BAC Information

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BAC

Clone NameB6Ng01-107B14
Chromosome12 (Build37)
Map Location 83,242,145 - 83,370,130
singlet/doubletdoublet
Overlap genenone
Upstream geneSmoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821, Map3k9, Pcnx
Downstream geneSipa1l1, LOC432675, EG666911, Rgs6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107B14.bB6Ng01-107B14.g
ACCDH914660DH914661
length1,230485
definitionDH914660|Mus musculus domesticus DNA, BAC clone: B6Ng01-107B14, 5' end.DH914661|Mus musculus domesticus DNA, BAC clone: B6Ng01-107B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,368,864 - 83,370,130)(83,242,145 - 83,242,635)
sequence
gaattctgctttgttgggtccttgagctacccaatacccttgccacaccg
tcagtgggcagtatggggagcgccagctctgagccgtggctagaggattc
tcgggaacccacagcggtcagcactgtacttacctgtaaagatgagtttc
accttaaagcctgacagacacagcatgggaaggaagagaagcttgctctg
gtagccaccctgttctcttcctgtcttgtttgtcttccaatacctgacat
aggaccttgggcatcttaacatgtggagcaccccactctcccctaaagca
ccttagaactgattgtcagaataatggagcatttgctatctgttcaaatt
cagtaattatggggaacactaagaagccacaattcagaagactgactgga
gaacacacattcccatatcacgcctgttggctcctctaacattaggggag
aaaacgcacatactagaaagccctggtgcctacgctggaactaaaacctg
agcgtagcatggagtaaaccctgtgacagagcaaatgactctcaagttaa
gcaggctaaataatggaatctatttgatttttccatttcaataaccactg
ccgctctagcagggtctcactgtgtagcccactaaaccaagggctgtgat
tacaagtgtgcagctctttacccacagtcatttcaacttcttaaaataca
agtttcttagctcctcccaggtcagctaagtagaacacaagggcaaaaat
aaggcatcactacctgatggcacatatgtacaccaagttttcagtcttgt
tcctaacttcctaccacttgcttcattataacagaaagcccacttacaga
agctcactcagtttgcaatagcaatactgttgtgttaaaggaaggcatgc
ctttaaaagttttcaacaaagcactagatacagattgtgaccttacatgg
accaaattgtcggagtgcttgaaatcctcacttacacagtgtgagcacct
tttccggactgagtatgtcaccacaagcctgcgatagttcagtagtcagc
agcaataaagccagaccatgagttccaaatgaacacgcagatgtctgtgg
ccaaatggatcagaagaaaccgaacatatcaggacaaaaaaagcttccag
aaccagataagtagcctgatgaaggattcctataaaccatgtcttattga
gcctgttacgagagacagaacccctcacac
ttgctcacagtaggaagtgcacatgtggggccaagcatcctggcagcatc
gtgaagtctcaggagtgcatttggacttttagggggtaggggggatgcga
atttatatccttcaccagattgttaaaggtatgtgccaacagaaatacca
ggaaccactgaagtcccttcctttttctctgagtttagctaacagctcta
gtcatgccccagagtcgagagaacttatataattttatggtaactatatg
ggcttcattagcgccaagtgcaaagaacagaaatgaaaaggaaagtcaga
catagagattctgctggcacctctctctctctttctctctctctctctct
ctctctctctctctcaccagtcagcacaatatgctcaggcttaaatttac
gtcactattttataacttaaaaaaaaacaaaacccacctcattttcttca
ataaaccaacactgccttggggtggggggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_83368864_83370130
seq2: B6Ng01-107B14.b_45_1274 (reverse)

seq1  GTGTGTGGGTGTCTGTCTTTCTGTAACAGTCATTAGATGACATAGTTTTT  50
      ||||| |||  ||||||| || ||||||| |   | | ||||| ||||  
seq2  GTGTGAGGGGTTCTGTCTCTC-GTAACAGGCTCAATAAGACATGGTTT--  47

seq1  AATAAGATATCTTTTTCATTCATGGCTACTAATCTTGTGTCTTGGGAAGC  100
       ||| || |||   |||| ||| ||||||| |||| || |||  ||||||
seq2  -ATAGGA-ATC--CTTCA-TCA-GGCTACTTATCTGGT-TCT--GGAAGC  88

