BAC Information

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BAC

Clone NameB6Ng01-132H12
Chromosome12 (Build37)
Map Location 110,549,750 - 110,700,723
singlet/doubletdoublet
Overlap geneDlk1
Upstream gene1600002O04Rik, Cyp46a1, Eml1, Evl, Degs2, LOC668164, Yy1, Slc25a29, AI132487, Wars, Wdr25, BM948371, LOC668194
Downstream geneGtl2, Rtl1, 6430411K18Rik, B830012L14Rik, LOC100040715, LOC100040724, LOC675987, LOC100041509, LOC100040746, 3110009F21Rik, Dio3as, Dio3, EG629595, EG668245, LOC100040799
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132H12.bB6Ng01-132H12.g
ACCDH933264DH933265
length750298
definitionDH933264|Mus musculus domesticus DNA, BAC clone: B6Ng01-132H12, 5' end.DH933265|Mus musculus domesticus DNA, BAC clone: B6Ng01-132H12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,549,750 - 110,550,499)(110,700,426 - 110,700,723)
sequence
gaattcaagaggcagagaggcaggcagatctctgaatttgaggctagcct
ggcctatagagctacagagcttgcccaagaggtagccttttcctacgaga
ccagttgcatcagcctttgtgtgtctacacggtgtttttaaaacagaaga
tcccaccagtggcattcccgtttaaggttttctcctgaaacgggaattta
tactttcataatagacctcagatagccaaagcattccggagcaaaaagaa
gaacactgaaaaaattaacattccaaatttggggatatattatagagcta
tagtaataaaaacagtcttgtagtggtgccaaaacagtcttgtagaccag
tggaacaaaacagaagtcccaaatttcaatacacataataacagccacag
gaggcaaaaaataagagcatattcgatagtgttttccacactgtactgat
tttttttaagtactgaaaggttatggagtattgtgacaagtttccagaga
gctattgaggccagaaactgttggtagggtcagaatcatttaaaagaggt
cccaaaagaacactgaatgaaactgtgaaggtgaagtataagttgaaatg
gaggcttcaagagattagaggtaccaaaatcataagatgcctaccaaggg
aagcttcagatacaaactagagttggcccaagggaagctatgtgtgttag
aggtacatcagagagctctctctctctctctctctctctctctctctctc

caaattgggaaaccgaggagcagaattattcgcagactcggtcaaggtct
cacgctgagaggccaggaagggtatcagaaaccctcctggcatatgtcaa
tactttttttttaaatttttttcgattttatttcttaaaatgaactcaaa
atgagatgggataatgaggtgattgtgatggggctggtttgcctcagggc
gggactgattgaggcaggggaggggcctggagggagggagggagggaacc
aggggaagaggggctaggaggcagggacatgggaggtggtggagattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_110549750_110550499
seq2: B6Ng01-132H12.b_45_794

seq1  GAATTCAAGAGGCAGAGAGGCAGGCAGATCTCTGAATTTGAGGCTAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGGCAGAGAGGCAGGCAGATCTCTGAATTTGAGGCTAGCCT  50

seq1  GGCCTATAGAGCTACAGAGCTTGCCCAAGAGGTAGCCTTTTCCTACGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTATAGAGCTACAGAGCTTGCCCAAGAGGTAGCCTTTTCCTACGAGA  100

seq1  CCAGTTGCATCAGCCTTTGTGTGTCTACACGGTGTTTTTAAAACAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCATCAGCCTTTGTGTGTCTACACGGTGTTTTTAAAACAGAAGA  150

seq1  TCCCACCAGTGGCATTCCCGTTTAAGGTTTTCTCCTGAAACGGGAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCAGTGGCATTCCCGTTTAAGGTTTTCTCCTGAAACGGGAATTTA  200

seq1  TACTTTCATAATAGACCTCAGATAGCCAAAGCATTCCGGAGCAAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCATAATAGACCTCAGATAGCCAAAGCATTCCGGAGCAAAAAGAA  250

seq1  GAACACTGAAAAAATTAACATTCCAAATTTGGGGATATATTATAGAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGAAAAAATTAACATTCCAAATTTGGGGATATATTATAGAGCTA  300

seq1  TAGTAATAAAAACAGTCTTGTAGTGGTGCCAAAACAGTCTTGTAGACCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATAAAAACAGTCTTGTAGTGGTGCCAAAACAGTCTTGTAGACCAG  350

seq1  TGGAACAAAACAGAAGTCCCAAATTTCAATACACATAATAACAGCCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAAAACAGAAGTCCCAAATTTCAATACACATAATAACAGCCACAG  400

seq1  GAGGCAAAAAATAAGAGCATATTCGATAGTGTTTTCCACACTGTACTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAAAAATAAGAGCATATTCGATAGTGTTTTCCACACTGTACTGAT  450

seq1  TTTTTTTAAGTACTGAAAGGTTATGGAGTATTGTGACAAGTTTCCAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAGTACTGAAAGGTTATGGAGTATTGTGACAAGTTTCCAGAGA  500

seq1  GCTATTGAGGCCAGAAACTGTTGGTAGGGTCAGAATCATTTAAAAGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGAGGCCAGAAACTGTTGGTAGGGTCAGAATCATTTAAAAGAGGT  550

seq1  CCCAAAAGAACACTGAATGAAACTGTGAAGGTGAAGTATAAGTTGAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAGAACACTGAATGAAACTGTGAAGGTGAAGTATAAGTTGAAATG  600

seq1  GAGGCTTCAAGAGATTAGAGGTACCAAAATCATAAGATGCCTACCAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTCAAGAGATTAGAGGTACCAAAATCATAAGATGCCTACCAAGGG  650

seq1  AAGCTTCAGATACAAACTAGAGTTGGCCCAAGGGAAGCTATGTGTGTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCAGATACAAACTAGAGTTGGCCCAAGGGAAGCTATGTGTGTTAG  700

seq1  AGGTACATCAGAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACATCAGAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  750

seq1: chr12_110700426_110700723
seq2: B6Ng01-132H12.g_76_373 (reverse)

seq1  AAATCTCCACCACCTCCCATGTCCCTGCCTCCTAGCCCCTCTTCCCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCCACCACCTCCCATGTCCCTGCCTCCTAGCCCCTCTTCCCCTGG  50

seq1  TTCCCTCCCTCCCTCCCTCCAGGCCCCTCCCCTGCCTCAATCAGTCCCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCCTCCCTCCCTCCAGGCCCCTCCCCTGCCTCAATCAGTCCCGC  100

seq1  CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGCAAACCAGCCCCATCACAATCACCTCATTATCCCATCTCATTT  150

seq1  TGAGTTCATTTTAAGAAATAAAATCGAAAAAAATTTAAAAAAAAAGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCATTTTAAGAAATAAAATCGAAAAAAATTTAAAAAAAAAGTATT  200

seq1  GACATATGCCAGGAGGGTTTCTGATACCCTTCCTGGCCTCTCAGCGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATGCCAGGAGGGTTTCTGATACCCTTCCTGGCCTCTCAGCGTGAG  250

seq1  ACCTTGACCGAGTCTGCGAATAATTCTGCTCCTCGGTTTCCCAATTTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGACCGAGTCTGCGAATAATTCTGCTCCTCGGTTTCCCAATTTG  298