BAC Information

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BAC

Clone NameB6Ng01-127L16
Chromosome12 (Build37)
Map Location 18,999,747 - 19,103,359
singlet/doubletdoublet
Overlap geneLOC668570, EG668413
Upstream geneLOC673341, EG245297, LOC100042573, LOC668539, LOC100043324, LOC636282, EG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568
Downstream geneLOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594, EG668600, LOC100042727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127L16.bB6Ng01-127L16.g
ACCDH929768DH929769
length317835
definitionDH929768|Mus musculus domesticus DNA, BAC clone: B6Ng01-127L16, 5' end.DH929769|Mus musculus domesticus DNA, BAC clone: B6Ng01-127L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,999,747 - 19,000,063)(19,102,599 - 19,103,359)
sequence
gaattcaggatcactagcccagggttgtaccacctatactgggctgggct
ctgctccatcaatcattagttaagaaaataccctctggtcaggcatggtg
gcacatgtctttaatcggggctcataggagacaggaggcactctgtgagt
tcaaggctgacctggtctaaaaagtgagttctagaacagccaggctgtta
catagaggaaccctgtttcaagaaacaaaacaaaagggaggaaaggaagg
agatagggagggaggttgagagacagggacagagagagagagagagagag
agagagagagagagaga
gaattcagaggacaacttgtggaagctggttctcttttcctaccatgtgg
gtcttagggattgaacccaggctgctaggcttggaagcaagcacctttcc
ccacagagtcagatcactggaccaaatacagagatggtttagagcatgga
gcgggaaggatgcagggtgcacataagcattgctcctgtgaagaactgac
tgctgactcatcctttactgtgtcgttctgatttctataggaagtcctat
agacagctatgtgtgtgtatgttgtacatgtgtgtgcagatgaacaccca
cctgggcagaggccaaacaggaatactggtgttcacagtattcccttttc
tctctcactgaacccggctggggcctaccattttagctaggctgcctgct
cagcaagcttctgggactcacttgtcccctagttctagggtttcgggcat
gctcagccacttctgactattccgtgggtgttgggatcagaactcaggtc
ctcatgctgggtatcatgtgttcttccccactgagccattttcccagttc
ttgctttgacaattcttaatcacatatctgagcctcagatctcattagag
gtttttttgttttgttttgttttgtcttgttttgtttaaaaaaaaaaaga
catgttttatagaattgtgtaaataaacctgatggatgagctcagctggg
gcctgatgtccagcaagcaatcgatagatgcttggctttatcattactct
ctgcaaagacaggcagtcctttagtacaccaggtagcaattgggcagagg
aatgacctggtgtatggggtcggggatgggggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_18999747_19000063
seq2: B6Ng01-127L16.b_44_360

seq1  GAATTCAGGATCACTAGCCCAGGGTTGTACCACCTATACTGGGCTGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATCACTAGCCCAGGGTTGTACCACCTATACTGGGCTGGGCT  50

seq1  CTGCTCCATCAATCATTAGTTAAGAAAATACCCTCTGGTCAGGCATGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCATCAATCATTAGTTAAGAAAATACCCTCTGGTCAGGCATGGTG  100

seq1  GCACATGTCTTTAATCGGGGCTCATAGGAGACAGGAGGCACTCTGTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGTCTTTAATCGGGGCTCATAGGAGACAGGAGGCACTCTGTGAGT  150

seq1  TCAAGGCTGACCTGGTCTAAAAAGTGAGTTCTAGAACAGCCAGGCTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCTGACCTGGTCTAAAAAGTGAGTTCTAGAACAGCCAGGCTGTTA  200

seq1  CATAGAGGAACCCTGTTTCAAGAAACAAAACAAAAGGGAGGAAAGGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGGAACCCTGTTTCAAGAAACAAAACAAAAGGGAGGAAAGGAAGG  250