seq1  CTATTTTTTTGTCCTGAATATGTTCTGTTTTCTTCTGATACCATTTTGGC  150
         ||||||||||||| |||||||| | ||||||||||| ||||||  | 
seq2  ---TTTTTTTGTCCTG-ATATGTTC-GGTTTCTTCTGAT-CCATTT--GG  130

seq1  CCACAGACATCCTGCCGTGTTTCATTTTGGAAACTTCATGGTCTGGGCTT  200
      |||||||||| ||| |||| |||| |||||||   ||||||||| |||||
seq2  CCACAGACAT-CTG-CGTG-TTCA-TTTGGAA--CTCATGGTCT-GGCTT  173

seq1  TATTGCTGCTGACTTAACCTGAACTTATCGCAGGCTTTGTGGTTGACATA  250
      ||||||||||||||    |||||| |||||||||| |||||| |||||||
seq2  TATTGCTGCTGACT---ACTGAAC-TATCGCAGGC-TTGTGG-TGACATA  217

seq1  CTCAGTCCCGGAAAAGGTGCTCACACCTTGTGTAAGTGAGGATTTCAAGC  300
      |||||| |||||||||||||||||||  ||||||||||||||||||||||
seq2  CTCAGT-CCGGAAAAGGTGCTCACAC--TGTGTAAGTGAGGATTTCAAGC  264

seq1  ACTCCGACAATTTGGTCCATGTAAGGTCACAATCTGTATCTAGTGCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGACAATTTGGTCCATGTAAGGTCACAATCTGTATCTAGTGCTTTG  314

seq1  TTGAAAACCTTTTTAAAGGCATGCCTTCC-TTAACACAACAGTATTGCTA  399
      ||||||||  ||||||||||||||||||| ||||||||||||||||||||
seq2  TTGAAAAC--TTTTAAAGGCATGCCTTCCTTTAACACAACAGTATTGCTA  362

seq1  TTGCAAACTGAGTGAGCTTCTGTAAGTGGGCTTTCTGTTATAATGAAGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAACTGAGTGAGCTTCTGTAAGTGGGCTTTCTGTTATAATGAAGCA  412

seq1  AGTGGTAGGAAGTTAGGAACAAGACTGAAAACTTGGTGTACATATGTGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTAGGAAGTTAGGAACAAGACTGAAAACTTGGTGTACATATGTGCC  462

seq1  ATCAGGTAGTGATGCCTTATTTTTGCCCTTGTGTTCTACTTAGCTGACCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTAGTGATGCCTTATTTTTGCCCTTGTGTTCTACTTAGCTGACCT  512

seq1  GGGAGGAGCTAAGAAACTTGTATTTTAAGAAGTTGAAATGACTGTGGGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGCTAAGAAACTTGTATTTTAAGAAGTTGAAATGACTGTGGGTA  562

seq1  AAGAGCTGCACACTTGTAATCACAGCCCTTGGTTTAGTGGGCTACACAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTGCACACTTGTAATCACAGCCCTTGGTTTAGTGGGCTACACAGT  612

seq1  GAGACCCTGCTAGAGCGGCAGTGGTTATTGAAATGGAAAAATCAAATAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCTGCTAGAGCGGCAGTGGTTATTGAAATGGAAAAATCAAATAGA  662

seq1  TTCCATTATTTAGCCTGCTTAACTTGAGAGTCATTTGCTCTGTCACAGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTATTTAGCCTGCTTAACTTGAGAGTCATTTGCTCTGTCACAGGG  712

seq1  TTTACTCCATGCTACGCTCAGGTTTTAGTTCCAGCGTAGGCACCAGGGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCCATGCTACGCTCAGGTTTTAGTTCCAGCGTAGGCACCAGGGCT  762

seq1  TTCTAGTATGTGCGTTTTCTCCCCTAATGTTAGAGGAGCCAACAGGCGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTATGTGCGTTTTCTCCCCTAATGTTAGAGGAGCCAACAGGCGTG  812

