BAC Information

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BAC

Clone NameB6Ng01-122G21
Chromosome12 (Build37)
Map Location 70,283,456 - 70,391,992
singlet/doubletdoublet
Overlap geneRpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1
Upstream geneLOC100040696, LOC665967, LOC665973, Rps29, Ppil5
Downstream geneKlhdc2, Sdccag1, Arf6, LOC100040856, LOC100040862, Gm71, Sos2, LOC100040879, L2hgdh, Atp5s, Cdkl1, Map4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122G21.bB6Ng01-122G21.g
ACCDH925855DH925856
length1,1791,121
definitionDH925855|Mus musculus domesticus DNA, BAC clone: B6Ng01-122G21, 5' end.DH925856|Mus musculus domesticus DNA, BAC clone: B6Ng01-122G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,390,802 - 70,391,992)(70,283,456 - 70,284,613)
sequence
gaattcagatcctagaacctgtaagacccgaatgcctgtgctctgggcac
cgggaggaagagaggagagcagctcccgagagcctactccctagccaacc
tcagctgcgttggtaaactccatggagagacagagtctcaaaaaaaagat
ggagagtaactgaggcaaatgcacatgtcatctcctggtggacacatcca
catacatgtacacatatgcatccacatgcaaatgtataacacacacacaa
aagcacacacgcgtgggcaagttcttcagtcccttcataagaaccaagaa
gataaaccatttccattctttgtgtttaccttttatttccactcaaagtc
gatgttcaagaatatttttagattctgagaagttgactcacatcagaacc
aaacctatttataacaacatgcttttgatcttggaatcaaaatcaagaaa
taggtagaatactgtactggctggttttgtgtcaacttgacacagctgga
gttatcacagagaaaggagcttcagttgaggaaatgcctccatgagatcc
aactgtaaggcattttctcaattagtgatcaagcgggaaacttgtgggtg
ggaccatctctgggctggtagtcttgggttctataagagagcaggctgag
caaggcaggggaagcaagccagtaaaggacatccctccatggcctctgca
tcagctcctgctccctgacctgcttgagttccagtcccgacttctttcag
tgatcaacagcaatgtggaagtgtaagccaaataaaccctttcctcccca
gctgcttcttggtcctgatgtttgtgcaggaatagaaaccctgactgaga
caaatactgaaggttttcaattcagtgttgctgccagaacagctaattca
tataatgtcagcattctgaagagcaccacaagtatgtctgttataaacaa
gggcttttctccttcagacgaaagcagcattttttttttgtgaactgtac
atgagtcattagataataaagcatattgtttagtgtgagaaaatgttatc
agagaaagaagataaaaatagctcaatggggctgaagaacagctcagaag
tagaggtcactgctctcaggggtcagagtgttccctcccacctacatcag
ctcaccagaatctccttataacacgagtt
gaattctatgaccatcacatatgttctgtgcccattattctgtagctact
gcttatctgtatgacttcttgtagggcacttagtacacactttgcctagc
atgcagaaagcactgggttcaacccaacacagcaccttagaaataggata
tggtgcaattctgtacttctagtatttaggaggcagaggtagacccagac
tcaaattatgtttgaaaacaaaaccccctaaatatgcaatcctactgaga
atcaaaacacaaggcttggtatcattaacagtaactttattctctagcag
gtcatttctctactgcttcagtattttcctctcagagaacacaagtttta
gaactggatcacttggcccttcctcttcttgtcgcctcccagttcaaaat
gcttgcatctcttaatggccagcatcctcttggatctgcagttgggctca
acacactcaagcctgagcacaatcttctttgtggttttggccttctttcg
aaagattggctttgtctgcccaccgtagccactctgcttgcgatcgtagc
gccgctttccttgggcatacagggaatccttgcccttcttatactgggtc
actttgtgaggctgatgcttgccacatttcttacagaaagtccttcgggt
ttttggtacgttgaccatgtttgcagtagaagtgtctgcgatgagaactg
taagaaagtttcagacattaaagatcttcaaactcgaaagttttaaacag
gtataatttgtaggaacatataaaaaaaaaacagtaatgttcgaaaattt
gtgaacccaccaagtactcatttcccacgtgaataaaaggccaacacgca
gctgagtggatgagcactggcttaaacaccggggttcaatccttacactc
aagcctatagaaaactgtttttgtttttaaactaaacgaggcattacagt
aaaactcagacctgatgatgtgtctgggagctgagcagagatgctagttg
agtctgcctagcgtcaaagactgacacttggagtgtcatacagtctccca
acaagcgtcaattctaaggtcactgcaaggcaacgcaatgcgtcggtaga
aagttgctcggactacaccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_70390802_70391992
seq2: B6Ng01-122G21.b_47_1225 (reverse)

