BAC Information

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BAC

Clone NameB6Ng01-101B03
Chromosome9 (Build37)12 (Build37)
Map Location 96,718,221 - 96,718,6954,885,315 - 4,886,175
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAI427122, 1700065D16Rik, Xrn1, Gk5, Tfdp2, 1110029I05Rik, Atp1b3, BC043934, Rnf7, LOC667174, Rasa2, Zbtb38, EG622512, LOC100040230, LOC667216
Downstream geneAcpl2, LOC19034, LOC667226, Spsb4, LOC100040254, Slc25a36, EG622727, LOC384971, Trim42, Clstn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101B03.bB6Ng01-101B03.g
ACCDH910374DH910375
length944864
definitionDH910374|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B03, 5' end.DH910375|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(96,718,221 - 96,718,695)(4,885,315 - 4,886,175)
sequence
gaattcttgcatgttaatatgcaatctttttcacaagtttagatataatg
aacatctgacaatatttcttctacctagaaatttctattctgtagttatt
ttccatcttttaaacacattacaatgagcctatgtaatgtaaacgataaa
taagaacctaacacaaatgactaagagcagatgtcgtaacacatgcctat
aatcccaacctgtaggtggctgaggccaaaggactgcaagttccaagaca
gatggggttacagagcaaatgtgaggccagcctgggctacacagcaagac
ttacacacagacacacacacacacacacacacacacacacaaacacacgc
atacaaacaaatcattagagattagagattttctaaagaagaactatttt
tatttcatgagcatcctcaccaattattcacaaatgtttcacacattaaa
ccttttgaataaaataaaaggcgttaggcattggcatagcctcacatgag
acagctatataagggtcctttcttttttttttttattacatattttcctc
aattacatttccaatgctatcccaaaagtccctcataccctccccccccc
cacttccctacccacccattcccatttttttggccctggcgttcccctgt
actagggcatatacagtttgcgtgtccaatgggcctctcttttccagtga
tggccgactaagccatcttttgatacatatgcagctagagtcaagagctc
cggggtactggttagttcataatgttgttccacctataaggttgcagatc
cctttagctccttgggtactttctctagctcctccattgggagccatgtg
atccatccattagctgactgtgagcatccacttctgtgttttgctaggcc
ccggcatagtctcacaagagacagctacatctgggtcctttcga
gaattcctgcatttacaccaaatacctacgagtcactcaaggttccaagt
gcagctgtcacccatctcagacagtgacgcacaatgcttgtgacaggggc
aggaaacagactctcattctgtagcccaagctggccctgacttcacagta
atcctcctgcctcagcctctcaagggcttgtgatcagtgtgaattcccat
gtttggccaggactcccaaatgaccccttgtcaaactgtcttttctaatc
atatagttaaatgtttctttttcattcccacaaatggagtgttgtcttct
agagactataagctaggtgacactgcatcacagtgaatgtgaaacaggta
agaatcttttgtgggttttttgttttgtttttttttttcgagacagggtt
tctctgtatagccctggctgtcctggaactcactctgtagaccaggctgt
ccttgaactcagaaatccgcctgcctctgcctccagagcgctgggattaa
aggcatgtacaaccacacccagccaggtgagaatctttatcttcattgtt
agacattacatttttggagaaaaggaaatacaacaccacctttctctata
aatctttccactcgttgaaaattattagtttaatatgcatgatatttttg
tctgcgtgtatgtctacgtataacttgagtgcagtgaccacagaggccag
aagagggagtttggatatcttgtagcagaagtttatatggctgtgcactg
ccatgtgtatgctgggaaattgaacctgggatctacagccagggcagcca
gagtttttttgtttgtttgtttgtttgttttgctttttgtttgtttttcg
agagagggtttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_96718221_96718695
seq2: B6Ng01-101B03.b_566_983 (reverse)

seq1  GACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGC-AAAC  49
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAAAC  50

seq1  ACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGCTCCCA  99
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCACATGGCTCCCA  100

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCAACCCT  149
      |||||||||||||||||||||||||||||||||||||||||| ||||| |
seq2  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCTT  150

seq1  ATAGGTGGAACAACATTATGAACTAACCAGTACCCCTGAGCTCTTGACTC  199
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTC  200

seq1  TAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGG-AAAGA  248
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  TAGCTGCATATGTATCAAAAGATGGCTTAGTCGGCCATCACTGGAAAAGA  250

seq1  GAGGCCCATTGGACACGCAGACTTTGTGTGCCCCGGTACAGGGGAACGCC  298
      ||||||||||||||||||| ||| | | |||||  |||||||||||||||
seq2  GAGGCCCATTGGACACGCAAACTGTATATGCCCTAGTACAGGGGAACGCC  300

