BAC Information

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BAC

Clone NameB6Ng01-107I12
Chromosome12 (Build37)
Map Location 106,995,513 - 107,139,916
singlet/doubletdoublet
Overlap geneAk7, Papola
Upstream geneClmn, 4831426I19Rik, Snhg10, Glrx5, LOC100040301, Tcl1b2, Tcl1b1, Tcl1b5, Tcl1b3, Tcl1b4, Tcl1, LOC100040310, 2810011L19Rik, LOC100040339, EG668081, D430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik
Downstream geneVrk1, LOC100040386, LOC100040404, LOC100040420, 1700121N20Rik, LOC100041191, LOC100040451, LOC673604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107I12.bB6Ng01-107I12.g
ACCDH914975DH914976
length967945
definitionDH914975|Mus musculus domesticus DNA, BAC clone: B6Ng01-107I12, 5' end.DH914976|Mus musculus domesticus DNA, BAC clone: B6Ng01-107I12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,139,178 - 107,139,916)(106,995,513 - 106,996,459)
sequence
gaattctttgacatgcatacgtcgagtctgtttggagactcgagtacatt
ttatattgtttctttttcataaagaattaacgttggggtcagtgagatgg
gtcagagtgtaaaagcacctactataaagactgatgactgacatctgatc
cctgggacccacagtggaaagacagacctcactgtggatgcgtctaccct
gctgctgctactgccgctgccgccgccgccaccaccaccaccatcctcag
ctgactcgggaactccacttcctcagccttccactatggaagaccagggg
ctctcgaggaactcaccaggcctccaataccagataagaactgctggggc
atccagcctcgaggacagaacaaccactggttctcagcctctgatatgat
gacagccattgttggactatactatatcatggaagccaatctaataaacc
ccctcttgatatatattcagcctattacttctgttcctctagagagcccc
tactaatagacagaacagatctcaatataaggtcactggtgcaagtggct
cattctggaggcacctcctggaagcccaagagagggagtgggggaataga
gcaagcaaggaaggaatctaaaaatacatgtgctgtggactggggaccca
ggctgaattctgctgggccctctgataaacccatacatggtcagtccatg
gaattcttaggggacagggggcggagatggggggggctggaatgctgacc
caccattggctcggagatttccaagaccatgggatcagtctcaagacaga
gaagaggttgaaggggattgagatgaaaaactaccattgactagaaacag
ttggcccagtcacaaatgacccaaccagctgagaagggtcagcccactac
agcatctgatgcctatagacaggtattgccttcctggatcaaatgtatag
tacgcgaggcttgaacg
gaattcttactaccagtgacctgtgtgatacagaaagtagaagaaaggaa
aggtttttcctttgctttgctttgttgttttttacatattttgttcgttt
gttcattttgaggcagagtctcttgtagccaaggctggccccaaactggc
taagtagtgaagggtggtctcgaattcctggtcctcctggtcctcctgcc
cctcactcctgagtgctggtattgcaggtgtgtgccaccatatcctgtat
gtagtgctggggatcaaacctggagtcgagcgtgtgctgggcaaacactc
tatcaaatggactatcacctcattcattcatatatatatatatatatata
tatatatatatcctgcctgcctgtggtaccatacccagcttgagagatat
tttaatgagatcattttgttgtcatctataaaatgataacaagtggcccc
aaactattgatttcacatctcagactccctggtaagctgaaggtgcgatg
tgtggcctggaagagtctttggggcttgggagacacactagcttttaggc
ctcatcaagccatggacagacagggcgccttgaacgtgaccacagccggg
aaatggtagccggctgcagaggaggcgtgcacactgcaattgacctgcca
agccctctgtagagcagactcctccctctcaggctctcctagcagtttcc
aggaactctgggttggggctaaagaaagaacctctcaaagggcaaaggtc
agaaatgtgacctggaggagagggtgtgggggcggggcgagcacagtctg
actgcagcttcatttttacgactaattttattaattattatttaagttgc
taggagtagcaaaccccgggtgcacccagcaggtgctgagcctctaggct
ctgggctcagcccttttctgaacgtgtttaaagcagtttgatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_107139178_107139916
seq2: B6Ng01-107I12.b_271_1009 (reverse)

