BAC Information

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BAC

Clone NameB6Ng01-104A18
Chromosome12 (Build37)
Map Location 83,890,166 - 84,015,492
singlet/doubletdoublet
Overlap geneRgs6
Upstream genePcnx, Sipa1l1, LOC432675, EG666911
Downstream geneDpf3, Wdr21, Zfyve1, LOC626950, Rbm25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104A18.bB6Ng01-104A18.g
ACCDH912457DH912458
length9311,117
definitionDH912457|Mus musculus domesticus DNA, BAC clone: B6Ng01-104A18, 5' end.DH912458|Mus musculus domesticus DNA, BAC clone: B6Ng01-104A18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,014,562 - 84,015,492)(83,890,166 - 83,890,795)
sequence
gaattctgaatgtgtaacacaggcagacatgatgcagctgacactaacct
cactagattataatcacctgtttgtcggtatgcccgtctgacttagggat
atcttgttaacttttatatcactgggacttaatacatcatccattatttc
taaagtaactagtgcaaagatttgctcacttgcttatttattcagggtaa
tcccaggactttgcacatactacaagtctacggcttagctgtacctcagc
cctgtaatgcttttaaaagcttattattgtctgtcaatcaagcctacact
tacatttgaaaatacacatggacaaatcatattatatatttagctcgtag
ataatgtttgattttggatgcattagaattccttgtgatttttttttctt
aacccaccagggatttcttctccttctcagatctgtggaccaaaaataca
gaggcaaccccactgtgtagtacaagaactaataccatgtgttactttta
gtttagctctattttcaatgcaatgatattgctcacttaggaattggttt
taaaactctttgccttcaacaaatttcccactaggggtagtaatcagtca
ttaaaataaaataaggtcataaaatacccaatcgttaaacaaatagttgg
aattagatctgcatatggctcagacctgggttaaagaaaatagctccatt
ttgaaaaccaaaatatattcctctcctttcccagattctctgagtttcct
ttacataacaaataaatccaaccgtagccaggcagttgtggtgcatgcct
ttaatcccagcacttgggagacagaggcagacaggtctctgagtccgagg
ccagcctggcctacagagtgagttccaggacagccaaagctacacagaga
aaccctgtcttggtgggtcggggggtggggg
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tatttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctcagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgccgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgcctcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
aggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcaggccgggcagacccccgtgc
tctcaccaggaaggtggccggctgtctggagctgaagatggcgccgccca
gaagctctgcgactctcgcccgtcccagaaacggctggcactctgtattc
cacacggtcacccgtgcagcctgccctccgcggagtcccggagccagaag
ctcccgccggcgcctgtgccacaaacctctcagccaggcagaccccgtgc
tctcaccaggaagtggccggctgtctctgatagactctagagtaaggagt
agggcttctgaaagagctcaggagttgatctctgaggctagatctgaatc
ttggcatccaaggaaagctgtgccaaggcagcattatgccttgttgtcta
acggatggggagggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_84014562_84015492
seq2: B6Ng01-104A18.b_44_974 (reverse)

seq1  CCCCCACCCCCCGACCCACCAAGACAGGGTTTCTCTGTGTAGCCTTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCCCACCCCCCGACCCACCAAGACAGGGTTTCTCTGTGTAGCTTTGGCT  50

seq1  GTCCTGGAACTCACTCTGTAGGCCAGGCTGGCCTCGGACTCAGAGACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAACTCACTCTGTAGGCCAGGCTGGCCTCGGACTCAGAGACCTG  100

seq1  TCTGCCTCTGTCTCCCAAGTGCTGGGATTAAAGGCATGCACCACAACTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCTGTCTCCCAAGTGCTGGGATTAAAGGCATGCACCACAACTGC  150

seq1  CTGGCTACGGTTGGATTTATTTGTTATGTAAAGGAAACTCAGAGAATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTACGGTTGGATTTATTTGTTATGTAAAGGAAACTCAGAGAATCTG  200

seq1  GGAAAGGAGAGGAATATATTTTGGTTTTCAAAATGGAGCTATTTTCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGAGAGGAATATATTTTGGTTTTCAAAATGGAGCTATTTTCTTTA  250

seq1  ACCCAGGTCTGAGCCATATGCAGATCTAATTCCAACTATTTGTTTAACGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTCTGAGCCATATGCAGATCTAATTCCAACTATTTGTTTAACGA  300

seq1  TTGGGTATTTTATGACCTTATTTTATTTTAATGACTGATTACTACCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTATTTTATGACCTTATTTTATTTTAATGACTGATTACTACCCCTA  350

seq1  GTGGGAAATTTGTTGAAGGCAAAGAGTTTTAAAACCAATTCCTAAGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAATTTGTTGAAGGCAAAGAGTTTTAAAACCAATTCCTAAGTGAG  400

seq1  CAATATCATTGCATTGAAAATAGAGCTAAACTAAAAGTAACACATGGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCATTGCATTGAAAATAGAGCTAAACTAAAAGTAACACATGGTAT  450

seq1  TAGTTCTTGTACTACACAGTGGGGTTGCCTCTGTATTTTTGGTCCACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTGTACTACACAGTGGGGTTGCCTCTGTATTTTTGGTCCACAGA  500