seq1  ATATGGGAATGTGTGTTCTCCAGTCAGTCTTCTGAATTGTGGCTTCTTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGAATGTGTGTTCTCCAGTCAGTCTTCTGAATTGTGGCTTCTTAG  862

seq1  TGTTCCCCATAATTACTGAATTTGAACAGATAGCAAATGCTCCATTATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCCATAATTACTGAATTTGAACAGATAGCAAATGCTCCATTATTC  912

seq1  TGACAATCAGTTCTAAGGTGCTTTAGGGGAGAGTGGGGTGCTCCACATGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATCAGTTCTAAGGTGCTTTAGGGGAGAGTGGGGTGCTCCACATGT  962

seq1  TAAGATGCCCAAGGTCCTATGTCAGGTATTGGAAGACAAACAAGACAGGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGCCCAAGGTCCTATGTCAGGTATTGGAAGACAAACAAGACAGGA  1012

seq1  AGAGAACAGGGTGGCTACCAGAGCAAGCTTCTCTTCCTTCCCATGCTGTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACAGGGTGGCTACCAGAGCAAGCTTCTCTTCCTTCCCATGCTGTG  1062

seq1  TCTGTCAGGCTTTAAGGTGAAACTCATCTTTACAGGTAAGTACAGTGCTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGGCTTTAAGGTGAAACTCATCTTTACAGGTAAGTACAGTGCTG  1112

seq1  ACCGCTGTGGGTTCCCGAGAATCCTCTAGCCACGGCTCAGAGCTGGCGCT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTGTGGGTTCCCGAGAATCCTCTAGCCACGGCTCAGAGCTGGCGCT  1162

seq1  CCCCATACTGCCCACTGACGGTGTGGCAAGGGTATTGGGTAGCTCAAGGA  1249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATACTGCCCACTGACGGTGTGGCAAGGGTATTGGGTAGCTCAAGGA  1212

seq1  CCCAACAAAGCAGAATTC  1267
      ||||||||||||||||||
seq2  CCCAACAAAGCAGAATTC  1230

seq1: chr12_83242145_83242635
seq2: B6Ng01-107B14.g_70_560

seq1  GAATTCTTGCTCACAGTAGGAAGTGCACATGTGGGGCCAAGCATCCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTCACAGTAGGAAGTGCACATGTGGGGCCAAGCATCCTGGC  50

seq1  AGCATCGTGAAGTCTCAGGAGTGCATTTGGACTTTTAGGGGGTAGGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCGTGAAGTCTCAGGAGTGCATTTGGACTTTTAGGGGGTAGGGGGG  100

seq1  ATGCGAATTTATATCCTTCACCAGATTGTTAAAGGTATGTGCCAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGAATTTATATCCTTCACCAGATTGTTAAAGGTATGTGCCAACAGAA  150

seq1  ATACCAGGAACCACTGAAGTCCCTTCCTTTTTCTCTGAGTTTAGCTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGAACCACTGAAGTCCCTTCCTTTTTCTCTGAGTTTAGCTAACA  200

seq1  GCTCTAGTCATGCCCCAGAGTCGAGAGAACTTATATAATTTTATGGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGTCATGCCCCAGAGTCGAGAGAACTTATATAATTTTATGGTAAC  250

seq1  TATATGGGCTTCATTAGCGCCAAGTGCAAAGAACAGAAATGAAAAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGGCTTCATTAGCGCCAAGTGCAAAGAACAGAAATGAAAAGGAAA  300

seq1  GTCAGACATAGAGATTCTGCTGGCACCTCTCTCTCTCTTTCTCTCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACATAGAGATTCTGCTGGCACCTCTCTCTCTCTTTCTCTCTCTCT  350

seq1  CTCTCTCTCTCTCTCTCTCTCACCAGTCAGCACAATATGCTCAGGCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCACCAGTCAGCACAATATGCTCAGGCTTAA  400

seq1  ATTTACGTCACTATTTTATAACTTAAAAAAAAACAAAACCCACCTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACGTCACTATTTTATAACTTAAAAAAAAACAAAACCCACCTCATTT  450

seq1  TCTTCAATAAACCAACACTGCCTTGGGGTGGGGGGTGGGGG  491
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATAAACCAACACTGCCTTGGGGTGGGGGGTGGGGG  491