BAC Information

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BAC

Clone NameB6Ng01-102D06
Chromosome12 (Build37)
Map Location 95,502,268 - 95,503,367
singlet/doubletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102D06.bB6Ng01-102D06.g
ACCDH911162DH911163
length1,2761,082
definitionDH911162|Mus musculus domesticus DNA, BAC clone: B6Ng01-102D06, 5' end.DH911163|Mus musculus domesticus DNA, BAC clone: B6Ng01-102D06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagtcaacctccaaaaaaaccaaattgggagcagagttaaa
cagaaaactcacaaccaaagaatctcacacggctgagaagtacttaaaga
aatgtataaagtccttagtcatcacatcaaccatgggataccaccttaca
ccaatcagaaagcctaagatcaaaaactcaagtgatagcacatgctgatg
aggatgtgggtaaagaggaatactcatccattgctggtggaattacaaac
tggtacaccatcctgggaatgaatctgacagttcctcagaaaatttcaaa
gagttctacctgaagactgagatttactgcttctgggtatataccctaat
aatgtcccaccatgccacaaagacatgtgctccactttgttcataggagc
tttattagtaatagtcagataatggaaacaacccacctgtctctcaatcg
aggaatggataccgaaaatggggttcatttacacaatgaatactattcgg
ctcttaaaaacaaggatatcgtgaattttgcagtcaaatagatggaacta
gaaaatatcatcctgagtgagataactcagacccagaagacatgaatggt
tatgcacttgctgattagtggatattagtcaaaaattatagaatacctag
gatacaacaaacagacagtaagaagtgttaacaagaaaaacaggccaagc
aaggatgcttcaatcccacttagaaggggaaagaaaatcatcaaataatc
agagaaatggaggggtctgggtgggaaaggagtgggggaaagcagatctc
ttttctttttatgttatcagtattcattcactaaatagagatctaagata
agaatttgtcactataacttctgaactcctaacaactgaagtcatttcag
caaactgtataagatgactttgcatgtgtagacttctgtccattaacgaa
tagactagaacatttttctcaaaatggtaaatattcatagggaatgatta
tgggcaatctatcactctgcgaagactacccctggatactatgaaaaacg
aagaagatcaatggagtctctaaatgcatcgaaatggaagaatgacgagc
ttctgtattctcaacagggttggtactactctgacctggaaatacggcct
tccccccaattgaacatgctagaaatgacaaatttgcgagatttcgagtt
ctgagcgtcccgattcccacaatggacggctcgagaggatgacttagtac
gttagaaagtagtgttctctccgtcg
gaattcacaatgaaagacacccactgatagcattgctttatgaagcctta
ttatttctattaattcatactaatactggtagctaagcatgagataaagc
ataggaaaatgaaatattaaacacaaataccatgttgaaagtagttactt
ctgttctaaggtccactatccatgccacttgtaaccaccagaatttattc
attgtctgatgagcagttgcttattcaatattcgtgttcttagcctaggg
taaatcctcatgttttctttggctgttagagtccctgttttcgcatattc
agatctttattcattctttcctactagttaatagaagttgcaaggacagt
ttttgctatccttctggatacaggataagattgggttttcttaccccatg
aaactcacacttgaaaactggctaaccttttgtaaaagaaaatccgaaca
aaacaaaaataaaattgacagggtgtcctctactgacaaaaaatgcttta
agaattagaagatgcatattttgacaccttcaaagaagtatttttaatct
gtctttctagaaaaccaagattcttcatcttaggtcttctatattagata
tagatggcgtgaaactgtattccctaatgcacacgatggaagtgcaagtg
cccctttattgtagacagagatgaagtagtcttgtttttgtctctgtgtg
atttagcttaatccgaatgattcatgtggttatatcagtccatccaaatc
ttgccttctcagtatgcaccatttatgccttctccttaattacctttacc
tcccattctgtttttttttttttttttatccaagtgtataagcagcgctc
aaatgaatatgcatgggtactaatgccagactgatgacctagtacgaggc
ataggctttagaaatggtcttacgctgagaacccagcacatagaaagttg
gacgtagttcagagacacatcacgacttgtgagacgcattctacacaact
ctttcccatgtaaagtgtatcatcactgagttgatctgaggctgtatatt
tctcatttgttatgttggctatttttaactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95502268_95503367
seq2: B6Ng01-102D06.g_68_1149

seq1  GAATTCACAATGAAAGACACCCACTGATAGCATTGCTTTATGAAGCCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATGAAAGACACCCACTGATAGCATTGCTTTATGAAGCCTTA  50

seq1  TTATTTCTATTAATTCATACTAATACTGGTAGCTAAGCATGAGATAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTATTAATTCATACTAATACTGGTAGCTAAGCATGAGATAAAGC  100