seq1  AACTCGTGTTAT-AGGAGATTCTGTGTGAGCTGATGTAGGTGGG-GGGAC  48
      |||||||||||| ||||||||||| ||||||||||||||||||| |||| 
seq2  AACTCGTGTTATAAGGAGATTCTG-GTGAGCTGATGTAGGTGGGAGGGAA  49

seq1  AACTCTGACCCCCTGGAAGAGCAGTGAACCTCTTAACCTCTGAGCTGTCT  98
       ||||||| ||||||  ||||||||| ||||||  || |||||||||| |
seq2  CACTCTGA-CCCCTG--AGAGCAGTG-ACCTCT--ACTTCTGAGCTGT-T  92

seq1  CTCCAGCCCCATTGAGCCTATTTTTAATCTTCTTTCTTCTGATAACATTT  148
      || ||||||||||||| |||||||| |||||||||| |||||||||||||
seq2  CTTCAGCCCCATTGAG-CTATTTTT-ATCTTCTTTC-TCTGATAACATTT  139

seq1  TCTCACACTAAACAATATGCTTTATTATCTAATGACTCATTGTACAAGTT  198
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  TCTCACACTAAACAATATGCTTTATTATCTAATGACTCA-TGTAC-AGTT  187

seq1  CACAAAAAAAAAATGCTGCTTTCGTTCTGAAGGAGAAAAGCCCTTGTTTA  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CACAAAAAAAAAATGCTGCTTTCG-TCTGAAGGAGAAAAGCCCTTGTTTA  236

seq1  TAACAGACATACTTGTGGTGCTCTTCAGAATGCTGACATTATATGAATTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGACATACTTGTGGTGCTCTTCAGAATGCTGACATTATATGAATTA  286

seq1  GCTGTTCTGGCAGCAACACTGAATTGAAAACCTTCAGTATTTGTCTCAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTGGCAGCAACACTGAATTGAAAACCTTCAGTATTTGTCTCAGT  336

seq1  CAGGGTTTCTATTCCTGCACAAACATCAGGACCAAGAAGCAGCTGGGGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTATTCCTGCACAAACATCAGGACCAAGAAGCAGCTGGGGAG  386

seq1  GAAAGGGTTTATTTGGCTTACACTTCCACATTGCTGTTGATCACTGAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGTTTATTTGGCTTACACTTCCACATTGCTGTTGATCACTGAAAG  436

seq1  AAGTCGGGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGGGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAG  486

seq1  GCCATGGAGGGATGTCCTTTACTGGCTTGCTTCCCCTGCCTTGCTCAGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGAGGGATGTCCTTTACTGGCTTGCTTCCCCTGCCTTGCTCAGCC  536

seq1  TGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCAC  586

seq1  AAGTTTCCCGCTTGATCACTAATTGAGAAAATGCCTTACAGTTGGATCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCCGCTTGATCACTAATTGAGAAAATGCCTTACAGTTGGATCTC  636

seq1  ATGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCT  686

seq1  GTGTCAAGTTGACACAAAACCAGCCAGTACAGTATTCTACCTATTTCTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAGTTGACACAAAACCAGCCAGTACAGTATTCTACCTATTTCTTG  736

