BAC Information

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BAC

Clone NameB6Ng01-103F22
Chromosome12 (Build37)1 (Build37)
Map Location 40,286,508 - 40,286,59352,632,695 - 52,633,811
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDgkb, LOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820, Zfp277, Dock4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103F22.bB6Ng01-103F22.g
ACCDH911981DH911982
length3911,104
definitionDH911981|Mus musculus domesticus DNA, BAC clone: B6Ng01-103F22, 5' end.DH911982|Mus musculus domesticus DNA, BAC clone: B6Ng01-103F22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(40,286,508 - 40,286,593)(52,632,695 - 52,633,811)
sequence
tgctatgcatagccaatttgttgtgttccatttctgtattaaagtttcat
ctagttttgctttcatggaattggggcatctgttcccatatggcttgctc
gaagatagcatccattggatggagcacagggtcctcattgaaggaactag
agaaagtacccaaggagctgaaggggtttgcagccctataggaggaaaat
cagtatgaactaaccagaacccccggaactccctgggactaaaccaccaa
tcaaagaaaacacatggtgggacttgggtctctagctgcatatgtagcag
agaatggcctagtcgatcatcagtgggaggagaggcccttggtcctgtga
aggttctgtgccccagtacaggggaatgccagggtcaggaa
gaattcagttccttctgaatcactgaagcaaaattactaagcgcgtcccc
agaggctggctagtgctcttcattgctctgcaccctcaacaatgtatctt
ttggaccaccaagaccttcattgtgaactgattaatctggtcagttagaa
agagacttagtatattcttgtaactcttcacaagggacacttttccctat
gtgtgttatatcttggctatggtcaggatatggaaggattttaaagccat
ttaagcaagccttcccacacaataatcagttctatcacaaaatcttatat
ttctttgaaagatttcctttcctcagtagcttagaaatgtggtcttaaag
agttccttggggaaaggtcatttcctaaattctccactatccgagccctt
agaggagattaaaaactactagtagaggttaaaaccctgggagaaagtgt
tactgcctcttcctaggaaaacagtgtaaggcaagtaagtaagaagaggc
aggcttggggcaagcatccttacccaccaagcagtaccccagctcatggc
gtgtcagttgttctcttgcaagacttcaagtttgttgaattaaaaaaaat
aaaataaaaaacaaacctaatggtttataaggaaaataaaacaaggtaag
ttgctggcaaggcataatttaaaaacacaattcaaataaaacctgtaact
atattcctgtgtttaaaacttacttcactgtagatttacagtctctgcaa
acaccatttgcagaagtcagtgtgctgttagcatgtggtgttaacagaag
tcctttcctttgtcctaaagaatgagaacacagggaagttcctatgtggt
gttactctcagaagttaaagctactgcttatagtggtgaaatataaatgt
gctccaagaaattctccacattttcaggggatatatgttgttgttgttgt
gtgtttctttcactttctaatcttaagccaaatttaattctttgcatgga
gctgaatctgctaaatactttccctgccctttaaatacttggactggatc
tggacttgaaatccatcacaatgagtttgtgggttcatcactctttcact
tcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_40286508_40286593
seq2: B6Ng01-103F22.b_357_441

seq1  GCCTAGTCGTCCATCATTGGGAGGAGAGGCCCTTGGTCTTGTGAAGATTA  50
      |||||||||  ||||| ||||||||||||||||||||| ||||||| || 
seq2  GCCTAGTCGATCATCAGTGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTC  50

seq1  TATGCCCCCAGTACAGGGGAATGCCAGGGCCAGGAA  86
      | || |||||||||||||||||||||||| ||||||
seq2  TGTG-CCCCAGTACAGGGGAATGCCAGGGTCAGGAA  85

seq1: chr1_52632695_52633811
seq2: B6Ng01-103F22.g_66_1169

seq1  GAATTCAGTTCCTTCTGAATCACTGAAGCAAAATTACTAAGCGCGTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCTTCTGAATCACTGAAGCAAAATTACTAAGCGCGTCCCC  50

seq1  AGAGGCTGGCTAGTGCTCTTCATTGCTCTGCACCCTCAACAATGTATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGGCTAGTGCTCTTCATTGCTCTGCACCCTCAACAATGTATCTT  100

seq1  TTGGACCACCAAGACCTTCATTGTGAACTGATTAATCTGGTCAGTTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACCACCAAGACCTTCATTGTGAACTGATTAATCTGGTCAGTTAGAA  150

seq1  AGAGACTTAGTATATTCTTGTAACTCTTCACAAGGGACACTTTTCCCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTAGTATATTCTTGTAACTCTTCACAAGGGACACTTTTCCCTAT  200