seq1  AGATAGGGAGGGAGGTTGAGAGACAGGGACAGAGAGAGAGAGAGAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGGAGGGAGGTTGAGAGACAGGGACAGAGAGAGAGAGAGAGAGAG  300

seq1  AGAGAGAGAGAGAGAGA  317
      |||||||||||||||||
seq2  AGAGAGAGAGAGAGAGA  317

seq1: chr12_19102599_19103359
seq2: B6Ng01-127L16.g_142_901 (reverse)

seq1  GGACCCCCATCCCCGACCCCATACACCAGGTCATTCCTCTGCCCACTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGACCCCCATCCCCGACCCCATACACCAGGTCATTCCTCTGCCCAATTGC  50

seq1  TACCTGGTGTACTAAAGGACTGCCTGTCTTTGCAGAGAGTAATGATAAAA  100
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TACCTGGTGTACTAAAGGACTGCCTGTCTTTGCAGAGAGTAATGAT-AAA  99

seq1  GCCAAGCATCTATCGATTGCTTGCTGGACATCAGGCCCCAGCTGAGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCATCTATCGATTGCTTGCTGGACATCAGGCCCCAGCTGAGCTCA  149

seq1  TCCATCAGGTTTATTTACACAATTCTATAAAACATGTCTTTTTTTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAGGTTTATTTACACAATTCTATAAAACATGTCTTTTTTTTTTTA  199

seq1  AACAAAACAAGACAAAACAAAACAAAACAAAAAAACCTCTAATGAGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAGACAAAACAAAACAAAACAAAAAAACCTCTAATGAGATCT  249

seq1  GAGGCTCAGATATGTGATTAAGAATTGTCAAAGCAAGAACTGGGAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCAGATATGTGATTAAGAATTGTCAAAGCAAGAACTGGGAAAATG  299

seq1  GCTCAGTGGGGAAGAACACATGATACCCAGCATGAGGACCTGAGTTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTGGGGAAGAACACATGATACCCAGCATGAGGACCTGAGTTCTGA  349

seq1  TCCCAACACCCACGGAATAGTCAGAAGTGGCTGAGCATGCCCGAAACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACACCCACGGAATAGTCAGAAGTGGCTGAGCATGCCCGAAACCCT  399

seq1  AGAACTAGGGGACAAGTGAGTCCCAGAAGCTTGCTGAGCAGGCAGCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAGGGGACAAGTGAGTCCCAGAAGCTTGCTGAGCAGGCAGCCTAG  449

seq1  CTAAAATGGTAGGCCCCAGCCGGGTTCAGTGAGAGAGAAAAGGGAATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATGGTAGGCCCCAGCCGGGTTCAGTGAGAGAGAAAAGGGAATACT  499

seq1  GTGAACACCAGTATTCCTGTTTGGCCTCTGCCCAGGTGGGTGTTCATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACACCAGTATTCCTGTTTGGCCTCTGCCCAGGTGGGTGTTCATCTG  549

seq1  CACACACATGTACAACATACACACACATAGCTGTCTATAGGACTTCCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATGTACAACATACACACACATAGCTGTCTATAGGACTTCCTAT  599

seq1  AGAAATCAGAACGACACAGTAAAGGATGAGTCAGCAGTCAGTTCTTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAGAACGACACAGTAAAGGATGAGTCAGCAGTCAGTTCTTCACA  649

seq1  GGAGCAATGCTTATGTGCACCCTGCATCCTTCCCGCTCCATGCTCTAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAATGCTTATGTGCACCCTGCATCCTTCCCGCTCCATGCTCTAAAC  699

seq1  CATCTCTGTATTTGGTCCAGTGATCTGACTCTGTGGGGAAAGGTGCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGTATTTGGTCCAGTGATCTGACTCTGTGGGGAAAGGTGCTTGC  749

seq1  TTCCAAGCCTA  761
      |||||||||||
seq2  TTCCAAGCCTA  760