seq1  ATTTTGATTCCAAGATCAAAAGCATGTTGTTATAAATAGGTTTGGTTCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATTCCAAGATCAAAAGCATGTTGTTATAAATAGGTTTGGTTCTG  786

seq1  ATGTGAGTCAACTTCTCAGAATCTAAAAATATTCTTGAACATCGACTTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGTCAACTTCTCAGAATCTAAAAATATTCTTGAACATCGACTTTG  836

seq1  AGTGGAAATAAAAGGTAAACACAAAGAATGGAAATGGTTTATCTTCTTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAATAAAAGGTAAACACAAAGAATGGAAATGGTTTATCTTCTTGG  886

seq1  TTCTTATGAAGGGACTGAAGAACTTGCCCACGCGTGTGTGCTTTTGTGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGAAGGGACTGAAGAACTTGCCCACGCGTGTGTGCTTTTGTGTG  936

seq1  TGTGTTATACATTTGCATGTGGATGCATATGTGTACATGTATGTGGATGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATACATTTGCATGTGGATGCATATGTGTACATGTATGTGGATGT  986

seq1  GTCCACCAGGAGATGACATGTGCATTTGCCTCAGTTACTCTCCATCTTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACCAGGAGATGACATGTGCATTTGCCTCAGTTACTCTCCATCTTTT  1036

seq1  TTTTGAGACTCTGTCTCTCCATGGAGTTTACCAACGCAGCTGAGGTTGGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGACTCTGTCTCTCCATGGAGTTTACCAACGCAGCTGAGGTTGGC  1086

seq1  TAGGGAGTAGGCTCTCGGGAGCTGCTCTCCTCTCTTCCTCCCGGTGCCCA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGTAGGCTCTCGGGAGCTGCTCTCCTCTCTTCCTCCCGGTGCCCA  1136

seq1  GAGCACAGGCATTCGGGTCTTACAGGTTCTAGGATCTGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGGCATTCGGGTCTTACAGGTTCTAGGATCTGAATTC  1179

seq1: chr12_70283456_70284613
seq2: B6Ng01-122G21.g_64_1184

seq1  GAATTCTATGACCATCACATATGTTCTGTGCCCATTATTCTGTAGCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGACCATCACATATGTTCTGTGCCCATTATTCTGTAGCTACT  50

seq1  GCTTATCTGTATGACTTCTTGTAGGGCACTTAGTACACACTTTGCCTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCTGTATGACTTCTTGTAGGGCACTTAGTACACACTTTGCCTAGC  100

seq1  ATGCAGAAAGCACTGGGTTCAACCCAACACAGCACCTTAGAAATAGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAAAGCACTGGGTTCAACCCAACACAGCACCTTAGAAATAGGATA  150

seq1  TGGTGCAATTCTGTACTTCTAGTATTTAGGAGGCAGAGGTAGACCCAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAATTCTGTACTTCTAGTATTTAGGAGGCAGAGGTAGACCCAGAC  200

seq1  TCAAATTATGTTTGAAAACAAAACCCCCTAAATATGCAATCCTACTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTATGTTTGAAAACAAAACCCCCTAAATATGCAATCCTACTGAGA  250

seq1  ATCAAAACACAAGGCTTGGTATCATTAACAGTAACTTTATTCTCTAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACACAAGGCTTGGTATCATTAACAGTAACTTTATTCTCTAGCAG  300

seq1  GTCATTTCTCTACTGCTTCAGTATTTTCCTCTCAGAGAACACAAGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCTCTACTGCTTCAGTATTTTCCTCTCAGAGAACACAAGTTTTA  350

seq1  GAACTGGATCACTTGGCCCTTCCTCTTCTTGTCGCCTCCCAGTTCAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGATCACTTGGCCCTTCCTCTTCTTGTCGCCTCCCAGTTCAAAAT  400

seq1  GCTTGCATCTCTTAATGGCCAGCATCCTCTTGGATCTGCAGTTGGGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCATCTCTTAATGGCCAGCATCCTCTTGGATCTGCAGTTGGGCTCA  450

