BAC Information

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BAC

Clone NameB6Ng01-113B10
Chromosome12 (Build37)
Map Location 95,819,485 - 95,993,433
singlet/doubletdoublet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603, LOC667688, Flrt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113B10.bB6Ng01-113B10.g
ACCDH918974DH918975
length1,1901,139
definitionDH918974|Mus musculus domesticus DNA, BAC clone: B6Ng01-113B10, 5' end.DH918975|Mus musculus domesticus DNA, BAC clone: B6Ng01-113B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,819,485 - 95,820,673)(95,992,285 - 95,993,433)
sequence
gaattcacttctcgctgtccatggatatacctgattgccaacactaggta
gtggaatgtgatggttaaaataacaattgtcccatatgttcataaatttg
gatagttggtcaccagttgttaaaaaagttttggaaaaattaaggataga
aggccttgttggaggagatgtgtcacaggtctcctatcctatgatcactc
aggtttcaaaatacatgtatgatgcacagtgttcttcctttgccctgtga
ctgtgcacgaaaatatgagctcttgctgttccttcattcagccatcatgg
actctagcactctgaaatcataaaccaaatcaaatattctatcttattaa
agaagtgaacaaagtatagtattctgataggcaaagtgagatgctattaa
ttgtagtttttctttctatgatgagtaatgtactaagagatatgtatctg
aaaaggaaagcctacataggtcattttctctgagaaatattaaaaccttg
cttgtattccattttcagactttctaattcagattataagctgtatttgt
atgttttctttcgaagaaaattcaaatttactaaaacaaaaataaactat
ataatacagagaaaaatatatacctcttttgggttttgttggaaaaacag
tatcaagtttataacactcagtttgaaggccatttcaagactatttttgt
tgtaatgttttagatcataatgaaatcagttcaacattaacacagtgaga
cttaagatggggctgtgtaaaggtgtctctttttatataatttactggtc
agtagaagaccctagactgtgattactgagaaaggtactatattgagcat
gtctaaattatcagtaaatatgacactattcaaaggcccacactaatgag
aagaaagatggcaggtttgatagacttaaggaaaataaaacagaaaatgt
aaaaatccaacatggaaaatgcttacatatatatgagaaacatgacattg
cagctagcaatgtaattattttgtgaaggagagggtgcttttcttgtggt
ttgaattcctctactttcaaaaaagtcttaaattgtcatggactagacag
ctatttaagaacatagttttattggattaaatctaataaatggctggaaa
ggtctcacaaaaatgtttccggaacctggtaaaagatctc
gaattcacttcactgggtaaaatccatagccatagttgatcaagttgtca
gacttttaggaatctaaacatgacactgaaaatacttcatattatattga
gcatttatataagtaattgcatgaccaaaataagaaccccccagaataaa
ccacactaaattaaatactaaaaaatattattataaattttgatgtaaat
catccagaagggataattaacttgtatatagtacaaatataaccaaagtg
ctttatttaattttgttcattattctgcttaattaaaaaatagaacatta
taggtatgtcattatatgaactaataaaaaatagaaaaaacatctattga
gaactagtataaaatagaaaaaaaatttattgagtaccttgtccatagtc
aatatttacaattgagtaagactttgttataaaatctgaaccagaataaa
tctatcagaaaataaattggtataatatatacttaagactgaaatgctct
aaaaatggattagccaaagcaaatgcaatcttgagcatatagtatgacgt
aaggagggaggtctcggggttttctccattgaacatagtcatctgcccta
atcttattcaatttcaacgtcttgtttcttgtctctagctctagttatga
agtgaagtttattcagacacatttgttctgctctctgattcatttctgca
catagatcaggatttggtattttagtttctcaacatgcacaagtaattaa
taggagagttaatgtaaataagcttaggaaattcaccaaataatatgatt
taataataaggtaatataatggtcttgatgcaaacaaatgaaattttatg
cacaaaaatttaaaagaaagaaatacagaaactttcatgaataaattata
gaaatttactaaatttcaagattataagttatgttttacccctagactca
gagttatgcttattctctttggaacaaaacatttcacaacatcttcgtga
acagcttccaatgaaatttcacctagaagtctttgtttcggttttgtttg
ttgtttggttacatttaagctctggacctattttagtgtattttgtatac
tctggaaatcatcaatttgaatggcaaaggaaaaccctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95819485_95820673
seq2: B6Ng01-113B10.b_48_1237

