACAGCTGACAT  300

seq1  TCAGATTTAACAAAGCTGTCTGCTTACAGCCTATATTTTCGGGAAGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTAACAAAGCTGTCTGCTTACAGCCTATATTTTCGGGAAGCTGG  350

seq1  CTACAAAATGTGCACACGTACTGGTATTTGGCTTTTCTTTTTTGCAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAATGTGCACACGTACTGGTATTTGGCTTTTCTTTTTTGCAAGGT  400

seq1  TTTGAGTTAAGTGATAGAGGGTTGGGGGAATGGATGCTTTCATGGGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTAAGTGATAGAGGGTTGGGGGAATGGATGCTTTCATGGGTAAA  450

seq1  GTGCTTGCTCTGAAACCTTCAGGATCTAAGCCTGGATCCCCAACACCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGCTCTGAAACCTTCAGGATCTAAGCCTGGATCCCCAACACCTAC  500

seq1  ACAAAAGCTATGTGTAAGCCACGAGGTGGCGGTGCATGTTTTCAATCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCTATGTGTAAGCCACGAGGTGGCGGTGCATGTTTTCAATCTCA  550

seq1  GCACACAGGAGGCAAGAAGTTCCAGGCCCGCCTGGTCTTACAGAGTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGGAGGCAAGAAGTTCCAGGCCCGCCTGGTCTTACAGAGTAAGT  600

seq1  TCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAGAAAATAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAGAAAATAAACA  650

seq1  AAACAGATAGACATACAGACAAACAAACAGCTAGGTGTGTCAGTGCACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATAGACATACAGACAAACAAACAGCTAGGTGTGTCAGTGCACCC  700

seq1  CTATAGCTCTAACTTTAGAAG-TTGGAGGCAGAAGGATGGCAGAAGCTCC  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTATAGCTCTAACTTTAGAAGTTTGGAGGCAGAAGGATGGCAGAAGCTCC  750

seq1  CAGGCCAGGATATCCAGCCCATCAATGCATTCCAGCGTCAGAGAGACCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAGGATATCCAGCCCATCAATGCATTCCAGCGTCAGAGAGACCCT  800

seq1  GTCTCAAAAACAAAAGTG-AAGGGCCAGTGAACTGGTTTCCAGTACAAAC  848
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTCTCAAAAACAAAAGTGAAAGGGCCAGTGAACTGGTTTCCAGTACAAAC  850

seq1  TTGAAGGCCATCCCAGGAACCTAGGCTGGAAGGAGAGAACTGACTTCCCA  898
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGAAAGCCATCCCAGGAACCTAGGCTGGAAAGAGAGAACTGACTTCCCA  900

seq1  AAGTTGTCCTTTGATTTCCATATACAATGGTACACATACATCTATATTTG  948
      |||||||||||||| |||||||||| |||||||||||||||||||| |||
seq2  AAGTTGTCCTTTGA-TTCCATATAC-ATGGTACACATACATCTATAATTG  948

seq1  TACACATATTAGAAAACAAATAAAAATTAAAAGTACATGGTAGGTGTTCT  998
      |||||||| ||||||||||||||||||| ||||||||| |||   |||||
seq2  TACACATA-TAGAAAACAAATAAAAATT-AAAGTACAT-GTA-TCGTTCT  994

seq1  ATGTCTACTTTTCACCCCAGAAG-TACAACTGTGTGTATATAA  1040
      |||||||| |||||||| ||||| |||||||||||| ||||||
seq2  ATGTCTAC-TTTCACCCAAGAAGATACAACTGTGTG-ATATAA  1035