BAC Information

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BAC

Clone NameB6Ng01-109O12
Chromosome12 (Build37)
Map Location 30,355,621 - 30,356,680
singlet/doubletsinglet
Overlap geneMyt1l
Upstream geneAdi1, Ttc15, Tssc1, 4833405L11Rik, LOC629608, LOC100043496
Downstream genePxdn, Tpo, Sntg2, Tmem18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109O12.bB6Ng01-109O12.g
ACCDH916683DH916684
length1,2301,058
definitionDH916683|Mus musculus domesticus DNA, BAC clone: B6Ng01-109O12, 5' end.DH916684|Mus musculus domesticus DNA, BAC clone: B6Ng01-109O12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaatatcactttttgcagatgatatgaaagtatatataagtga
ccctaaaaattccaccagagaactcctaaacctgataaacagcttcaatg
aagtagctggatatgaaattaactcaaacaagtcaatggcctttctctac
acaaaggataaacaggctgagaaagaaataaggaaacaacacccttctca
atagtcacaaataatataaaataccttggcatgactctaactaaggaagt
gaaaaatctgtatgataagaacttcaagtctctgaggaaagaaattaaag
aagatctcaaaagatggaaagatctcccatactcatgaattggcaggatc
ggtatagtaaaaatggctatcttgccaaaagcaatctacaaattcaatgc
aatctccatcaaaattccaactcaattcttcaacgaattggaaagggcaa
tctgcaaattcattggattaaaaaaaaaccaaggatagcaaaaactcttc
tcaaggataaaagaccctctggtggaatcaccatgcttgacctaaagctt
tactacagagcaattgtgataaaaactacatggtactggtatagcaacag
actagtagaccaatggaacagaattgaagacacagaaatgaacccacaca
cctatggtcacttgatctttgacaagggagctaaatccattcagtggaaa
aaagacagcattttcaacaattggtgctggcacaactggcagttatcatg
cagaagaatgcgaattgatccattcctattgccttgtactaaggtcaaat
ctaagtggattaaggaacttcacataaaaccagagacactgaaacttata
gaggagaaagtagggagaagccttgaagatatgggcacaggggaaaaatt
cctgaatagaacagcaatggcttgtgctgtaagatcgagaaatgacaaat
ggaaactcatatattgcaaagcttctgcaaggcaaagacactgtcataag
acaaaaggcactaacagattgagaaaggatctttactatctagatcagat
agggactaatatccatacatattaagacctcagaaggtggactcggaaat
caaataatccattaaaaatggtctcagacaaattatataaaaactaggcg
tgaactctacctagagagtgagatctgttggacgactcatctctctgaga
ggatttagaagtctgaaaatgggaagaact
gaattcacagctatcttgtagtctgcaggctggatatgtctgactacatg
ttaacctaataagccaagaagactgaaagagatgaggtacaaacatagct
tgaatagggccggagagagacaatagcttgcatgagggaggttccctaat
gtggctaaagagcaagtgggacagagaacacagaaagagatgctcatctt
tccattctgctggctaatggcatcattttgcagaacaaaatgagctattc
tctggggctcaggaattagctcaatgcagggcacttgctaaggctctagg
cccttccctgatactctacagaaagtcattttcttgattaaagtcactta
tagtctcaggaaagaaacatatttgaatgtccccaggttgctgatttatt
tttgctttgggtattctattattttaaatcttataaattttatttaaaaa
aaaaagcccttgcaaataaataacagcatcatataccaaaattaaccaga
cccaaagtctatacaactcaatgagtttccatacagttagaataggcatt
tgaaatagaatgccttggagcttcacattaaaatttacactttaagtttt
tactatttttacgtatttatctacccacaaacccaccaaatccccggcaa
attagaactagggaaacaattgtctttaaatccgttcatgactcctttct
cttacctgagctctgtcctttctcatcttttcacttttaccctttcttgt
tctcttttcttcatgttatactataatacccatgggcatttttgcatata
tacaattttaaagataattattattattttaaaatgtgtgtgtgagtgtg
agtgtgtgggtatttgcgcatgagtgaagggactgcggatccagatgagg
gagctgtatctctttggagttataggtgatgacgactgttgtgttggtac
tggaaccggccttcttctctgtatgaccagtatatgctcttaacactgga
gcccccttctgtcttgtttttaagggtagcattcagattcatgatctaag
ctcagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_30355621_30356680
seq2: B6Ng01-109O12.g_71_1128 (reverse)

seq1  TGACTGAGCTTAGATCCATG-ATCTGAAATGCTACCCTTAAAAACAGGAC  49
      ||||||||||||||| |||| ||||| ||||||||||||||||||| |||
seq2  TGACTGAGCTTAGAT-CATGAATCTG-AATGCTACCCTTAAAAACAAGAC  48

