BAC Information

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BAC

Clone NameB6Ng01-131C22
Chromosome12 (Build37)
Map Location 120,291,664 - 120,454,975
singlet/doubletdoublet
Overlap geneItgb8
Upstream geneDnahc11, Sp4, LOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5
Downstream geneEG627557, LOC100043011, 4732474O15Rik, LOC668632, LOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131C22.bB6Ng01-131C22.g
ACCDH932305DH932306
length1,168769
definitionDH932305|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C22, 5' end.DH932306|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,291,664 - 120,292,838)(120,454,207 - 120,454,975)
sequence
gaattcttcttgtggtgctgtagactgaacccagggacttgtggatgaca
gagagctatccaaccatagcactacatcctcatccctgaagtattcatat
aataattccaaaattaataatatagtacaattttatagcaaagcatggaa
cttataaacaactgaagttcattatcatatccacatcacaattacttact
ttctcacaatttttcaagtaatctcaaagatcacatgatcccctattgaa
aacaggaattctgaaagatgaattctttttgcactaatagtcaaatctaa
gatgattatcaataaaagtggatggcttctttttccaaaaatctacaaca
gaagttgccgtgaaacacagaagaaacacatacaatcatatacacaatac
attgaaaatgaaatttgaggtggagttaattacagcacatgacagatgac
tgtagtcacctgtaataatcgattcactttgtttatttcttccattactt
gacacttgtgttgtctttcaatggctttcctgtgcttttctacttcactg
cactctactatgttctggaccatatgggttttgaggctgagtactatctc
ttcatgctgctgtattttgtgctctagcatctcacacttctcctgggctg
ctgccatctctgctaacttctgctgcagggcattattttcatcgttcagg
catttccagtgggattgtggttgttgtagttttgtttcgatacatgtctt
taagccagcactggggaagcagagacaggcttcctggccagtgaagctgg
ccaaagtatcagggctccaggctcagtgagatatcctgtctccaaaaact
taggtggacagtgatggagaaaagatggatgagcatacacttcaacatgc
acaaacatacaaacacacgcacatacatgcacacacacattcatatacat
aaatacacatacccataggaaagagacattaaagagatagaaagagagat
agcagaaattctgttaaaggttaatcctaggagcttgggatatagctagc
tggtataatgcttgcttgtctaataataaaggcctgggtcatacatacat
tatagtcccagcactagggttggggcaggaggaccaggacctgaaataat
aatggtacatagagagct
gaattcttttgaaacaaatttaattttcaaaataaattgtattttcaaaa
gactttcaaaataaaagttgtattttcaaaataaataatgtcactagggt
atatttgttttcatgaatttggagagtcatgtgcttcatgcagatgtgga
ttaagaagcaaacatgttgccttttaaaataaatgtttggtaaatgaaga
ctattttaaaatgtaagtattcaagagctgttataaaccccaggaattaa
atttccaaattaagcttcacatagaattctgtttattcactgcacactga
ataaatgcattcattatgcatgacccgggtaccagggatataaagaaaat
acattataggtatacaagagagttcagaggattagtacaattgctacaac
ctgagttggatctctggaacctatgtaaaggtagaaggatagagtcagct
ctgcaaagtaggcttgtgacatgtacaaaattatgctcatcatcaaggta
caggcatatatacatatcacatacacatgaaataatgataaataataaca
ataaattaattaaattaatcttttaataaaaaataaaataagtttaaaga
gtctagtcattttctccaaggcaacgcaaacaaaatgtgtgtgtgagtgg
ggtgggggagtctttacttcttgcttgtgagagaaagtgacataattctg
cttatattatggacttgatatcttgtcacactcactaatttttataacct
ctcagataaaaattgtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120291664_120292838
seq2: B6Ng01-131C22.b_48_1215

seq1  GAATTCTTCTTGTGGTGCTGTAGACTGAACCCAGGGACTTGTGGATGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGTGGTGCTGTAGACTGAACCCAGGGACTTGTGGATGACA  50

seq1  GAGAGCTATCCAACCATAGCACTACATCCTCATCCCTGAAGTATTCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTATCCAACCATAGCACTACATCCTCATCCCTGAAGTATTCATAT  100

seq1  AATAATTCCAAAATTAATAATATAGTACAATTTTATAGCAAAGCATGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTCCAAAATTAATAATATAGTACAATTTTATAGCAAAGCATGGAA  150