seq1  ACACACTCAAGCCTGAGCACAATCTTCTTTGTGGTTTTGGCCTTCTTTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCAAGCCTGAGCACAATCTTCTTTGTGGTTTTGGCCTTCTTTCG  500

seq1  AAAGATTGGCTTTGTCTGCCCACCGTAGCCACTCTGCTTGCGATCGTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTGGCTTTGTCTGCCCACCGTAGCCACTCTGCTTGCGATCGTAGC  550

seq1  GCCGCTTTCCTTGGGCATACAGGGAATCCTTGCCCTTCTTATACTGGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTTTCCTTGGGCATACAGGGAATCCTTGCCCTTCTTATACTGGGTC  600

seq1  ACTTTGTGAGGCTGATGCTTGCCACATTTCTTACAGAAAGTCCTTCGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTGAGGCTGATGCTTGCCACATTTCTTACAGAAAGTCCTTCGGGT  650

seq1  TTTTGGTACGTTGACCATGTTTGCAGTAGAAGTGTCTGCGATGAGAACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTACGTTGACCATGTTTGCAGTAGAAGTGTCTGCGATGAGAACTG  700

seq1  TAAGAAAGTTTCAGACATTAAAGATCTTCAAACTCGAAAGTTTTAAACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGTTTCAGACATTAAAGATCTTCAAACTCGAAAGTTTTAAACAG  750

seq1  GTATAATTTGTAGGAACATATAAAAAAAAAACAGTAATGTTCGAAAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATTTGTAGGAACATATAAAAAAAAAACAGTAATGTTCGAAAATTT  800

seq1  GTGAACCCACCAAGTACTCATTTCCCACGTGAATAAAAGGCCAACACGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACCCACCAAGTACTCATTTCCCACGTGAATAAAAGGCCAACACGCA  850

seq1  GCTGAGTGGATGAGCACTGGCTTAAACACCGGGGTTCAATCCTTACCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  GCTGAGTGGATGAGCACTGGCTTAAACACCGGGGTTCAATCCTTA-CAC-  898

seq1  TCAAGCCTATAGAAAAACTGTTTTTTGTTTTTTTAAACTAAAACGAGGCA  950
      |||||||||||| |||||||||||   | |||||||||| ||||||||||
seq2  TCAAGCCTATAG-AAAACTGTTTT---TGTTTTTAAACT-AAACGAGGCA  943

seq1  TTAACAGTTAAAAACTCAGACCTGATGGAGTGTGTCCTGGGAGGCTGAGG  1000
      || |||||  |||||||||||||||||  ||||   |||||| ||||| |
seq2  TT-ACAGT--AAAACTCAGACCTGATGATGTGT---CTGGGA-GCTGA-G  985

seq1  CAGAGGATTGCTAGTTGAGGTCTGCCTTAGCGTCCAAAGGAACTGACACT  1050
      |||||   |||||||||| ||||||| |||||| |||||  |||||||||
seq2  CAGAG--ATGCTAGTTGA-GTCTGCC-TAGCGT-CAAAG--ACTGACACT  1028

seq1  TGGAGTGGCCATTACAGTTCTCCCCAAACCAGCGTCCAATTTCTTAGGTC  1100
      ||||||| |   ||||| ||||||  ||| ||||||  | |||| |||  
seq2  TGGAGTGTC--ATACAG-TCTCCC--AACAAGCGTC--AATTCTAAGG--  1069

seq1  TCACTGCAAGGACAACGCAGTGGCGTCCGGGTAGAGAAGTTTTGCTCGGA  1150
      ||||||||||| ||||||| | |||||  |||||| |||  |||||||||
seq2  TCACTGCAAGG-CAACGCAAT-GCGTC--GGTAGA-AAG--TTGCTCGGA  1112

seq1  CTAC-CCCA  1158
      |||| ||||
seq2  CTACACCCA  1121