BAC Information

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BAC

Clone NameB6Ng01-108A21
Chromosome12 (Build37)
Map Location 23,814,233 - 23,815,242
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668662, LOC668664, 2410018L13Rik, LOC77114, EG668669, EG668670, LOC668680, LOC100042895, LOC100043435
Downstream geneEG628081, LOC100042903, LOC100043440, EG668518, LOC100043445, LOC668697, LOC100042923, LOC677338, EG668701, LOC668471, LOC668703, LOC546534, 9030624G23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108A21.bB6Ng01-108A21.g
ACCDH915340DH915341
length1,009736
definitionDH915340|Mus musculus domesticus DNA, BAC clone: B6Ng01-108A21, 5' end.DH915341|Mus musculus domesticus DNA, BAC clone: B6Ng01-108A21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgacatccattgatatatagtttgtggtgagttgttgggtgagt
tgcaacaccctgtaggggttccagcttgctcacctgtaaaacaagatgga
ttctcttagctctttgatagggggtgtgctggttagtggttttgtcagct
taacatgagttagagtcatctaagaagcaagaacttgaattgagaaaatg
cctctatcagatggcctgtaggcaagtttttgagacattgtattgattaa
tggttgatgtgtgggaaggcccagccactgtgattagtgggcctggctta
tataaaaaatgctatctgaggagatggagagatggctcagtgattaacac
tggctgctcctctagaggacctggtttcaactcccagaatccacatggtg
cctcacgaccatttgtttttccagtttcaggggatctggagccctatagt
ggctgctttgaacatagcatgtacatcttatgcagataagcaataagtaa
atacatacatacatacatacatacatacatacatacgctaaaaataaata
agtctcaaaagaaaaaaaaaaagcaagccgagcacattgtgaggagcaag
tcataagcagccctcctccatggtctctgcttcagttcctgcctcttggt
ccctgccctgcttgagtttctgccttcttttccttcataatagactgtga
gctgccaaatgaaatgaaatcattcctccccaagttgattctgatcatag
tgtttaaagcagcaataggaagcaaagtagttcagtgagttagatgttgc
ttttattggcatttggggaccatgaacagctgtgtttcagttatactggg
agggaggttatcctccatagatccacacatgactgtgtgggtgtcaagga
gatcagccataactcgaggaggtggggagcagatgacagagatggtttat
ctttatcatgaatcaactgaaattgtcttgcattggcaggctttactccc
ggcatcctc

gaattcctcctttaaaaaaaaaaaaaacaaggaaacattgccttaagaga
tacctttattcaatttgtacctctattagacctatactgatctgacaatg
tgtatagacttacaagatattgcacatcgaatagtgataaatatatatag
tatataatataatataaatattatataatataatataaatattatataat
ataatataaatataatataatataaatatagtataaatataatagtgata
aatatatatccaaaaccttccaataagcaaataatccattggaaagttgg
tgatactcatattcttatactgaaattgatcatttgtttagggtacagtt
tatgagagtcaagagtgttgtcataggagaaaccttaattcatgtattac
acgtctatgaggaacaaaaggtcaaacagtgtgaatgcaatgtggaaacc
tttcatctgttattcttctttttatatgtatgtcatgtgtcacaatggat
aaaagccatgtgaacataggtatattgaaaggaacaatgttctgctttct
atcccagaataatgagaaaatatgtcagattctgtctttggtagacaatc
tgaatatgataaaagtttgcagtgaattggttttctaatttttactggaa
acttcccccaagctcacactgaagaaaatctttatgggtactagaaattt
ggaaaattcttttgtttcttctggttcacagcaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_23814233_23815242
seq2: B6Ng01-108A21.b_45_1053

seq1  GAATTCTGACATCCATTGATATATAGTTTGTGGTGAGTTGTTGGGTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACATCCATTGATATATAGTTTGTGGTGAGTTGTTGGGTGAGT  50

seq1  TGCAACACCCTGTAGGGGTTCCAGCTTGCTCACCTGTAAAACAAGATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACACCCTGTAGGGGTTCCAGCTTGCTCACCTGTAAAACAAGATGGA  100

seq1  TTCTCTTAGCTCTTTGATAGGGGGTGTGCTGGTTAGTGGTTTTGTCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTAGCTCTTTGATAGGGGGTGTGCTGGTTAGTGGTTTTGTCAGCT  150