seq1  GTGTGTTATATCTTGGCTATGGTCAGGATATGGAAGGATTTTAAAGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTATATCTTGGCTATGGTCAGGATATGGAAGGATTTTAAAGCCAT  250

seq1  TTAAGCAAGCCTTCCCACACAATAATCAGTTCTATCACAAAATCTTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAAGCCTTCCCACACAATAATCAGTTCTATCACAAAATCTTATAT  300

seq1  TTCTTTGAAAGATTTCCTTTCCTCAGTAGCTTAGAAATGTGGTCTTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAAAGATTTCCTTTCCTCAGTAGCTTAGAAATGTGGTCTTAAAG  350

seq1  AGTTCCTTGGGGAAAGGTCATTTCCTAAATTCTCCACTATCCGAGCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTTGGGGAAAGGTCATTTCCTAAATTCTCCACTATCCGAGCCCTT  400

seq1  AGAGGAGATTAAAAACTACTAGTAGAGGTTAAAACCCTGGGAGAAAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATTAAAAACTACTAGTAGAGGTTAAAACCCTGGGAGAAAGTGT  450

seq1  TACTGCCTCTTCCTAGGAAAACAGTGTAAGGCAAGTAAGTAAGAAGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCTCTTCCTAGGAAAACAGTGTAAGGCAAGTAAGTAAGAAGAGGC  500

seq1  AGGCTTGGGGCAAGCATCCTTACCCACCAAGCAGTACCCCAGCTCATGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGGGGCAAGCATCCTTACCCACCAAGCAGTACCCCAGCTCATGGC  550

seq1  GTGTCAGTTGTTCTCTTGCAAGACTTCAAGTTTGTTGAATTAAAAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGTTGTTCTCTTGCAAGACTTCAAGTTTGTTGAATTAAAAAAAAT  600

seq1  AAAATAAAAAACAAACCTAATGGTTTATAAGGAAAATAAAACAAGGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAACAAACCTAATGGTTTATAAGGAAAATAAAACAAGGTAAG  650

seq1  TTGCTGGCAAGGCATAATTTAAAAACACAATTCAAATAAAACCTGTAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGCAAGGCATAATTTAAAAACACAATTCAAATAAAACCTGTAACT  700

seq1  ATATTCCTGTGTTTAAAACTTACTTCACTGTAGATTTACAGTCTCTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCTGTGTTTAAAACTTACTTCACTGTAGATTTACAGTCTCTGCAA  750

seq1  ACACCATTTGCAGAAGTCAGTGTGCTGTTAGCATGTGGTGTTAACAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTTGCAGAAGTCAGTGTGCTGTTAGCATGTGGTGTTAACAGAAG  800

seq1  TCCTTTCCTTTGTCCTAAAGAATGAGAACACAGGGAAGTTCCTATGTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTTTGTCCTAAAGAATGAGAACACAGGGAAGTTCCTATGTGGT  850

seq1  GTTACTCTCAGAAGTTAAAGCTACTGCTTATAGTGGTGAAATATAAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCTCAGAAGTTAAAGCTACTGCTTATAGTGGTGAAATATAAATGT  900

seq1  GCTCCAAGAAATTCTCCACATTTTCAGGGGATATATGTTGTTGTTGTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAAGAAATTCTCCACATTTTCAGGGGATATATGTTGTTGTTGTTGT  950

seq1  GTTGTTTTCTTTCACTTTCTAATCTT-AGCCAAAATTTTAATTCTTTGCA  999
      ||   ||||||||||||||||||||| |||||||  ||||||||||||| 
seq2  GT--GTTTCTTTCACTTTCTAATCTTAAGCCAAA--TTTAATTCTTTGC-  995

seq1  ATGGAGCTGAATCTGCCTAAATACCTTTCCCTGCCCTTTAAATACTTGAA  1049
      ||||||||||||||| ||||||| |||||||||||||||||||||||| |
seq2  ATGGAGCTGAATCTG-CTAAATA-CTTTCCCTGCCCTTTAAATACTTGGA  1043

seq1  CTTGGATTCTGGACTTAAAATCCATTCACAAATGAGTTGTGGGGTTCAAT  1099
      | |||| ||||||||| ||||||| |||| ||||||||   |||||| ||
seq2  C-TGGA-TCTGGACTTGAAATCCA-TCAC-AATGAGTTTGTGGGTTC-AT  1088

seq1  CACTCTTTTTCACTTCAA  1117
      |||||  |||||||||||
seq2  CACTC--TTTCACTTCAA  1104