seq1  GAATTCACTTCTCGCTGTCCATGGATATACCTGATTGCCAACACTAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTCGCTGTCCATGGATATACCTGATTGCCAACACTAGGTA  50

seq1  GTGGAATGTGATGGTTAAAATAACAATTGTCCCATATGTTCATAAATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATGTGATGGTTAAAATAACAATTGTCCCATATGTTCATAAATTTG  100

seq1  GATAGTTGGTCACCAGTTGTTAAAAAAGTTTTGGAAAAATTAAGGATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTGGTCACCAGTTGTTAAAAAAGTTTTGGAAAAATTAAGGATAGA  150

seq1  AGGCCTTGTTGGAGGAGATGTGTCACAGGTCTCCTATCCTATGATCACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTGTTGGAGGAGATGTGTCACAGGTCTCCTATCCTATGATCACTC  200

seq1  AGGTTTCAAAATACATGTATGATGCACAGTGTTCTTCCTTTGCCCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCAAAATACATGTATGATGCACAGTGTTCTTCCTTTGCCCTGTGA  250

seq1  CTGTGCACGAAAATATGAGCTCTTGCTGTTCCTTCATTCAGCCATCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACGAAAATATGAGCTCTTGCTGTTCCTTCATTCAGCCATCATGG  300

seq1  ACTCTAGCACTCTGAAATCATAAACCAAATCAAATATTCTATCTTATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGCACTCTGAAATCATAAACCAAATCAAATATTCTATCTTATTAA  350

seq1  AGAAGTGAACAAAGTATAGTATTCTGATAGGCAAAGTGAGATGCTATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAACAAAGTATAGTATTCTGATAGGCAAAGTGAGATGCTATTAA  400

seq1  TTGTAGTTTTTCTTTCTATGATGAGTAATGTACTAAGAGATATGTATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTTTTTCTTTCTATGATGAGTAATGTACTAAGAGATATGTATCTG  450

seq1  AAAAGGAAAGCCTACATAGGTCATTTTCTCTGAGAAATATTAAAACCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAGCCTACATAGGTCATTTTCTCTGAGAAATATTAAAACCTTG  500

seq1  CTTGTATTCCATTTTCAGACTTTCTAATTCAGATTATAAGCTGTATTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTCCATTTTCAGACTTTCTAATTCAGATTATAAGCTGTATTTGT  550

seq1  ATGTTTTCTTTCGAAGAAAATTCAAATTTACTAAAACAAAAATAAACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCTTTCGAAGAAAATTCAAATTTACTAAAACAAAAATAAACTAT  600

seq1  ATAATACAGAGAAAAATATATACCTCTTTTGGGTTTTGTTGGAAAAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACAGAGAAAAATATATACCTCTTTTGGGTTTTGTTGGAAAAACAG  650

seq1  TATCAAGTTTATAACACTCAGTTTGAAGGCCATTTCAAGACTATTTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGTTTATAACACTCAGTTTGAAGGCCATTTCAAGACTATTTTTGT  700

seq1  TGTAATGTTTTAGATCATAATGAAATCAGTTCAACATTAACACAGTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTTTTAGATCATAATGAAATCAGTTCAACATTAACACAGTGAGA  750

seq1  CTTAAGATGGGGCTGTGTAAAGGTGTCTCTTTTATTATAATTTACTGGTC  800
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  CTTAAGATGGGGCTGTGTAAAGGTGTCTCTTTTTATATAATTTACTGGTC  800