seq1  TAACATGAGTTAGAGTCATCTAAGAAGCAAGAACTTGAATTGAGAAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGAGTTAGAGTCATCTAAGAAGCAAGAACTTGAATTGAGAAAATG  200

seq1  CCTCTATCAGATGGCCTGTAGGCAAGTTTTTGAGACATTGTATTGATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATCAGATGGCCTGTAGGCAAGTTTTTGAGACATTGTATTGATTAA  250

seq1  TGGTTGATGTGTGGGAAGGCCCAGCCACTGTGATTAGTGGGCCTGGCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGATGTGTGGGAAGGCCCAGCCACTGTGATTAGTGGGCCTGGCTTA  300

seq1  TATAAAAAATGCTATCTGAGGAGATGGAGAGATGGCTCAGTGATTAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAATGCTATCTGAGGAGATGGAGAGATGGCTCAGTGATTAACAC  350

seq1  TGGCTGCTCCTCTAGAGGACCTGGTTTCAACTCCCAGAATCCACATGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTCCTCTAGAGGACCTGGTTTCAACTCCCAGAATCCACATGGTG  400

seq1  CCTCACGACCATTTGTTTTTCCAGTTTCAGGGGATCTGGAGCCCTATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACGACCATTTGTTTTTCCAGTTTCAGGGGATCTGGAGCCCTATAGT  450

seq1  GGCTGCTTTGAACATAGCATGTACATCTTATGCAGATAAGCAATAAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTTTGAACATAGCATGTACATCTTATGCAGATAAGCAATAAGTAA  500

seq1  ATACATACATACATACATACATACATACATACATACGCTAAAAATAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATACATACATACATACATACATACATACGCTAAAAATAAATA  550

seq1  AGTCTCAAAAGAAAAAAAAAAAGCAAGCCGAGCACATTGTGAGGAGCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAAAAGAAAAAAAAAAAGCAAGCCGAGCACATTGTGAGGAGCAAG  600

seq1  TCATAAGCAGCCCTCCTCCATGGTCTCTGCTTCAGTTCCTGCCTCTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGCAGCCCTCCTCCATGGTCTCTGCTTCAGTTCCTGCCTCTTGGT  650

seq1  CCCTGCCCTGCTTGAGTTTCTGCCTTCTTTTCCTTCATAATAGACTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCTGCTTGAGTTTCTGCCTTCTTTTCCTTCATAATAGACTGTGA  700

seq1  GCTGCCAAATGAAATGAAATCATTCCTCCCCAAGTTGATTCTGATCATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAAATGAAATGAAATCATTCCTCCCCAAGTTGATTCTGATCATAG  750

seq1  TGTTTAAAGCAGCAATAGGAAGCAAAGTAGTTCAGTGAGTTAGATGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAGCAGCAATAGGAAGCAAAGTAGTTCAGTGAGTTAGATGTTGC  800

seq1  TTTTATTGGCATTTGGGGACCATGAACAGCTGTG-TTCAGTTAATACT-G  848
      |||||||||||||||||||||||||||||||||| ||||||| ||||| |
seq2  TTTTATTGGCATTTGGGGACCATGAACAGCTGTGTTTCAGTT-ATACTGG  849

seq1  GAGGGAGGTTATCCTCCATAGATCCACACATGACTGTGTGGGTGTCAGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAGGGAGGTTATCCTCCATAGATCCACACATGACTGTGTGGGTGTCAAGG  899

seq1  AGATCAGCAATAACTCGAGGAGGTGGGGAGCAGATGAACAGAGATGGTTT  948
      |||||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  AGATCAGCCATAACTCGAGGAGGTGGGGAGCAGATG-ACAGAGATGGTTT  948

seq1  AACTTTATCATGAATCAACTGAAAAATGTCTTGCATTGGCAGGGCTTTAC  998
      | ||||||||||||||||||| ||| ||||||||||||||| ||||||||
seq2  ATCTTTATCATGAATCAACTG-AAATTGTCTTGCATTGGCA-GGCTTTAC  996

seq1  TCCCGGCA-CCTC  1010
      |||||||| ||||
seq2  TCCCGGCATCCTC  1009


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