BAC Information

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BAC

Clone NameB6Ng01-111K06
Chromosome12 (Build37)
Map Location 119,668,151 - 119,668,951
singlet/doubletsinglet
Overlap genenone
Upstream geneRapgef5, A930023M06Rik, Cdca7l, Dnahc11, Sp4
Downstream geneLOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111K06.bB6Ng01-111K06.g
ACCDH917930DH917931
length814803
definitionDH917930|Mus musculus domesticus DNA, BAC clone: B6Ng01-111K06, 5' end.DH917931|Mus musculus domesticus DNA, BAC clone: B6Ng01-111K06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttatggagtctaccttcttgagttctttatatatattggatattagtccc
ctgtccgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatcaattctcaatcttacagcacaagccattgatgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctccactttgccccttccatgggaaacaaaacacccatggaaggagt
tacagagacaaaatttggaagtgtgacgaaaggatggaccatctagtgat
tgccatatccagagatccatcccatgatcagcttccaaacgctgacacca
ttgcatacactagcaagattttgctgaaaggacccagatatagctgtctc
ttgtgaaactatgccagggcctagcaaacacagaagtggatgctcacagt
cagctattgaatggaccacagggcccccaatggaggaactagagaaagca
cccaaggaactaaagggaactgcaaccctataggtggaacaacaatatga
actaagcagtaccccggagctcttgtctctagctgcatatgtatcaaaag
atggcctagtcggccatcactgcaaagagaggcccattggacttgcaaac
tttatatgccccagtacaggggaacgccagggccaaaaagggggagtggg
tgggtaaggggagt
gaattcactgtaaacgtggggttgttctcacccatgcttctgacccaaga
atgtttatatcatgcatcccccatatcctctgccctgtgtcaggctggag
ccatgtcttcatagccaggaaagggaaaacagcaagaggcaagaggacca
aaagagttgtattcctgggagcagcctcaaggtcagctgtttccaactga
tccctggtactcaaccatctaaggtaggaacaggaagttgggaactcagc
cagaggaagcatgggagcatctcctactaactgcctcaacttccccagtc
aaatttctctaggctcccagttagatcatgtttattgtttgtccctttac
ttagaaatgttgcctgactaccgggatgtgggaagggaggccgttgagag
gatggggaggagggcacaaggacaggctggctgttccaccaggcctctca
gcccagaactccagctgactgcctcaatggggcctcccctgttgatctct
gttggatgtttgtcagtttgtttgcttgcttgcttttgttattgggctgc
tccagttgtctctgctgcatgttccagtgcctgatttgatgacagtttgc
tatctatcagctgtttctctctatcggctactcaatatttacgctttcat
ttttttgcttgctaaatacataatgaatttcactcattcagagcacagct
aactatagattattctctgaagtatatagaacaacacccaacacctcttt
cctagcctcctcatgtgcatgcatagcccacagagagagtggggagggag
gga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_119668151_119668951
seq2: B6Ng01-111K06.g_69_871 (reverse)

seq1  TCCCTCCCTCCCCACTCTCTCTGTGGGCTATGCATGCACATGAGGAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCCACTCTCTCTGTGGGCTATGCATGCACATGAGGAGGCT  50

seq1  AGG-AAGAGGTGTTGGGTGTTGTTCTATATACTTCAGAGAATAATCTATA  99
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAGGTGTTGGGTGTTGTTCTATATACTTCAGAGAATAATCTATA  100

seq1  GTTAGCTGTGCTCTGAATGAGTG-AATTCATTATGTATTTAGCAAGCAAA  148
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTAGCTGTGCTCTGAATGAGTGAAATTCATTATGTATTTAGCAAGCAAA  150

seq1  AAAATGAAAGCGTAAATATTGAGTAGCCGATAGAGAGAAACAGCTGATAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAAGCGTAAATATTGAGTAGCCGATAGAGAGAAACAGCTGATAG  200

seq1  ATAGCAAACTGTCATCAAATCAGGCACTGGAACATGCAGCAGAGACAACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAACTGTCATCAAATCAGGCACTGGAACATGCAGCAGAGACAACT  250

seq1  GGAGCAGCCCAATAACAAAAGCAAGCAAGCAAACAAACTGACAAACATCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGCCCAATAACAAAAGCAAGCAAGCAAACAAACTGACAAACATCC  300

seq1  AACAGAGATCAACAGGGGAGGCCCCATTGAGGCAGTCAGCTGGAGTTCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGATCAACAGGGGAGGCCCCATTGAGGCAGTCAGCTGGAGTTCTG  350

seq1  GGCTGAGAGGCCTGGTGGAACAGCCAGCCTGTCCTTGTGCCCTCCTCCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGAGGCCTGGTGGAACAGCCAGCCTGTCCTTGTGCCCTCCTCCCC  400

seq1  ATCCTCTCAACGGCCTCCCTTCCCACATCCCGGTAGTCAGGCAACATTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTCAACGGCCTCCCTTCCCACATCCCGGTAGTCAGGCAACATTTC  450

seq1  TAAGTAAAGGGACAAACAATAAACATGATCTAACTGGGAGCCTAGAGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAAGGGACAAACAATAAACATGATCTAACTGGGAGCCTAGAGAAA  500

seq1  TTTGACTGGGGAAGTTGAGGCAGTTAGTAGGAGATGCTCCCATGCTTCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTGGGGAAGTTGAGGCAGTTAGTAGGAGATGCTCCCATGCTTCCT  550

seq1  CTGGCTGAGTTCCCAACTTCCTGTTCCTACCTTAGATGGTTGAGTACCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGAGTTCCCAACTTCCTGTTCCTACCTTAGATGGTTGAGTACCAG  600

seq1  GGATCAGTTGGAAACAGCTGACCTTGAGGCTGCTCCCAGGAATACAACTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGTTGGAAACAGCTGACCTTGAGGCTGCTCCCAGGAATACAACTC  650

seq1  TTTTGGTCCTCTTGCCTCTTGCTGTTTTCCCTTTCCTGGCTATGAAGACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTCCTCTTGCCTCTTGCTGTTTTCCCTTTCCTGGCTATGAAGACA  700

seq1  TGGCTCCAGCCTGACACAGGGCAGAGGATATGGGGGATGCATGATATAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCAGCCTGACACAGGGCAGAGGATATGGGGGATGCATGATATAAA  750

seq1  CATTCTTGGGTCAGAAGCATGGGTGAGAACAACCCCACGTTTACAGTGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTGGGTCAGAAGCATGGGTGAGAACAACCCCACGTTTACAGTGAA  800

seq1  TTC  801
      |||
seq2  TTC  803