seq1  AGAA-GGGGCT-CAGTGTTTAAGAGCATATACTGGTCCTACAGAGAAGAA  97
      |||| |||||| ||||| ||||||||||||||||||| ||||||||||||
seq2  AGAAGGGGGCTCCAGTG-TTAAGAGCATATACTGGTCATACAGAGAAGAA  97

seq1  GGCCGGTTCCCAGTACC-ACACAACAGTTCGTCATCACCTATAACTCCAA  146
      |||||||| |||||||| ||||||||| ||||||||||||||||||||||
seq2  GGCCGGTT-CCAGTACCAACACAACAG-TCGTCATCACCTATAACTCCAA  145

seq1  AGAGATACAGCTCCCTCATCTGGACTCCGCAGGCACCTCACTCATGTGCA  196
      |||||||||||||||||||||||| ||||||| | | ||||||||| |||
seq2  AGAGATACAGCTCCCTCATCTGGA-TCCGCAGTCCCTTCACTCATGCGCA  194

seq1  AATACCCACACACTCACACTCACACACACATTTTAAAATAATAATAATTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCACACACTCACACTCACACACACATTTTAAAATAATAATAATTA  244

seq1  TCTTTAAAATTGTATATATGCAAAAATGCCCATGGGTATTATAGTATAAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAATTGTATATATGCAAAAATGCCCATGGGTATTATAGTATAAC  294

seq1  ATGAAGAAAAGAGAACAAGAAAGGGTAAAAGTGAAAAGATGAGAAAGGAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAAAGAGAACAAGAAAGGGTAAAAGTGAAAAGATGAGAAAGGAC  344

seq1  AGAGCTCAGGTAAGAGAAAGGAGTCATGAACGGATTTAAAGACAATTGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCAGGTAAGAGAAAGGAGTCATGAACGGATTTAAAGACAATTGTT  394

seq1  TCCCTAGTTCTAATTTGCCGGGGATTTGGTGGGTTTGTGGGTAGATAAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGTTCTAATTTGCCGGGGATTTGGTGGGTTTGTGGGTAGATAAAT  444

seq1  ACGTAAAAATAGTAAAAACTTAAAGTGTAAATTTTAATGTGAAGCTCCAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAAAATAGTAAAAACTTAAAGTGTAAATTTTAATGTGAAGCTCCAA  494

seq1  GGCATTCTATTTCAAATGCCTATTCTAACTGTATGGAAACTCATTGAGTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCTATTTCAAATGCCTATTCTAACTGTATGGAAACTCATTGAGTT  544

seq1  GTATAGACTTTGGGTCTGGTTAATTTTGGTATATGATGCTGTTATTTATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGACTTTGGGTCTGGTTAATTTTGGTATATGATGCTGTTATTTATT  594

seq1  TGCAAGGGCTTTTTTTTTTAAATAAAATTTATAAGATTTAAAATAATAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGGCTTTTTTTTTTAAATAAAATTTATAAGATTTAAAATAATAGA  644

seq1  ATACCCAAAGCAAAAATAAATCAGCAACCTGGGGACATTCAAATATGTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAAAGCAAAAATAAATCAGCAACCTGGGGACATTCAAATATGTTT  694

seq1  CTTTCCTGAGACTATAAGTGACTTTAATCAAGAAAATGACTTTCTGTAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGAGACTATAAGTGACTTTAATCAAGAAAATGACTTTCTGTAGA  744

seq1  GTATCAGGGAAGGGCCTAGAGCCTTAGCAAGTGCCCTGCATTGAGCTAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGGGAAGGGCCTAGAGCCTTAGCAAGTGCCCTGCATTGAGCTAAT  794

seq1  TCCTGAGCCCCAGAGAATAGCTCATTTTGTTCTGCAAAATGATGCCATTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCCCCAGAGAATAGCTCATTTTGTTCTGCAAAATGATGCCATTA  844

seq1  GCCAGCAGAATGGAAAGATGAGCATCTCTTTCTGTGTTCTCTGTCCCACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGAATGGAAAGATGAGCATCTCTTTCTGTGTTCTCTGTCCCACT  894

seq1  TGCTCTTTAGCCACATTAGGGAACCTCCCTCATGCAAGCTATTGTCTCTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTAGCCACATTAGGGAACCTCCCTCATGCAAGCTATTGTCTCTC  944

seq1  TCCGGCCCTATTCAAGCTATGTTTGTACCTCATCTCTTTCAGTCTTCTTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGCCCTATTCAAGCTATGTTTGTACCTCATCTCTTTCAGTCTTCTTG  994

seq1  GCTTATTAGGTTAACATGTAGTCAGACATATCCAGCCTGCAGACTACAAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTAGGTTAACATGTAGTCAGACATATCCAGCCTGCAGACTACAAG  1044

seq1  ATAGCTGTGAATTC  1060
      ||||||||||||||
seq2  ATAGCTGTGAATTC  1058