seq1  ATAGGAAAATGAAATATTAAACACAAATACCATGTTGAAAGTAGTTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAATGAAATATTAAACACAAATACCATGTTGAAAGTAGTTACTT  150

seq1  CTGTTCTAAGGTCCACTATCCATGCCACTTGTAACCACCAGAATTTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTAAGGTCCACTATCCATGCCACTTGTAACCACCAGAATTTATTC  200

seq1  ATTGTCTGATGAGCAGTTGCTTATTCAATATTCGTGTTCTTAGCCTAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTGATGAGCAGTTGCTTATTCAATATTCGTGTTCTTAGCCTAGGG  250

seq1  TAAATCCTCATGTTTTCTTTGGCTGTTAGAGTCCCTGTTTTCGCATATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTCATGTTTTCTTTGGCTGTTAGAGTCCCTGTTTTCGCATATTC  300

seq1  AGATCTTTATTCATTCTTTCCTACTAGTTAATAGAAGTTGCAAGGACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTATTCATTCTTTCCTACTAGTTAATAGAAGTTGCAAGGACAGT  350

seq1  TTTTGCTATCCTTCTGGATACAGGATAAGATTGGGTTTTCTTACCCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTATCCTTCTGGATACAGGATAAGATTGGGTTTTCTTACCCCATG  400

seq1  AAACTCACACTTGAAAACTGGCTAACCTTTTGTAAAAGAAAATCCGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACACTTGAAAACTGGCTAACCTTTTGTAAAAGAAAATCCGAACA  450

seq1  AAACAAAAATAAAATTGACAGGGTGTCCTCTACTGACAAAAAATGCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATAAAATTGACAGGGTGTCCTCTACTGACAAAAAATGCTTTA  500

seq1  AGAATTAGAAGATGCATATTTTGACACCTTCAAAGAAGTATTTTTAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAGAAGATGCATATTTTGACACCTTCAAAGAAGTATTTTTAATCT  550

seq1  GTCTTTCTAGAAAACCAAGATTCTTCATCTTAGGTCTTCTATATTAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCTAGAAAACCAAGATTCTTCATCTTAGGTCTTCTATATTAGATA  600

seq1  TAGATGGCGTGAAACTGTATTCCCTAATGCACACGATGGAAGTGCAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGCGTGAAACTGTATTCCCTAATGCACACGATGGAAGTGCAAGTG  650

seq1  CCCCTTTATTGTAGACAGAGATGAAGTAGTCTTGTTTTTGTCTCTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTATTGTAGACAGAGATGAAGTAGTCTTGTTTTTGTCTCTGTGTG  700

seq1  ATTTAGCTTAATCCGAATGATTCATGTGGTTATATCAGTCCATCCAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTTAATCCGAATGATTCATGTGGTTATATCAGTCCATCCAAATC  750

seq1  TTGCCTTCTCAGTATGCACCATTTATGCCTTCTCCTTAATTACCTTTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCTCAGTATGCACCATTTATGCCTTCTCCTTAATTACCTTTACC  800

seq1  TCCCATTCTG-TTTTTTTTTTTTTTTTATCCAAGTGTATAAGCAGCGCTC  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTCTGTTTTTTTTTTTTTTTTTATCCAAGTGTATAAGCAGCGCTC  850

seq1  AAATGAATATGCAT-GGTACTAATGCCAGACTGATGACCTAGTAGGAGGC  898
      |||||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  AAATGAATATGCATGGGTACTAATGCCAGACTGATGACCTAGTACGAGGC  900

seq1  ATAGGCTTTAGAAA-GGTCTTAGGCTGAGAACCCAGCACATAGAAAGGTT  947
      |||||||||||||| ||||||| ||||||||||||||||||||||| |||
seq2  ATAGGCTTTAGAAATGGTCTTACGCTGAGAACCCAGCACATAGAAA-GTT  949

seq1  GGAAGTAGTTCAGAAGACCACATCAGGAACTTGTGAAGAAGGCATTCTAC  997
      ||| ||||||||| ||| ||||||| | ||||||||   | |||||||||
seq2  GGACGTAGTTCAG-AGA-CACATCACG-ACTTGTGA--GACGCATTCTAC  994

seq1  ACAAACCTCTTTCCCCATGTAAAAGTGTATTCAACCACTAGAGTTTGATA  1047
      ||||  |||||| ||||||| |||||||||   | |||| ||| ||||| 
seq2  ACAA--CTCTTT-CCCATGT-AAAGTGTAT--CATCACT-GAG-TTGAT-  1035

seq1  CTTGGAAAGCTGTATATTTCTCATTTGTATATGTTGGGCTATTTTTATAC  1097
      ||    | |||||||||||||||||||| |||||| ||||||||||| ||
seq2  CT---GAGGCTGTATATTTCTCATTTGT-TATGTT-GGCTATTTTTA-AC  1079

seq1  TTA  1100
      |||
seq2  TTA  1082