BAC Information

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BAC

Clone NameB6Ng01-103G15
Chromosome12 (Build37)
Map Location 33,129,686 - 33,130,861
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik
Downstream geneLOC100043548, Pbef1, LOC100043553, 4933406C10Rik, Sypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103G15.bB6Ng01-103G15.g
ACCDH912010DH912011
length1,1591,119
definitionDH912010|Mus musculus domesticus DNA, BAC clone: B6Ng01-103G15, 5' end.DH912011|Mus musculus domesticus DNA, BAC clone: B6Ng01-103G15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttgaaagcaagaacatgaatagaatgccctcccctgtccaaa
ttatctctgtgggaaaggaatatttttaaaaggaatattctcagctcttt
tcacatggccaaaggcaataaaatttaacagcacagatattccctcactg
tacttgtatttgatgaagttaactgtaaacattacttcatgttcagcttg
tttaaataatgaaacaaataactgctttgtttgcactactcttgagctca
aaagagtgctatgtttttcccccacacaggtttttgaaatatatacttca
actctcaagacttagcctcagtggccaaaggatggatcaacatataaaga
cttgaatatatgcatacacactaaataaatgtaataaaaatgccaaagat
aatattaggatagaaaaataagaatgggagtcacctcatggcaaaggaga
atgttttaagaagaaataaaatttctgcttaaataaaataaaaattatat
gactttatagtgtgtgcaatagtaataataaagtgtcttcaaaacatcaa
acatggtcatcctaaccttgacagcagaaggagggaatcttccagttaat
tctagcaccaactatcagctaaatctttctagtaggtcaatagcttagtg
gaaaaccacagtagaaaggatattgggtgggttgaagagcatctcgaaaa
aaaaaaaaaatcaaagtctcggtcccctgtccctgagaacagtgacttat
ttggaaataagatattgccagtatagttaagggttataaaataagattgt
tttacagttagaacaggccctaagtctagttgtaggcatattttcaagag
aaggagcaaaaggtttaacacggagatactataagggaaactatgggaca
ctaaaagcagccattggcattctgacatcatgaatgtataccaaggacga
ccagtagtcaccattgtccagaagacacacgcacagcagatcctcagaga
ctgcagaagactggctctgctgacccttagacttagactctgtcatcccg
cctcagaactgaaagacaaatgctctttaagccactctgttatgaatatt
atcattatgcgaaatctagaaatcaaaccttttgtggtgaacataacaag
tcaatggaa
gaattctttgttcagctctgagccccatctttaagggggctatttgattt
tctggagtccaccctcttgagttctttatatattggatactagtccccta
tctgatttaagataggtaaagatcctttcccaatctgttggtggtctttt
tgtcttattgacggtgtcttttgccttgcagaagctgtgcagtttcatga
ggtcccatttatcgattcttgatcttacagcacaagccattgctgtttaa
ttcaggaaattttcccgtgtgcccatatcttcgaggcttttccccacttt
ctcctctataagtttcagtgtctctggttttatgtggagttccttgatcc
acttagatttgaccttggtacaaggagataggaatgggtcgattcacatt
cttctacatgataacaaccagttgtgccagcaccatttgttgaaaatgct
gtctttcttcaactggatgattttagctcccttgtcgaagatcaagtgac
cataggtgtgtgggttcatttctgggtcttcaattctatcccattggtct
acttgtctgtctctataccagtaccatgcagttttttatcacaattgctt
tgtagtaaactttaggttaggcatggtgattccaccagaggttcttttat
ccttgagaagagtttttgctatcctaggttttttgttatttcagatgaat
ttgaagattgttatttctaatttgttgaagaattgagttggaattttgat
ggggattgcattgaatctgtagattgcttttggcaagatagccattttaa
caatgttaatcctgccaatccatgaacatgggagatctttccatcttctg
agatcttcttaatttcttttttcagagacttgaagttcttatcatacagg
tctttcacttccttagtagagtcactcacgccaggtattttatattattt
gtgactattagaaggtgttgttccctaatttctttctcagcctgatatct
ttgtgtatagaaagacatgactgttgagtaatttatattcagctactcac
tgagctgtttatcagtagagttcccgggggaatttagggtcactatatac
attacagtgcgatctggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_33129686_33130861
seq2: B6Ng01-103G15.b_45_1203 (reverse)

seq1  TTCCATTTGACTTG-TATGCTCACACCAAAAGGTGTTGATTTCTTAGATT  49
      ||||| |||||||| |||| ||||  |||||||| |||||||| ||||||
seq2  TTCCA-TTGACTTGTTATGTTCACCACAAAAGGT-TTGATTTC-TAGATT  47

seq1  TTCTGCAATAAATGATAAATAATCATAAACAGAGTGGCTTAAAAGAGCAT  99
      |   |||   |||||| |||| |||| ||||||||||||| |||||||||
seq2  T--CGCA--TAATGAT-AATATTCAT-AACAGAGTGGCTT-AAAGAGCAT  90