seq1  TCTGAGAAGGAGAAGAAATCCCTGGTGGGTTAAGAAAAAAAAATCACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAGGAGAAGAAATCCCTGGTGGGTTAAGAAAAAAAAATCACAAG  550

seq1  GAATTCTAATGCATCCAAAATCAAACATTATCTACGAGCTAAATATATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGCATCCAAAATCAAACATTATCTACGAGCTAAATATATAA  600

seq1  TATGATTTGTCCATGTGTATTTTCAAATGTAAGTGTAGGCTTGATTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTGTCCATGTGTATTTTCAAATGTAAGTGTAGGCTTGATTGACA  650

seq1  GACAATAATAAGCTTTTAAAAGCATTACAGGGCTGAGGTACAGCTAAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATAATAAGCTTTTAAAAGCATTACAGGGCTGAGGTACAGCTAAGCC  700

seq1  GTAGACTTGTAGTATGTGCAAAGTCCTGGGATTACCCTGAATAAATAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTTGTAGTATGTGCAAAGTCCTGGGATTACCCTGAATAAATAAGC  750

seq1  AAGTGAGCAAATCTTTGCACTAGTTACTTTAGAAATAATGGATGATGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGCAAATCTTTGCACTAGTTACTTTAGAAATAATGGATGATGTAT  800

seq1  TAAGTCCCAGTGATATAAAAGTTAACAAGATATCCCTAAGTCAGACGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCCCAGTGATATAAAAGTTAACAAGATATCCCTAAGTCAGACGGGC  850

seq1  ATACCGACAAACAGGTGATTATAATCTAGTGAGGTTAGTGTCAGCTGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGACAAACAGGTGATTATAATCTAGTGAGGTTAGTGTCAGCTGCAT  900

seq1  CATGTCTGCCTGTGTTACACATTCAGAATTC  931
      |||||||||||||||||||||||||||||||
seq2  CATGTCTGCCTGTGTTACACATTCAGAATTC  931

seq1: chr12_83890166_83890795
seq2: B6Ng01-104A18.g_565_1182

seq1  CCGGCCGTCTGGAGCTGAGGATGGCGCCGCCTCAGAAGCTCTGTGGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCGTCTGGAGCTGAGGATGGCGCCGCCTCAGAAGCTCTGTGGCTCT  50

seq1  TGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGAAGATGGCGCCTCCCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGAAGATGGCGCCTCCCAGAA  100

seq1  GCTCTGCGACTCTCGCCCGTCCCAGAAACGGCTGGCACTCTGTATTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCGACTCTCGCCCGTCCCAGAAACGGCTGGCACTCTGTATTCCAC  150

seq1  AAGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAAGAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAAGAAGGC  200

seq1  TCCCGCCGGCGCCTGTGCCACAAACCTCTCAGGCCGGGCAGACCCCCGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCCGGCGCCTGTGCCACAAACCTCTCAGGCCGGGCAGACCCCCGTG  250

seq1  CTCTCACCAGGAAGGTGGCCGGCTGTCTGGAGCTGAAGATGGCGCCGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACCAGGAAGGTGGCCGGCTGTCTGGAGCTGAAGATGGCGCCGCCC  300

seq1  AGAAGCTCTGCGACTCTCGCCCGTCCCAGAAACGGCTGGCACTCTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCTGCGACTCTCGCCCGTCCCAGAAACGGCTGGCACTCTGTATT  350

seq1  CCACACGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAAGA  400
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCACACGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCC-AGA  399

seq1  AGGCTCCCGCCGGCGCCTGTGCCACAAACCTCTCAGGCCAGGCAGACCCC  450
      | ||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  A-GCTCCCGCCGGCGCCTGTGCCACAAACCTCTCA-GCCAGGCAGA-CCC  446

seq1  CGTGCTCTCACCAGGAAGGTGGCCGGCTGTCTCCTGATAGACTCTTAAGA  500
      ||||||||||||||||| |||||||||||||| ||||||||||||  |||
seq2  CGTGCTCTCACCAGGAA-GTGGCCGGCTGTCT-CTGATAGACTCT--AGA  492

seq1  GTAAGGAGTAGGGCTTCTGGAGAGAAGGCTCAGGAGTTGATCTCTGAGGC  550
      |||||||||||||||||| || |||  |||||||||||||||||||||||
seq2  GTAAGGAGTAGGGCTTCT-GAAAGA--GCTCAGGAGTTGATCTCTGAGGC  539

seq1  TAGAATCTGGATTCTTGGCATCCAAGGGAAAGCTGTG-CATGGCAGCA-T  598
      ||| |||| || ||||||||||||| ||||||||||| || ||||||| |
seq2  TAG-ATCT-GAATCTTGGCATCCAA-GGAAAGCTGTGCCAAGGCAGCATT  586

seq1  ATG-CTTGTTGTCCTAAC-GATGGGGAAGGGAAG  630
      ||| |||||||| ||||| ||||||| |||||||
seq2  ATGCCTTGTTGT-CTAACGGATGGGG-AGGGAAG  618