BAC Information

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BAC

Clone NameB6Ng01-119P16
Chromosome12 (Build37)
Map Location 50,753,886 - 50,755,047
singlet/doubletsinglet
Overlap genenone
Upstream geneGA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
Downstream geneLOC665071, LOC665077, LOC100039455, Prkcm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119P16.bB6Ng01-119P16.g
ACCDH924048DH924049
length1,1401,244
definitionDH924048|Mus musculus domesticus DNA, BAC clone: B6Ng01-119P16, 5' end.DH924049|Mus musculus domesticus DNA, BAC clone: B6Ng01-119P16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaatactcaaaaactctttcttcttgaacttccctagtattg
cgatgtggataaatgaagactgattcttagaagtttctcagatccaaatc
attagagatgttcggctttttttcctgaattttcacttcgcatccagttt
ttagtgaactgtgttaagttcaatctgtgagataaattctcagttttatg
accttttaccacctccaacaactaggaatgtcgcaaagtgtcacattctg
aagctgtggattcttagctggacttctaaagtatacttctgttctttgca
gtggtttgttgtggcaacagtaccatgttaatgctttaagcaggaattca
ttttttttatagttctaaatgtcagacatcgtaagtttatttccaagcta
aagctgctatagctggacccctctgcaggcactgaggagaaagtccattc
cttcccttttatagattctgtaagttggctcaggacttcttccttggctc
aggactacttccttgcttgcctccaatttcttgttgctatggtcacatga
ccttattctggtctgattcctttttataaaggctgttgagattgtatcaa
atttactctaataatccaggttattcccatctcaaatgtctcagtttaat
aaaaatttcccctttgccgtataaaataagagtcacacattgtagaggtt
ataactgcaagatggagggtcacactgggcttgccacactcccttactgt
acaaatgaaacaattggaatatttaaatcatcttctttgtgctttttact
ttgtacagcacaaaatctgaaaagcatacatggcctgaaggccatatgag
atcagaccctgtataagttctccagtatcatcagctgccataaactgtgc
tccagtcacatctgtttgttgggccacctttcagatacaccagacactct
cttgcttcagagcttctgcagttactcacactccaggagtgtctaccctc
acagcacttttcactctttgcagctgtgatgatgtcatatatgcatgcct
ctgtggatacatcatgaaacagcccttttttctactgtcgctacacgtca
gcttgtagtctcatagcaataaatccctgatagtactagt
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggttgactctttgaatagtacttgtttccacttttt
tgatttagcccctgagtttgattatttcctgacatctactcctcttgggt
gaatttgcttccttttgttccagagctttaggtgtgttgtcaagctgcta
atatgtgctctctctagtttctttttggaggcactcagtgctatgagttt
actcttagaaatgctttcattgtgtcccataagtttgtttatgttgtcgc
ttcatttttattaaactccaaaaagtccttaatttctttctttattcctt
ttttgaccaaggtatcattgagaaaagtgttgttcagtttccatgtgaat
gttggctttctattatttattttgtaattgaagattagccttagttcatt
gttatctgacaggatgcatggaacaatttcaatatttttgtatctgttga
ggctttttttgtgaccaatcatgttgtcaattttggagaaggtaccatga
ggtgctgagaagaaggtatatccttttgttttaggataaaatgttctgtg
gatatatattagatccatttgtttcataacttctgttagtttcattgtgt
ccctgtttattttctgtttcgattatctgtccattagtgaaagtggtgtg
ttgaagtcttccactattattgtgtgaggtgcaatgtgtactttgagctt
tactaaagtttctttaatgaatgtggctgacctagtatttggagcataga
tatacagaattgagagttcctcttggaggattttaactttgatgagtatg
aagtgccctccttgtctttttttgataactttgggtttaagtcgatttta
atagaattagaatggctaattccagcttgtttctcgtacatttgctcgga
aaattgttttcagcctttcattctgaggtagtggtctgttcttttttcct
ggaaatgggatttcttgtagcaagactaaaggtggacctgtttgtgtagc
gaactgttagctaatgtctttttatgggagtgaatcctatggattacagc
actcacggcaagcatgtgtgcgctctcattaccttggtgcgaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_50753886_50755047
seq2: B6Ng01-119P16.b_46_1185 (reverse)

seq1  ACTAGTACTAACTCAGGGATTTAATTTGCTATGAGAACTACCAAAGCTGA  50
      ||||||||||  |||||||||||  |||||||||| |||||  |||||||
seq2  ACTAGTACTA--TCAGGGATTTA--TTGCTATGAG-ACTAC--AAGCTGA  43

seq1  CGTTGGTAGGCGACCAAGTAG-AAAAAGGGCTGTTTTCCATGATGTATCC  99
      |||  ||| |||||  ||||| ||||||||||||||  ||||||||||||
seq2  CGT--GTA-GCGAC--AGTAGAAAAAAGGGCTGTTT--CATGATGTATCC  86

