BAC Information

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BAC

Clone NameB6Ng01-104H21
Chromosome12 (Build37)
Map Location 33,480,529 - 33,480,909
singlet/doubletsinglet
Overlap genenone
Upstream geneHbp1, Prkar2b, Pik3cg, 2010109K11Rik, LOC100043548
Downstream genePbef1, LOC100043553, 4933406C10Rik, Sypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb, LOC668801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104H21.bB6Ng01-104H21.g
ACCDH912777DH912778
length827375
definitionDH912777|Mus musculus domesticus DNA, BAC clone: B6Ng01-104H21, 5' end.DH912778|Mus musculus domesticus DNA, BAC clone: B6Ng01-104H21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctggtagaatttttggagtcatttatgtatactatcatatcat
ctgtaaataacaatactttggcttctttctttccagtttgtatccccctt
gatgtccttttcttgtcttattgctctagctaaaacctaaagaactatat
tgaatagataaggagagaaagtggacagccttgtcttgtccctgatttta
ctgaaattgctttaagtttccctcgatttaatttgatgttggctattggc
ttgctgggttttttttgtttttgtttttgtttttattttgtttgtttttg
ttttttgttttgttttgttttgcctttattatgtttaggtatgggccttt
aaccctgatctctccaggactttaatcatgaaaggatgttagattttgtc
aaagaccttgtcagcatccaataagatgctcatggttttctttctctcaa
tttgtttctatggtggatcacactaagagattgtcagatgccggaccacg
cctgcttcgctggggtgaagcctgctttgactgtgctgggtcatcttttt
catgtgctcttccattcagtttgcaagtcttttactgagtatttttgtat
caatgtttataggaaaacttgttggaaattatctttcaatgttgagtctt
tgtgtgatttgggtatcaaggtgactgtgactgtggactcataaaataca
tttagcaatattttgtgaaataattgaggagtattttttggtatttcctc
ctttttgaacgtctggtagaattctgtgctaagaccatcaggccctgagc
tttttttggggggtgggggtgggggta
agacttgatagttatggggcgatgaatgaaatgtttcccatgttgggtaa
tgctgttcttttctttcagtttctctttctacaaggtcccttttcttatc
aggagctttgagcatagcacgtagttcttttctgcttctcttcaacattt
catttctcagaaataagatccgaaccatttgtcattgcttcccctttcct
gtgcttacgctgcagtctagggtcatgactgtgtctggcttcctagagca
agctacccaccttctccttttgttctagtgctctttgtgttttcacacca
tcaaatgcatgtttatatgtttcttttcccctaactcatttggtctactc
tatggtcctttaattatttctgccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_33480529_33480909
seq2: B6Ng01-104H21.g_66_446 (reverse)

seq1  GGGCAGAAATAATTAAAGGACCATAGAGTAGACCAAATGAGTTAGGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAATAATTAAAGGACCATAGAGTAGACCAAATGAGTTAGGGGAA  50

seq1  AAGAAACATATAAACATGCATTTGATGGTGTGAAAACACAAAGAGCACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACATATAAACATGCATTTGATGGTGTGAAAACACAAAGAGCACTA  100

seq1  GAACAAAAGGAGAAGGTGGGTAGCTTGCTCTAGGAAGCCAGACACAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAAGGAGAAGGTGGGTAGCTTGCTCTAGGAAGCCAGACACAGTCA  150

seq1  TGACCCTAGACTGCAGCGTAAGCACAGGAAAGGGGAAGCAATGACAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTAGACTGCAGCGTAAGCACAGGAAAGGGGAAGCAATGACAAATG  200

seq1  GTTCGGATCTTATTTCTGAGAAATGAAATGTTGAAGAGAAGCAGAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGGATCTTATTTCTGAGAAATGAAATGTTGAAGAGAAGCAGAAAAGA  250

seq1  ACTACGTGCTATGCTCAAAGCTCCTGATAAGAAAAGGGACCTTGTAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACGTGCTATGCTCAAAGCTCCTGATAAGAAAAGGGACCTTGTAGAAA  300

seq1  GAGAAACTGAAAGAAAAGAACAGCATTACCCAACATGGGAAACATTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTGAAAGAAAAGAACAGCATTACCCAACATGGGAAACATTTCAT  350

seq1  TCATCGCCCCATAACTATCAAGTCTGAATTC  381
      |||||||||||||||||||||||||||||||
seq2  TCATCGCCCCATAACTATCAAGTCTGAATTC  381