BAC Information

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BAC

Clone NameB6Ng01-129O05
Chromosome12 (Build37)
Map Location 34,615,822 - 34,616,803
singlet/doubletsinglet
Overlap genenone
Upstream geneSypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb, LOC668801, LOC668806, Ferd3l
Downstream geneTwist1, Hdac9, 4921508M14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129O05.bB6Ng01-129O05.g
ACCDH931356DH931357
length9821,154
definitionDH931356|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O05, 5' end.DH931357|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatggaatagtagctaaatagatggaattccattactgtatctt
cctgccatcctatgtatcacaacataatctcattcctttacagatggcta
gctcaggcatttcctttaaaaaaagattatattgcaaacagggctcttag
aaatgtcttctctgttacaaccacctgatgttagactacagtccttattg
gtgcgaatttaggaaaacaaatgtccagaactcctatctgggcgctgtca
gatcacttcccatctcaaccacactgcaggagcctgcacctcctgtctca
gcacctgctatcaacaccaagacagaatatttccacccaccccccaaagg
atactgtcattcttttattagcacatttatttctctttgattctcatgtg
ggttaaaaacacatctagcaaaagcttactacacatttctgagattgtta
ttaagactaaagtgtttttaagcacatatataaaccaaagcacaaagcca
tacaaaactatgaaatgtaatgaaccaatggattcattttacatttgaga
cacatactggcatcattgggagctatatgccagaagccagtcttaaaaga
tctccctgttgctatacgaatagaatggaaaatggtcttccatatattct
gagtatataggtcagtaagtcacaagtactttaatattattctactttag
gacatactaatttttcattgatagcttcttgtcattgtgttttaacgcat
tacttatttcttacttaagtatattggaaaagttatcttctgggcattca
agagtgactgactaatgcttgaaaggcaagaaatctagacagaaattaat
tcacattaagaattaagtctcattgcatctttgcatcgataatagagagc
tgccatgacttttgaatgtccatctgcctccaaagaacagtgaattagaa
gttctatgacatgggggtgggtgggatatggg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtgtagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttctgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttgggtgaatttgcttccttttttctagagct
tttagatgtgtgtcaagctgctagtatgtgctctctcccgttttctgaag
gcactcatagctatgagtttccctcttagaaatgcttcatgggtcccaaa
gttgggtacgttgtggccttcattcattaactcttaaaagcttttaattt
ctttctttatgcctctgacaagatatcaatgaagagaggtgtgttagtcc
atggaatgtgactcctgtattatgttgtattgagaacccatgcgcggggg
actg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_34615822_34616803
seq2: B6Ng01-129O05.b_52_1033

seq1  GAATTCTATGGAATAGTAGCTAAATAGATGGAATTCCATTACTGTATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGGAATAGTAGCTAAATAGATGGAATTCCATTACTGTATCTT  50

seq1  CCTGCCATCCTATGTATCACAACATAATCTCATTCCTTTACAGATGGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCATCCTATGTATCACAACATAATCTCATTCCTTTACAGATGGCTA  100

seq1  GCTCAGGCATTTCCTTTAAAAAAAGATTATATTGCAAACAGGGCTCTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGCATTTCCTTTAAAAAAAGATTATATTGCAAACAGGGCTCTTAG  150

seq1  AAATGTCTTCTCTGTTACAACCACCTGATGTTAGACTACAGTCCTTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTTCTCTGTTACAACCACCTGATGTTAGACTACAGTCCTTATTG  200

seq1  GTGCGAATTTAGGAAAACAAATGTCCAGAACTCCTATCTGGGCGCTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGAATTTAGGAAAACAAATGTCCAGAACTCCTATCTGGGCGCTGTCA  250

seq1  GATCACTTCCCATCTCAACCACACTGCAGGAGCCTGCACCTCCTGTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTCCCATCTCAACCACACTGCAGGAGCCTGCACCTCCTGTCTCA  300

seq1  GCACCTGCTATCAACACCAAGACAGAATATTTCCACCCACCCCCCAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCTATCAACACCAAGACAGAATATTTCCACCCACCCCCCAAAGG  350

seq1  ATACTGTCATTCTTTTATTAGCACATTTATTTCTCTTTGATTCTCATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTCATTCTTTTATTAGCACATTTATTTCTCTTTGATTCTCATGTG  400

seq1  GGTTAAAAACACATCTAGCAAAAGCTTACTACACATTTCTGAGATTGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAAACACATCTAGCAAAAGCTTACTACACATTTCTGAGATTGTTA  450

seq1  TTAAGACTAAAGTGTTTTTAAGCACATATATAAACCAAAGCACAAAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACTAAAGTGTTTTTAAGCACATATATAAACCAAAGCACAAAGCCA  500

seq1  TACAAAACTATGAAATGTAATGAACCAATGGATTCATTTTACATTTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACTATGAAATGTAATGAACCAATGGATTCATTTTACATTTGAGA  550

seq1  CACATACTGGCATCATTGGGAGCTATATGCCAGAAGCCAGTCTTAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTGGCATCATTGGGAGCTATATGCCAGAAGCCAGTCTTAAAAGA  600

seq1  TCTCCCTGTTGCTATACGAATAGAATGGAAAATGGTCTTCCATATATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGTTGCTATACGAATAGAATGGAAAATGGTCTTCCATATATTCT  650

seq1  GAGTATATAGGTCAGTAAGTCACAAGTACTTTAATATTATTCTACTTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATATAGGTCAGTAAGTCACAAGTACTTTAATATTATTCTACTTTAG  700

seq1  GACATACTAATTTTTCATTGATAGCTTCTTGTCATTGTGTTTTAACGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACTAATTTTTCATTGATAGCTTCTTGTCATTGTGTTTTAACGCAT  750

seq1  TACTTATTTCTTACTTAAGTATATTGGAAAAGTTATCTTCTGGGCATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATTTCTTACTTAAGTATATTGGAAAAGTTATCTTCTGGGCATTCA  800

seq1  AGAGTGACTGACTAATGCTTGAAAGGCAAGAAATCTAGACAGAAATTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGACTGACTAATGCTTGAAAGGCAAGAAATCTAGACAGAAATTAAT  850

seq1  TCACATTAAGAATTAAGTCTCATTGCATCTTTGCATCGATAATAGAGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTAAGAATTAAGTCTCATTGCATCTTTGCATCGATAATAGAGAGC  900

seq1  TGCCATGACTTTTGAATGTCCAATCTGCCTCCAAAGAACAGTGAATTAGA  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGCCATGACTTTTGAATGTCC-ATCTGCCTCCAAAGAACAGTGAATTAGA  949

seq1  AGTTCTATGACATGGGGGTGGGT-GGATATGGG  982
      ||||||||||||||||||||||| |||||||||
seq2  AGTTCTATGACATGGGGGTGGGTGGGATATGGG  982