seq1  CTTATAAACAACTGAAGTTCATTATCATATCCACATCACAATTACTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAACAACTGAAGTTCATTATCATATCCACATCACAATTACTTACT  200

seq1  TTCTCACAATTTTTCAAGTAATCTCAAAGATCACATGATCCCCTATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAATTTTTCAAGTAATCTCAAAGATCACATGATCCCCTATTGAA  250

seq1  AACAGGAATTCTGAAAGATGAATTCTTTTTGCACTAATAGTCAAATCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAATTCTGAAAGATGAATTCTTTTTGCACTAATAGTCAAATCTAA  300

seq1  GATGATTATCAATAAAAGTGGATGGCTTCTTTTTCCAAAAATCTACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTATCAATAAAAGTGGATGGCTTCTTTTTCCAAAAATCTACAACA  350

seq1  GAAGTTGCCGTGAAACACAGAAGAAACACATACAATCATATACACAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGCCGTGAAACACAGAAGAAACACATACAATCATATACACAATAC  400

seq1  ATTGAAAATGAAATTTGAGGTGGAGTTAATTACAGCACATGACAGATGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATGAAATTTGAGGTGGAGTTAATTACAGCACATGACAGATGAC  450

seq1  TGTAGTCACCTGTAATAATCGATTCACTTTGTTTATTTCTTCCATTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCACCTGTAATAATCGATTCACTTTGTTTATTTCTTCCATTACTT  500

seq1  GACACTTGTGTTGTCTTTCAATGGCTTTCCTGTGCTTTTCTACTTCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTGTGTTGTCTTTCAATGGCTTTCCTGTGCTTTTCTACTTCACTG  550

seq1  CACTCTACTATGTTCTGGACCATATGGGTTTTGAGGCTGAGTACTATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTACTATGTTCTGGACCATATGGGTTTTGAGGCTGAGTACTATCTC  600

seq1  TTCATGCTGCTGTATTTTGTGCTCTAGCATCTCACACTTCTCCTGGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCTGCTGTATTTTGTGCTCTAGCATCTCACACTTCTCCTGGGCTG  650

seq1  CTGCCATCTCTGCTAACTTCTGCTGCAGGGCATTATTTTCATCGTTCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATCTCTGCTAACTTCTGCTGCAGGGCATTATTTTCATCGTTCAGG  700

seq1  CATTTCCAGTGGGATTGTGGTTGTTGTAGTTTTGTTTCGATACATGTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCAGTGGGATTGTGGTTGTTGTAGTTTTGTTTCGATACATGTCTT  750

seq1  TAAGCCAGCACTGGGGAAGCAGAGACAGGCTTCCTGGCCAGTGAAGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCAGCACTGGGGAAGCAGAGACAGGCTTCCTGGCCAGTGAAGCTGG  800

seq1  CCAAAGTATCA-GGCTCCAGGCTCAGTGAGATATCCTGTCTCCAAAAACT  849
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTATCAGGGCTCCAGGCTCAGTGAGATATCCTGTCTCCAAAAACT  850

seq1  TAGGTGGACAGTGATGGAGAAAAGATGGATGAGCATACACTTCAACATGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGACAGTGATGGAGAAAAGATGGATGAGCATACACTTCAACATGC  900

seq1  ACAAACATACAAACACACGCACATACATGCACACACACATTCATATACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATACAAACACACGCACATACATGCACACACACATTCATATACAT  950

seq1  AAATACACATACCCATAGGAAAGAGACATTAAAGAGATAGAAAAGAGAGA  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAATACACATACCCATAGGAAAGAGACATTAAAGAGATAG-AAAGAGAGA  999

seq1  TAAGCAGAAATTCTGTTAAAGGTTAATCCTAGGAGCTTGGGATATAGCTT  1049
      | |||||||||||||||||||||||||||||||||||||||||||||| |
seq2  T-AGCAGAAATTCTGTTAAAGGTTAATCCTAGGAGCTTGGGATATAGC-T  1047

seq1  AGCTGGTATAATGCTTGCTTGCCT-ATAATAAAAGGCCCTGGGTTCAATA  1098
      ||||||||||||||||||||| || ||||||||  | |||||||   |||
seq2  AGCTGGTATAATGCTTGCTTGTCTAATAATAAA--GGCCTGGGT--CATA  1093