seq1  AGGGCC--AAAGGGGGGAAGTGGGTGGGTAGGGGAGT-GGGGGTGGGTGG  345
      ||||||  |||   ||||| ||||||||||||| ||| ||||| ||| ||
seq2  AGGGCCAAAAAAATGGGAA-TGGGTGGGTAGGGAAGTGGGGGGGGGGAGG  349

seq1  GTAAGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACC  395
      ||| | ||||||||||| |||||||||||||||||| ||||  |||||  
seq2  GTATGAGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAAATATG  399

seq1  TAATAAAAAATGGAAAAAAAAAATAAAAAAATAAAAGTAGTAAAAATTTT  445
      ||||||||||   |||||| ||                            
seq2  TAATAAAAAA---AAAAAAGAA----------------------------  418

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAGAA  475
                                    
seq2  ------------------------------  418

seq1: chr12_4885315_4886175
seq2: B6Ng01-101B03.g_71_934

seq1  GAATTCCTGCATTTACACCAAATACCTACGAGTCACTCAAGGTTCCAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCATTTACACCAAATACCTACGAGTCACTCAAGGTTCCAAGT  50

seq1  GCAGCTGTCACCCATCTCAGACAGTGACGCACAATGCTTGTGACAGGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGTCACCCATCTCAGACAGTGACGCACAATGCTTGTGACAGGGGC  100

seq1  AGGAAACAGACTCTCATTCTGTAGCCCAAGCTGGCCCTGACTTCACAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACAGACTCTCATTCTGTAGCCCAAGCTGGCCCTGACTTCACAGTA  150

seq1  ATCCTCCTGCCTCAGCCTCTCAAGGGCTTGTGATCAGTGTGAATTCCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTGCCTCAGCCTCTCAAGGGCTTGTGATCAGTGTGAATTCCCAT  200

seq1  GTTTGGCCAGGACTCCCAAATGACCCCTTGTCAAACTGTCTTTTCTAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCCAGGACTCCCAAATGACCCCTTGTCAAACTGTCTTTTCTAATC  250

seq1  ATATAGTTAAATGTTTCTTTTTCATTCCCACAAATGGAGTGTTGTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTAAATGTTTCTTTTTCATTCCCACAAATGGAGTGTTGTCTTCT  300

seq1  AGAGACTATAAGCTAGGTGACACTGCATCACAGTGAATGTGAAACAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTATAAGCTAGGTGACACTGCATCACAGTGAATGTGAAACAGGTA  350

seq1  AGAATCTTTTGTGGGTTTTTTGTTTTGTTTTTTTTTTTCGAGACAGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTTTTGTGGGTTTTTTGTTTTGTTTTTTTTTTTCGAGACAGGGTT  400

seq1  TCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGT  450

seq1  CCTTGAACTCAGAAATCCGCCTGCCTCTGCCTCCAGAGCGCTGGGATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAACTCAGAAATCCGCCTGCCTCTGCCTCCAGAGCGCTGGGATTAA  500

seq1  AGGCATGTACAACCACACCCAGCCAGGTGAGAATCTTTATCTTCATTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGTACAACCACACCCAGCCAGGTGAGAATCTTTATCTTCATTGTT  550

seq1  AGACATTACATTTTTGGAGAAAAGGAAATACAACACCACCTTTCTCTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTACATTTTTGGAGAAAAGGAAATACAACACCACCTTTCTCTATA  600

seq1  AATCTTTCCACTCGTTGAAAATTATTAGTTTAATATGCATGATA-TTTTG  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATCTTTCCACTCGTTGAAAATTATTAGTTTAATATGCATGATATTTTTG  650

seq1  TCTGCGTGTATGTCTACGTATAACTTGAGTGCAGTGACCACAGAGGCCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCGTGTATGTCTACGTATAACTTGAGTGCAGTGACCACAGAGGCCAG  700

seq1  AAGAGGGAG-TTGGATATCTTGTAGCAGAAGTTTCATATGGCTGTGCACT  748
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  AAGAGGGAGTTTGGATATCTTGTAGCAGAAGTTT-ATATGGCTGTGCACT  749

seq1  GCCATGTGTATGCT-GGAAATTGAACCT-GGATCTACAGCCAGGGCAGCC  796
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  GCCATGTGTATGCTGGGAAATTGAACCTGGGATCTACAGCCAGGGCAGCC  799

seq1  AGTGTTTTTTTGTTTGTTTGTTTGTTTGTTTTGCTTTTTGTTTGTTTTTC  846
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTTTTGTTTGTTTGTTTGTTTGTTTTGCTTTTTGTTTGTTTTTC  849

seq1  GAGAGAGGGTTTCTC  861
      |||||||||||||||
seq2  GAGAGAGGGTTTCTC  864