seq1  CGTTCAAGCCCTGCGTTCTCTACATTTGATCCAGGAAGGCATTGCCTGTC  50
      ||||||||||  |||| || ||||||||||||||||||||| | ||||||
seq2  CGTTCAAGCCTCGCGTACTATACATTTGATCCAGGAAGGCAATACCTGTC  50

seq1  TATAGGCATCAGATGCTGTAGTGGGCTGACCCTTTCTCAGCTGGTTGGGT  100
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATAGGCATCAGATGCTGTAGTGGGCTGACCC-TTCTCAGCTGGTTGGGT  99

seq1  CATTTGTGACTGGGCC-ACTGTTTCTAGTCATTGGTAGTTTTTCATCTCA  149
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  CATTTGTGACTGGGCCAACTGTTTCTAGTCAATGGTAGTTTTTCATCTCA  149

seq1  ATCCCCTTCAACCTCTTCTCTGTCTTGAGACTGATCCCATGGTCTTGGAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTCAACCTCTTCTCTGTCTTGAGACTGATCCCATGGTCTTGGAA  199

seq1  ATCTCCGAGCCAATGGTGGGTCAGCATTCCAGCCCCCCCCATCTCCGCCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCGAGCCAATGGTGGGTCAGCATTCCAGCCCCCCCCATCTCCGCCC  249

seq1  CCTGTCCCCTAAGAATTCCATGGACTGACCATGTATGGGTTTATCAGAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCCCTAAGAATTCCATGGACTGACCATGTATGGGTTTATCAGAGG  299

seq1  GCCCAGCAGAATTCAGCCTGGGTCCCCAGTCCACAGCACATGTATTTTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCAGAATTCAGCCTGGGTCCCCAGTCCACAGCACATGTATTTTTA  349

seq1  GATTCCTTCCTTGCTTGCTCTATTCCCCCACTCCCTCTCTTGGGCTTCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTCCTTGCTTGCTCTATTCCCCCACTCCCTCTCTTGGGCTTCCA  399

seq1  GGAGGTGCCTCCAGAATGAGCCACTTGCACCAGTGACCTTATATTGAGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGCCTCCAGAATGAGCCACTTGCACCAGTGACCTTATATTGAGAT  449

seq1  CTGTTCTGTCTATTAGTAGGGGCTCTCTAGAGGAACAGAAGTAATAGGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTGTCTATTAGTAGGGGCTCTCTAGAGGAACAGAAGTAATAGGCT  499

seq1  GAATATATATCAAGAGGGGGTTTATTAGATTGGCTTCCATGATATAGTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATATCAAGAGGGGGTTTATTAGATTGGCTTCCATGATATAGTAT  549

seq1  AGTCCAACAATGGCTGTCATCATATCAGAGGCTGAGAACCAGTGGTTGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAACAATGGCTGTCATCATATCAGAGGCTGAGAACCAGTGGTTGTT  599

seq1  CTGTCCTCGAGGCTGGATGCCCCAGCAGTTCTTATCTGGTATTGGAGGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCGAGGCTGGATGCCCCAGCAGTTCTTATCTGGTATTGGAGGCC  649

seq1  TGGTGAGTTCCTCGAGAGCCCCTGGTCTTCCATAGTGGAAGGCTGAGGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGTTCCTCGAGAGCCCCTGGTCTTCCATAGTGGAAGGCTGAGGAA  699

seq1  GTGGAGTTCCCGAGTCAGCTGAGGATGGTGGTGGTGGTGG  739
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTCCCGAGTCAGCTGAGGATGGTGGTGGTGGTGG  739

seq1: chr12_106995513_106996459
seq2: B6Ng01-107I12.g_67_1011

seq1  GAATTCTTACTACCAGTGACCTGTGTGATACAGAAAGTAGAAGAAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTACCAGTGACCTGTGTGATACAGAAAGTAGAAGAAAGGAA  50

seq1  AGGTTTTTCCTTTGCTTTGCTTTGTTGTTTTTTACATATTTTGTTCGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTTCCTTTGCTTTGCTTTGTTGTTTTTTACATATTTTGTTCGTTT  100

