BAC Information

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BAC

Clone NameB6Ng01-116P24
Chromosome12 (Build37)
Map Location 59,917,617 - 59,918,528
singlet/doubletsinglet
Overlap genenone
Upstream geneSstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639, LOC665644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116P24.bB6Ng01-116P24.g
ACCDH921853DH921854
length972138
definitionDH921853|Mus musculus domesticus DNA, BAC clone: B6Ng01-116P24, 5' end.DH921854|Mus musculus domesticus DNA, BAC clone: B6Ng01-116P24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgtttatctctgtactccactttttaattgggttatttgggt
tttttggactctaacatctttagttctttaaataatttgatcttaaagcc
tgagccactggtgttttctgttcaggaaattttcccttgtaccaatgtat
tccaagctatttcccactttcccttctattagagtcaatgtatctggttc
tatattgaggtccttgatccacttggacttgaactttgagcagggtgata
aatatggatcagttgacattcttctacacgcaggcatcaagttaaaccag
caccatttgttgaagatgctttctttttttccattttgacttctttatca
aaaacccttcaccatgatcaagtaagcttaatccaagggatgtaggattg
gttcaatatacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatc
aacataatccactatataaacaaatgaaagaaaaaaaatcccacaattat
ctcatttgatgctgaaaaagcctttgacaaaatacaacacccctttatgt
taaaagttaaaagcaaacaaaatttggaggctgcctggtaataatcaacc
caaccccaaataagggacctatttctgggtaagggaaaggaatgagtggt
ggagggcaggacaataaaaaattctccactgtatttatagcatgcatttg
tgctcaatggtgagcacagtgggttctttcctcccttgagctgtgtgtat
cttcttcatgcatcctcctttttctgccttatcttgaaccatggagcctg
gagatgtgtacctcatcaatgatctcttttttctcctgtcctttgacaag
ggtccagcaaacaggaggtcacggagggtccagagagaggaaatgaagtc
aggttgtttgtttttctcttagtaccttagacttgtaagccacagctcct
tgaaggtcttcacacgctctct
cagaccatcttggtctgtataaggtccgggtcagctaggactgcacagtg
agaaccttactcagaaagaaagaaaggaggtgaagggagggagcgaggga
gggagaaaaaggaagaaagaaggagggaaggaaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59917617_59918528
seq2: B6Ng01-116P24.b_105_1017

seq1  TCTAACATCTTTAGTTCTTTAAATAATTTGATCTTAAAGCCTGAGCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACATCTTTAGTTCTTTAAATAATTTGATCTTAAAGCCTGAGCCACT  50

seq1  GGTGTTTTCTGTTCAGGAAATTTTCCCTTGTACCAATGTATTCCAAGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTCTGTTCAGGAAATTTTCCCTTGTACCAATGTATTCCAAGCTA  100

seq1  TTTCCCACTTTCCCTTCTATTAGAGTCAATGTATCTGGTTCTATATTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCACTTTCCCTTCTATTAGAGTCAATGTATCTGGTTCTATATTGAG  150

seq1  GTCCTTGATCCACTTGGACTTGAACTTTGAGCAGGGTGATAAATATGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGATCCACTTGGACTTGAACTTTGAGCAGGGTGATAAATATGGAT  200

seq1  CAGTTGACATTCTTCTACACGCAGGCATCAAGTTAAACCAGCACCATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGACATTCTTCTACACGCAGGCATCAAGTTAAACCAGCACCATTTG  250

seq1  TTGAAGATGCTTTCTTTTTTTCCATTTTGACTTCTTTATCAAAAACCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATGCTTTCTTTTTTTCCATTTTGACTTCTTTATCAAAAACCCTT  300

seq1  CACCATGATCAAGTAAGCTTAATCCAAGGGATGTAGGATTGGTTCAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGATCAAGTAAGCTTAATCCAAGGGATGTAGGATTGGTTCAATAT  350

seq1  AC-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAACATAATC  399
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAACATAATC  400

seq1  CACTATATAAACAAATGAAAGAAAAAAAATCCCACAATTATCTCATTTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATATAAACAAATGAAAGAAAAAAAATCCCACAATTATCTCATTTGA  450

seq1  TGCTGAAAAAGCCTTTGACAAAATACAACACCCCTTTATGTTAAAAGTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAAAGCCTTTGACAAAATACAACACCCCTTTATGTTAAAAGTTA  500

seq1  AAAGCAAACAAAATTTGGAGGCTGCCTGGTAATAATCAACCCAACCCCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAACAAAATTTGGAGGCTGCCTGGTAATAATCAACCCAACCCCAA  550

seq1  ATAAGGGACCTATTTCTGGGTAAGGGAAAGGAATGAGTGGTGGAGGGCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGACCTATTTCTGGGTAAGGGAAAGGAATGAGTGGTGGAGGGCAG  600

seq1  GACGATAAAAAATTCTCCACTGTATTTATAGCATGCATTTGTGCTCAATG  649
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATAAAAAATTCTCCACTGTATTTATAGCATGCATTTGTGCTCAATG  650

seq1  GTGAGCACAGTGGGTTCTTTCCTTCCTTGAGCTGTGTGTATCTTCTTCAT  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGAGCACAGTGGGTTCTTTCCTCCCTTGAGCTGTGTGTATCTTCTTCAT  700

seq1  GCATCCTCC-TTTTCTGCCTTATCTTGAACCATGGAGCCTGGAGATGTGT  748
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTCCTTTTTCTGCCTTATCTTGAACCATGGAGCCTGGAGATGTGT  750

seq1  ACCTCATCAATGATCTCTTTTTTCTCCTGTCCTTTGACAA-GGTCCAGCA  797
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCTCATCAATGATCTCTTTTTTCTCCTGTCCTTTGACAAGGGTCCAGCA  800

seq1  AACAGGAGGTCACGGAGGGTCCAGAGAGAGGAAATGAAGTCAGGTTGTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAGGTCACGGAGGGTCCAGAGAGAGGAAATGAAGTCAGGTTGTTT  850

seq1  GTTTTTCTCTTAGTACCTTAGACTTGTAAAGCCACAGCTCCATGAAGGTC  897
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  GTTTTTCTCTTAGTACCTTAGACTTGT-AAGCCACAGCTCCTTGAAGGTC  899

seq1  TCCACACAGCTCTCT  912
      | ||||| |||||||
seq2  TTCACAC-GCTCTCT  913