seq1  AGTAGAAGACCCTAGACTGTGATTACTGAGAAAGGTACTATATTGAGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGACCCTAGACTGTGATTACTGAGAAAGGTACTATATTGAGCAT  850

seq1  GTCTAAA-TATCAGTAAATATGAACACTATTCAAAGGCCAACACTAATGA  899
      ||||||| |||||||||||||| |||||||||||||||| ||||||||||
seq2  GTCTAAATTATCAGTAAATATG-ACACTATTCAAAGGCCCACACTAATGA  899

seq1  GAAGAAAAGATGGCAGGTTTGATAGACTTAAGGAAAATAAAACAGAAAAT  949
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAG-AAAGATGGCAGGTTTGATAGACTTAAGGAAAATAAAACAGAAAAT  948

seq1  GTAAAAATCCCAACATGGAAAATGCTTACAATATATATGAGAAACATGAC  999
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  GTAAAAAT-CCAACATGGAAAATGCTTAC-ATATATATGAGAAACATGAC  996

seq1  ATTGCAGCTAGCAATGTAAATATTTTGGTGAGGAGCAGGGTGC-TTTCTT  1048
      ||||||||||||||||||| |||||||   ||||| ||||||| ||||||
seq2  ATTGCAGCTAGCAATGTAATTATTTTGTGAAGGAG-AGGGTGCTTTTCTT  1045

seq1  GTGGTTTGAATTTCTCTACTTCCAAAAAAAGTCCTAAAATGTCAGTGACT  1098
      |||||||||||| |||||||| | ||||||||| |||| |||||  ||||
seq2  GTGGTTTGAATTCCTCTACTTTC-AAAAAAGTCTTAAATTGTCATGGACT  1094

seq1  AGACAGCTTATTATAGAACATAAGTTTATTTGTATTATATTTTATAA--G  1146
      ||||||| ||||  ||||||| |||||  ||| |||| || | ||||  |
seq2  AGACAGC-TATTTAAGAACAT-AGTTTTATTGGATTAAATCTAATAAATG  1142

seq1  GCTG--AATGTCTACCAAGAATG-TTCCTGAACCTGGT--AAGATCTC  1189
      ||||  || ||||  ||| |||| |||| |||||||||  ||||||||
seq2  GCTGGAAAGGTCTCACAAAAATGTTTCCGGAACCTGGTAAAAGATCTC  1190

seq1: chr12_95992285_95993433
seq2: B6Ng01-113B10.g_70_1208 (reverse)

seq1  AAGGGTTTCATTATGACATTCAAATTAGATGA-TTGCAGAGTATACAAAA  49
      ||||||||   | || |||||||||| ||||| || ||||||||||||||
seq2  AAGGGTTTTCCTTTGCCATTCAAATT-GATGATTTCCAGAGTATACAAAA  49

seq1  ATCAACTTAAAATAAGTTCCAAGAGCTAAAATGTAAACAAACAAACAAAC  99
        ||   ||||||| ||  | |||||| |||||||| ||||| |||||||
seq2  TACA--CTAAAATAGGT--CCAGAGCTTAAATGTAACCAAAC-AACAAAC  94

seq1  AAAAACCCGAAACAAAAGAACTCTAGGTGAAATTTCATTGGAAGCTGTTT  149
      ||||  ||||||| |||||  |||||||||||||||||||||||||| ||
seq2  AAAA--CCGAAAC-AAAGACTTCTAGGTGAAATTTCATTGGAAGCTG-TT  140

seq1  CACGAAGGTGTTGTGAAATGTGTTGTTCCAAAGAGGAATAAGCATAACTC  199
      ||||||| ||||||||||||| |||||||||||| |||||||||||||||
seq2  CACGAAGATGTTGTGAAATGTTTTGTTCCAAAGA-GAATAAGCATAACTC  189

seq1  TGAGTCTAGGGGTAAAACATAACTTATAATCTTGAAATTTAGTAAATTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTAGGGGTAAAACATAACTTATAATCTTGAAATTTAGTAAATTTC  239