seq1  TGGTTCTTTCAGTTCTTGGGGCGGGGATGGCCAGAGTCTAAAGTCTAAGG  149
      | | ||||||||||| || ||| ||||| | |||||||| ||||||||||
seq2  TTG-TCTTTCAGTTC-TGAGGC-GGGAT-GACAGAGTCT-AAGTCTAAGG  135

seq1  GTCAGCAGAGCCAGTTCTTCCTGCAGTCTCTGAGGTTCTGCTGTGCGTGT  199
      |||||||||||||| |||| ||||||||||||||| ||||||||||||||
seq2  GTCAGCAGAGCCAG-TCTT-CTGCAGTCTCTGAGGATCTGCTGTGCGTGT  183

seq1  GTCTTCTGGACAATGGTGACTACTGGTCGTCCTTGGTATACATTCATGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGGACAATGGTGACTACTGGTCGTCCTTGGTATACATTCATGAT  233

seq1  GTCAGAATGCCAATGGCTGCTTTTAGTGTCCCATAGTTTCCCTTATAGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAATGCCAATGGCTGCTTTTAGTGTCCCATAGTTTCCCTTATAGTA  283

seq1  TCTCCGTGTTAAACCTTTTGCTCCTTTCTCTTGAAAATATGCCTACAACT  349
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTCCGTGTTAAACCTTTTGCTCC-TTCTCTTGAAAATATGCCTACAACT  332

seq1  AGACTTAGGGCCTGTTCTAACTGTAAAACAATCTTATTTTATAACCCTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAGGGCCTGTTCTAACTGTAAAACAATCTTATTTTATAACCCTTA  382

seq1  ACTATACTGGCAATATCTTATTTCCAAATAAGTCACTGTTCTCAGGGACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACTGGCAATATCTTATTTCCAAATAAGTCACTGTTCTCAGGGACA  432

seq1  GGGGACCGAGACTTTGATTTTTTTTTTTTTTCGAGATGCTCTTCAACCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACCGAGACTTTGATTTTTTTTTTTTTTCGAGATGCTCTTCAACCCA  482

seq1  CCCAATATCCTTTCTACTGTGGTTTTCCACTAAGCTATTGACCTACTAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATATCCTTTCTACTGTGGTTTTCCACTAAGCTATTGACCTACTAGA  532

seq1  AAGATTTAGCTGATAGTTGGTGCTAGAATTAACTGGAAGATTCCCTCCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAGCTGATAGTTGGTGCTAGAATTAACTGGAAGATTCCCTCCTT  582

seq1  CTGCTGTCAAGGTTAGGATGACCATGTTTGATGTTTTGAAGACACTTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTCAAGGTTAGGATGACCATGTTTGATGTTTTGAAGACACTTTAT  632

seq1  TATTACTATTGCACACACTATAAAGTCATATAATTTTTATTTTATTTAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTATTGCACACACTATAAAGTCATATAATTTTTATTTTATTTAAG  682

seq1  CAGAAATTTTATTTCTTCTTAAAACATTCTCCTTTGCCATGAGGTGACTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTTTATTTCTTCTTAAAACATTCTCCTTTGCCATGAGGTGACTC  732

seq1  CCATTCTTATTTTTCTATCCTAATATTATCTTTGGCATTTTTATTACATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTATTTTTCTATCCTAATATTATCTTTGGCATTTTTATTACATT  782

seq1  TATTTAGTGTGTATGCATATATTCAAGTCTTTATATGTTGATCCATCCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTGTGTATGCATATATTCAAGTCTTTATATGTTGATCCATCCTT  832

seq1  TGGCCACTGAGGCTAAGTCTTGAGAGTTGAAGTATATATTTCAAAAACCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACTGAGGCTAAGTCTTGAGAGTTGAAGTATATATTTCAAAAACCT  882

seq1  GTGTGGGGGAAAAACATAGCACTCTTTTGAGCTCAAGAGTAGTGCAAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGGGAAAAACATAGCACTCTTTTGAGCTCAAGAGTAGTGCAAACA  932

seq1  AAGCAGTTATTTGTTTCATTATTTAAACAAGCTGAACATGAAGTAATGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTATTTGTTTCATTATTTAAACAAGCTGAACATGAAGTAATGTT  982

seq1  TACAGTTAACTTCATCAAATACAAGTACAGTGAGGGAATATCTGTGCTGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTAACTTCATCAAATACAAGTACAGTGAGGGAATATCTGTGCTGT  1032

seq1  TAAATTTTATTGCCTTTGGCCATGTGAAAAGAGCTGAGAATATTCCTTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTATTGCCTTTGGCCATGTGAAAAGAGCTGAGAATATTCCTTTT  1082

seq1  AAAAATATTCCTTTCCCACAGAGATAATTTGGACAGGGGAGGGCATTCTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTCCTTTCCCACAGAGATAATTTGGACAGGGGAGGGCATTCTA  1132

seq1  TTCATGTTCTTGCTTTCAAGTGAATTC  1176
      |||||||||||||||||||||||||||
seq2  TTCATGTTCTTGCTTTCAAGTGAATTC  1159