BAC Information

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BAC

Clone NameB6Ng01-127P21
Chromosome12 (Build37)Y (Build37)
Map Location 44,290,536 - 44,291,1461,870,361 - 1,870,579
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039059, ENSMUSG00000066507, LOC100039081
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127P21.bB6Ng01-127P21.g
ACCDH929960DH929961
length1,015247
definitionDH929960|Mus musculus domesticus DNA, BAC clone: B6Ng01-127P21, 5' end.DH929961|Mus musculus domesticus DNA, BAC clone: B6Ng01-127P21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(44,290,536 - 44,291,146)(1,870,361 - 1,870,579)
sequence
gaattctggagactcatttgtatctatattgccctttcctcctcagtgcg
ggagttacagatatgtgaaatttgccacatagatacaatgagtcacattt
tgagttattcgatttatttttacaatctgttttaagtacagaaaaactga
ttagaaaaacagacttgttattatattctctagacatatatgaacagcct
ttccaaatgacattatccccactcagcagtacatgctgtatactaatgaa
cttccactgaaacatcaattgctggggacctgccccagtctttggaggta
ctgaggtagaacacagtgttgggtgaagaccggaggctgttgatctcttg
taattcactcttactgttctgagagccagaagctgatggccactgggaat
ttaattctctcttgctattctgtggctaaaatccattggtttctggcaac
ttgactcccagtgttagccacaggagattaggggaagtcagttacttggc
acttttctttcagactcaaggacctatcactgaccaggtaagaggcttag
agtttatgatctctttgtgaatcagagagcaaagaaaagaaaagaataaa
gaaaacacgaacagagaccacatactggatgaagctgaagaatgttgcac
cattgttttattgtggttcttagcttttatacttgctctaaaacattacc
tcatacagctgtcaggtagagccattataggaatataattagctacatga
ttttctaaatgtttttacattccaacaagttcatattaaatttaaagaat
aattcatgttataaatcactaagggtttaggaattataacagaattgttt
acatgtctttccactaaatgtagtatctgactaaatattcattatctgtt
aatagcccctcccctcacatataagttcattattaagtttaaagtagtaa
ttttatgtcacaagttagcataattttgccagaacacaaatcatttgcct
tgtgtcttattattt
agtaagaatgttgccttttaagtgacattaaggagctaaagagatctgca
accctgtaggtacaacaacattatgaactaaccagtaccccggagctctt
gactctagctgcatatgtatcaaaagatggcttaattggccatcactgga
aagagaggcccattggacacgaaaactttatatgccccagtacaggggaa
tgccagggccaaaaaatgggaaagggtgggtagggaagtggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_44290536_44291146
seq2: B6Ng01-127P21.b_48_658 (reverse)

seq1  TTCGTGTTTTCTTTATTCTTTTCTTTTCTTTGCTCTCTGATTCACAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGTTTTCTTTATTCTTTTCTTTTCTTTGCTCTCTGATTCACAAAGA  50

seq1  GATCATAAACTCTAAGCCTCTTACCTGGTCAGTGATAGGTCCTTGAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATAAACTCTAAGCCTCTTACCTGGTCAGTGATAGGTCCTTGAGTCT  100

seq1  GAAAGAAAAGTGCCAAGTAACTGACTTCCCCTAATCTCCTGTGGCTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAGTGCCAAGTAACTGACTTCCCCTAATCTCCTGTGGCTAACA  150

seq1  CTGGGAGTCAAGTTGCCAGAAACCAATGGATTTTAGCCACAGAATAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGTCAAGTTGCCAGAAACCAATGGATTTTAGCCACAGAATAGCAA  200

seq1  GAGAGAATTAAATTCCCAGTGGCCATCAGCTTCTGGCTCTCAGAACAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAATTAAATTCCCAGTGGCCATCAGCTTCTGGCTCTCAGAACAGTA  250

seq1  AGAGTGAATTACAAGAGATCAACAGCCTCCGGTCTTCACCCAACACTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAATTACAAGAGATCAACAGCCTCCGGTCTTCACCCAACACTGTG  300

seq1  TTCTACCTCAGTACCTCCAAAGACTGGGGCAGGTCCCCAGCAATTGATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTCAGTACCTCCAAAGACTGGGGCAGGTCCCCAGCAATTGATGT  350

seq1  TTCAGTGGAAGTTCATTAGTATACAGCATGTACTGCTGAGTGGGGATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGGAAGTTCATTAGTATACAGCATGTACTGCTGAGTGGGGATAAT  400

seq1  GTCATTTGGAAAGGCTGTTCATATATGTCTAGAGAATATAATAACAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGGAAAGGCTGTTCATATATGTCTAGAGAATATAATAACAAGTC  450

seq1  TGTTTTTCTAATCAGTTTTTCTGTACTTAAAACAGATTGTAAAAATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTAATCAGTTTTTCTGTACTTAAAACAGATTGTAAAAATAAAT  500

seq1  CGAATAACTCAAAATGTGACTCATTGTATCTATGTGGCAAATTTCACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATAACTCAAAATGTGACTCATTGTATCTATGTGGCAAATTTCACATA  550

seq1  TCTGTAACTCCCGCACTGAGGAGGAAAGGGCAATATAGATACAAATGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAACTCCCGCACTGAGGAGGAAAGGGCAATATAGATACAAATGAGT  600

seq1  CTCCAGAATTC  611
      |||||||||||
seq2  CTCCAGAATTC  611

seq1: chrY_1870361_1870579
seq2: B6Ng01-127P21.g_103_320

seq1  AAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACT  50
      |||||||||||| ||||||||||||| |||||  ||||||||||||||||
seq2  AAGGAGCTAAAGAGATCTGCAACCCTGTAGGTACAACAACATTATGAACT  50

seq1  AACCATTACCCCTGAGCTCTTGACTCTTGCTGCATAGGTATCAAAAGATG  100
      ||||| |||||| |||||||||||||| |||||||| |||||||||||||
seq2  AACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATG  100

seq1  GCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTT  150
      || || | |||||||||||||||||||||||||||||||| | |||||||
seq2  GCTTAATTGGCCATCACTGGAAAGAGAGGCCCATTGGACACGAAAACTTT  150

seq1  ATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGCAGTGGGTGG  200
      ||||||||||||||||||||| ||||||||||||||  || |  ||||||
seq2  ATATGCCCCAGTACAGGGGAATGCCAGGGCCAAAAAATGGGAAAGGGTGG  200

seq1  GTAGGGGAGTGGGGGTGGG  219
      |||||| ||| ||||||||
seq2  GTAGGGAAGT-GGGGTGGG  218