seq1  GTTCATTTTGAGGCAGAGTCTCTTGTAGCCAAGGCTGGCCCCAAACTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTTGAGGCAGAGTCTCTTGTAGCCAAGGCTGGCCCCAAACTGGC  150

seq1  TAAGTAGTGAAGGGTGGTCTCGAATTCCTGGTCCTCCTGGTCCTCCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGTGAAGGGTGGTCTCGAATTCCTGGTCCTCCTGGTCCTCCTGCC  200

seq1  CCTCACTCCTGAGTGCTGGTATTGCAGGTGTGTGCCACCATATCCTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCCTGAGTGCTGGTATTGCAGGTGTGTGCCACCATATCCTGTAT  250

seq1  GTAGTGCTGGGGATCAAACCTGGAGTCGAGCGTGTGCTGGGCAAACACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCTGGGGATCAAACCTGGAGTCGAGCGTGTGCTGGGCAAACACTC  300

seq1  TATCAAATGGACTATCACCTCATTCATTCATATATATATATATATATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATGGACTATCACCTCATTCATTCATATATATATATATATATATA  350

seq1  TATATATATATCCTGCCTGCCTGTGGTACCATACCCAGCTTGAGAGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATCCTGCCTGCCTGTGGTACCATACCCAGCTTGAGAGATAT  400

seq1  TTTAATGAGATCATTTTGTTGTCATCTATAAAATGATAACAAGTGGCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGAGATCATTTTGTTGTCATCTATAAAATGATAACAAGTGGCCCC  450

seq1  AAACTATTGATTTCACATCTCAGACTCCCTGGTAAGCTGAAGGTGCGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTGATTTCACATCTCAGACTCCCTGGTAAGCTGAAGGTGCGATG  500

seq1  TGTGGCCTGGAAGAGTCTTTGGGGCTTGGGAGACACACTAGCTTTTAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCTGGAAGAGTCTTTGGGGCTTGGGAGACACACTAGCTTTTAGGC  550

seq1  CTCATCAAGCCATGGACAGACAGGGCGCCTTGAACGTGACCACAGCCGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCAAGCCATGGACAGACAGGGCGCCTTGAACGTGACCACAGCCGGG  600

seq1  AAATGGTAGCCGGCTGCAGAGGAGGCGTGCACACTGCAATTGACCTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTAGCCGGCTGCAGAGGAGGCGTGCACACTGCAATTGACCTGCCA  650

seq1  AGCCCTCTGTAGAGCAGACTCCTCCCTCTCAGGCTCTCCTAGCAGTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTGTAGAGCAGACTCCTCCCTCTCAGGCTCTCCTAGCAGTTTCC  700

seq1  AGGAACTCTGGGTTGGGGCTAAAGAAAGAACCTCTCAAAGGGCAAAGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTCTGGGTTGGGGCTAAAGAAAGAACCTCTCAAAGGGCAAAGGTC  750

seq1  AGAAATGTGACCTGGAGGAGAGGGTGTGGGGGCGGGGCGAGCACAGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTGACCTGGAGGAGAGGGTGTGGGGGCGGGGCGAGCACAGTCTG  800

seq1  ACTGCAGCTTCATTTTTAAGGACTAATTTTATTAATTATTATTTAAGGTG  850
      ||||||||||||||||| | ||||||||||||||||||||||||||| ||
seq2  ACTGCAGCTTCATTTTT-ACGACTAATTTTATTAATTATTATTTAAGTTG  849

seq1  CTAGGAGTAGCAAACCCAGGGTGCACCCAGCAGGTGCTGAGCCTCTAGGC  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTAGGAGTAGCAAACCCCGGGTGCACCCAGCAGGTGCTGAGCCTCTAGGC  899

seq1  TCTGGCCTCAGCCCTTTTCTGAACGTGTTTAAAGTCAGTTTGAGTTT  947
      ||||| |||||||||||||||||||||||||||| |||||||| |||
seq2  TCTGGGCTCAGCCCTTTTCTGAACGTGTTTAAAG-CAGTTTGATTTT  945