seq1  TATAATTTATTCATGAAAGTTTCTGTATTTCTTTCTTTTAAATTTTTGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTATTCATGAAAGTTTCTGTATTTCTTTCTTTTAAATTTTTGTG  289

seq1  CATAAAATTTCATTTGTTTGCATCAAGACCATTATATTACCTTATTATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATTTCATTTGTTTGCATCAAGACCATTATATTACCTTATTATTA  339

seq1  AATCATATTATTTGGTGAATTTCCTAAGCTTATTTACATTAACTCTCCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATTATTTGGTGAATTTCCTAAGCTTATTTACATTAACTCTCCTA  389

seq1  TTAATTACTTGTGCATGTTGAGAAACTAAAATACCAAATCCTGATCTATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTACTTGTGCATGTTGAGAAACTAAAATACCAAATCCTGATCTATG  439

seq1  TGCAGAAATGAATCAGAGAGCAGAACAAATGTGTCTGAATAAACTTCACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAATGAATCAGAGAGCAGAACAAATGTGTCTGAATAAACTTCACT  489

seq1  TCATAACTAGAGCTAGAGACAAGAAACAAGACGTTGAAATTGAATAAGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACTAGAGCTAGAGACAAGAAACAAGACGTTGAAATTGAATAAGAT  539

seq1  TAGGGCAGATGACTATGTTCAATGGAGAAAACCCCGAGACCTCCCTCCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCAGATGACTATGTTCAATGGAGAAAACCCCGAGACCTCCCTCCTT  589

seq1  ACGTCATACTATATGCTCAAGATTGCATTTGCTTTGGCTAATCCATTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCATACTATATGCTCAAGATTGCATTTGCTTTGGCTAATCCATTTTT  639

seq1  AGAGCATTTCAGTCTTAAGTATATATTATACCAATTTATTTTCTGATAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATTTCAGTCTTAAGTATATATTATACCAATTTATTTTCTGATAGA  689

seq1  TTTATTCTGGTTCAGATTTTATAACAAAGTCTTACTCAATTGTAAATATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGGTTCAGATTTTATAACAAAGTCTTACTCAATTGTAAATATT  739

seq1  GACTATGGACAAGGTACTCAATAAATTTTTTTTCTATTTTATACTAGTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGGACAAGGTACTCAATAAATTTTTTTTCTATTTTATACTAGTTC  789

seq1  TCAATAGATGTTTTTTCTATTTTTTATTAGTTCATATAATGACATACCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGATGTTTTTTCTATTTTTTATTAGTTCATATAATGACATACCTA  839

seq1  TAATGTTCTATTTTTTAATTAAGCAGAATAATGAACAAAATTAAATAAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCTATTTTTTAATTAAGCAGAATAATGAACAAAATTAAATAAAG  889

seq1  CACTTTGGTTATATTTGTACTATATACAAGTTAATTATCCCTTCTGGATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGGTTATATTTGTACTATATACAAGTTAATTATCCCTTCTGGATG  939

seq1  ATTTACATCAAAATTTATAATAATATTTTTTAGTATTTAATTTAGTGTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATCAAAATTTATAATAATATTTTTTAGTATTTAATTTAGTGTGG  989

seq1  TTTATTCTGGGGGGTTCTTATTTTGGTCATGCAATTACTTATATAAATGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGGGGGGTTCTTATTTTGGTCATGCAATTACTTATATAAATGC  1039

seq1  TCAATATAATATGAAGTATTTTCAGTGTCATGTTTAGATTCCTAAAAGTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATAATATGAAGTATTTTCAGTGTCATGTTTAGATTCCTAAAAGTC  1089

seq1  TGACAACTTGATCAACTATGGCTATGGATTTTACCCAGTGAAGTGAATTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACTTGATCAACTATGGCTATGGATTTTACCCAGTGAAGTGAATTC  1139