seq1  ACAGAGGCCATGCCATTATATGACATCCAATCACAAGCTGCAAAGAGGTG  149
      ||||||| |||||   |||||||||||  ||||| ||||||||||| |||
seq2  ACAGAGG-CATGC--ATATATGACATC--ATCAC-AGCTGCAAAGA-GTG  129

seq1  AAAAGTGCTTGTGAGGGTAGAACACTCCTGGAGTGTGGAGTAACTGCAGA  199
      |||||||| ||||||||||| ||||||||||||||| |||||||||||||
seq2  AAAAGTGC-TGTGAGGGTAG-ACACTCCTGGAGTGT-GAGTAACTGCAGA  176

seq1  AGCTCTGAAGCAAGAGAGTGTCTGGTGTATCTGAAAGGTGG-CCAACAAA  248
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGCTCTGAAGCAAGAGAGTGTCTGGTGTATCTGAAAGGTGGCCCAACAAA  226

seq1  CAGATGTGACTGGAGCACAGTTTATGGCAGCTGATGATACTGGAGAACTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGACTGGAGCACAGTTTATGGCAGCTGATGATACTGGAGAACTT  276

seq1  ATACAGGGTCTGATCTCATATGGCCTTCAGGCCATGTATGCTTTTCAGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGGTCTGATCTCATATGGCCTTCAGGCCATGTATGCTTTTCAGAT  326

seq1  TTTGTGCTGTACAAAGTAAAAAGCACAAAGAAGATGATTTAAATATTCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTGTACAAAGTAAAAAGCACAAAGAAGATGATTTAAATATTCCA  376

seq1  ATTGTTTCATTTGTACAGTAAGGGAGTGTGGCAAGCCCAGTGTGACCCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCATTTGTACAGTAAGGGAGTGTGGCAAGCCCAGTGTGACCCTC  426

seq1  CATCTTGCAGTTATAACCTCTACAATGTGTGACTCTTATTTTATACGGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCAGTTATAACCTCTACAATGTGTGACTCTTATTTTATACGGCA  476

seq1  AAGGGGAAATTTTTATTAAACTGAGACATTTGAGATGGGAATAACCTGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAAATTTTTATTAAACTGAGACATTTGAGATGGGAATAACCTGGA  526

seq1  TTATTAGAGTAAATTTGATACAATCTCAACAGCCTTTATAAAAAGGAATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGAGTAAATTTGATACAATCTCAACAGCCTTTATAAAAAGGAATC  576

seq1  AGACCAGAATAAGGTCATGTGACCATAGCAACAAGAAATTGGAGGCAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGAATAAGGTCATGTGACCATAGCAACAAGAAATTGGAGGCAAGC  626

seq1  AAGGAAGTAGTCCTGAGCCAAGGAAGAAGTCCTGAGCCAACTTACAGAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGTAGTCCTGAGCCAAGGAAGAAGTCCTGAGCCAACTTACAGAAT  676

seq1  CTATAAAAGGGAAGGAATGGACTTTCTCCTCAGTGCCTGCAGAGGGGTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAAGGGAAGGAATGGACTTTCTCCTCAGTGCCTGCAGAGGGGTCC  726

seq1  AGCTATAGCAGCTTTAGCTTGGAAATAAACTTACGATGTCTGACATTTAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAGCAGCTTTAGCTTGGAAATAAACTTACGATGTCTGACATTTAG  776

seq1  AACTATAAAAAAAATGAATTCCTGCTTAAAGCATTAACATGGTACTGTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAAAAAAAATGAATTCCTGCTTAAAGCATTAACATGGTACTGTTG  826

seq1  CCACAACAAACCACTGCAAAGAACAGAAGTATACTTTAGAAGTCCAGCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACAAACCACTGCAAAGAACAGAAGTATACTTTAGAAGTCCAGCTA  876

seq1  AGAATCCACAGCTTCAGAATGTGACACTTTGCGACATTCCTAGTTGTTGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCACAGCTTCAGAATGTGACACTTTGCGACATTCCTAGTTGTTGG  926

seq1  AGGTGGTAAAAGGTCATAAAACTGAGAATTTATCTCACAGATTGAACTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTAAAAGGTCATAAAACTGAGAATTTATCTCACAGATTGAACTTA  976

seq1  ACACAGTTCACTAAAAACTGGATGCGAAGTGAAAATTCAGGAAAAAAAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTTCACTAAAAACTGGATGCGAAGTGAAAATTCAGGAAAAAAAGC  1026

seq1  CGAACATCTCTAATGATTTGGATCTGAGAAACTTCTAAGAATCAGTCTTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACATCTCTAATGATTTGGATCTGAGAAACTTCTAAGAATCAGTCTTC  1076

seq1  ATTTATCCACATCGCAATACTAGGGAAGTTCAAGAAGAAAGAGTTTTTGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCCACATCGCAATACTAGGGAAGTTCAAGAAGAAAGAGTTTTTGA  1126

seq1  GTATTACTGAATTC  1162
      ||||||||||||||
seq2  GTATTACTGAATTC  1140