seq1  CATACA-TATAGTCCCAGCACTAGGGTGTTGGGGGCAGGAGGAGCAGGAC  1147
      |||||| |||||||||||||||||||   | |||||||||||| ||||||
seq2  CATACATTATAGTCCCAGCACTAGGG---TTGGGGCAGGAGGACCAGGAC  1140

seq1  CTG-AATATTATTGGTAACATAGAGAGCT  1175
      ||| |||| || |||| ||||||||||||
seq2  CTGAAATAATAATGGT-ACATAGAGAGCT  1168

seq1: chr12_120454207_120454975
seq2: B6Ng01-131C22.g_67_835 (reverse)

seq1  AACA-AATTTTTATCTGAGAGTTTAAAAAAATTAGTGAGAGAGACAAAAT  49
      |||| |||||||||||||||| ||| ||||||||||||| | ||||| ||
seq2  AACACAATTTTTATCTGAGAGGTTATAAAAATTAGTGAGTGTGACAAGAT  50

seq1  ATTCAAGTACATGGTTTTAGAAGAATTATGACACTTTCTCTCACAAGCAT  99
      | |||||| |||  | | || ||||||||| |||||||||||||||||| 
seq2  A-TCAAGTCCATAATATAAGCAGAATTATGTCACTTTCTCTCACAAGCAA  99

seq1  GAAGTAAAGACTCCCCCACCCCACTCACACACACATTTTGTTTGCGTTGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAAGACTCCCCCACCCCACTCACACACACATTTTGTTTGCGTTGC  149

seq1  CTTGGAGAAAATGACTAGACTCTTTAAACTTATTTTATTTTTTATTAAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGAAAATGACTAGACTCTTTAAACTTATTTTATTTTTTATTAAAA  199

seq1  GATTAATTTAATTAATTTATTGTTATTATTTATCATTATTTCATGTGTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATTTAATTAATTTATTGTTATTATTTATCATTATTTCATGTGTAT  249

seq1  GTGATATGTATATATGCCTGTACCTTGATGATGAGCATAATTTTGTACAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATGTATATATGCCTGTACCTTGATGATGAGCATAATTTTGTACAT  299

seq1  GTCACAAGCCTACTTTGCAGAGCTGACTCTATCCTTCTACCTTTACATAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAGCCTACTTTGCAGAGCTGACTCTATCCTTCTACCTTTACATAG  349

seq1  GTTCCAGAGATCCAACTCAGGTTGTAGCAATTGTACTAATCCTCTGAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGAGATCCAACTCAGGTTGTAGCAATTGTACTAATCCTCTGAACT  399

seq1  CTCTTGTATACCTATAATGTATTTTCTTTATATCCCTGGTACCCGGGTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTATACCTATAATGTATTTTCTTTATATCCCTGGTACCCGGGTCA  449

seq1  TGCATAATGAATGCATTTATTCAGTGTGCAGTGAATAAACAGAATTCTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATGAATGCATTTATTCAGTGTGCAGTGAATAAACAGAATTCTAT  499

seq1  GTGAAGCTTAATTTGGAAATTTAATTCCTGGGGTTTATAACAGCTCTTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGCTTAATTTGGAAATTTAATTCCTGGGGTTTATAACAGCTCTTGA  549

seq1  ATACTTACATTTTAAAATAGTCTTCATTTACCAAACATTTATTTTAAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTACATTTTAAAATAGTCTTCATTTACCAAACATTTATTTTAAAAG  599

seq1  GCAACATGTTTGCTTCTTAATCCACATCTGCATGAAGCACATGACTCTCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATGTTTGCTTCTTAATCCACATCTGCATGAAGCACATGACTCTCC  649

seq1  AAATTCATGAAAACAAATATACCCTAGTGACATTATTTATTTTGAAAATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATGAAAACAAATATACCCTAGTGACATTATTTATTTTGAAAATA  699

seq1  CAACTTTTATTTTGAAAGTCTTTTGAAAATACAATTTATTTTGAAAATTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTTATTTTGAAAGTCTTTTGAAAATACAATTTATTTTGAAAATTA  749

seq1  AATTTGTTTCAAAAGAATTC  769
      ||||||||||||||||||||
seq2  AATTTGTTTCAAAAGAATTC  769