BAC Information

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BAC

Clone NameB6Ng01-136E09
Chromosome12 (Build37)
Map Location 46,703,706 - 46,704,827
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620025, Stxbp6
Downstream geneLOC664952
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136E09.bB6Ng01-136E09.g
ACCDH936090DH936091
length1,1731,127
definitionDH936090|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E09, 5' end.DH936091|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaaaggctgagaagcacctgaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaaaaaccctgagatt
cctcctcacaccagtcagtatggctaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaatactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaattagtgtggtggttcctcag
aaaattggacatagtactacaggaggatcccacaatacctctcctgggca
tacatccagaagatgttcctaccggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
aatactactcagctatttaaaaaaatgaatttatgaaattcctaggcaaa
tagatggacctggagggcataatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgatatgtactcgctgataagtgcatattagcccagaaact
tagaatacccaagatataagatacaatttgctaaatacacggaactcagg
aagaatgaagaccaaaatgtggacactttgccccttcttataattgggaa
caaaatacccatggaaggagttacagagacaaagtttggagatgagacaa
aaggatggaccatctagagtctgccatttcctcagatccatctcataatc
agcttccaaacgctgataccattgcatacactagcaagattttgctgaaa
ggacccagatagagctgtctcttgtgagcctatactgggacctagcaaca
cagaagtggatgctcacatcagctatttggatggatcacagggtcccaat
ggaggagctagagaagtacccaaggagctaaagaaatctgcaaccctata
ggtggaacatccatatgaactaaccattaccttggagtcttgactctagc
tgctatgtacagaagaaggcctaatggccttcatgcaaagaagtcaaatt
gtcttgcaacttaattaatcctcagacacgtgtactacagggccacgata
ttggaggtggtgggtgggtgaat
gaattcctaactatggccctaagcctatctccccagggctgctcacctgt
gcatcatatcctagttgaagatcaggtctggtctctaacagaagtctcta
atttgaaggttagaatcatgaaggagactccccagccacagagtaaatcg
aggtggtgtctctccagatgtgcagagcactgtcttaagtctctgcttac
atactgtccagtggagtcatggggttctacgactgagtgatatcaatgct
ttctggttatcaggtgcagccttgggtatattgaggatccagactaagct
gttttttacatgtctaaaaagcatttttttttttactatgctcaatacaa
gcttagactggccttgaagcattgatcttcctgcctcagcatccaaagtt
ctgggaatacaggtattaaccactactggttaaatattcttaattttatg
tcccatttttgttgaacactacattaacatttctcttcctatcaacattt
cttgaaaaaaaacccccttttttttttcactttataattgtttttcaaac
aaaggtgggcttctgctacctctgatctatcatctcctgcaaggcttcta
tctctttatggtcagttaataatccatctcctatcgcaaaacacttgatt
ttcaacctaccaggttctcgacaatgtgactcagctggttattatttcac
ccatctttgcttcttaggtatgtctgacatccatctctctgtccattgac
atttgtcttctatctactctttcgtggtcccttctcgttcttgtttgcac
aggtatacttcttttatcatttagatggtttgacccttgaatgcccctct
catctgctttcttttgttttaggaaaatttgttttcatgaatttccggtt
actgcataacaaggctgacattaccttctgctttcttctcttttcaggta
tcttggactcagggccttttagtattcatcctgaaagcctatggctctac
tgggacctcagtcttttgagatccatgaatatcagcaggcctcctttact
aatgaggaataattctgatcttctttcccagttaagacctgataatcaac
taatctaggatcaaactcaaccctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_46703706_46704827
seq2: B6Ng01-136E09.g_71_1197

seq1  GAATTCCTAACTATGGCCCTAAGCCTATCTCCCCAGGGCTGCTCACCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACTATGGCCCTAAGCCTATCTCCCCAGGGCTGCTCACCTGT  50

seq1  GCATCATATCCTAGTTGAAGATCAGGTCTGGTCTCTAACAGAAGTCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATATCCTAGTTGAAGATCAGGTCTGGTCTCTAACAGAAGTCTCTA  100

seq1  ATTTGAAGGTTAGAATCATGAAGGAGACTCCCCAGCCACAGAGTAAATCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGGTTAGAATCATGAAGGAGACTCCCCAGCCACAGAGTAAATCG  150

seq1  AGGTGGTGTCTCTCCAGATGTGCAGAGCACTGTCTTAAGTCTCTGCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTGTCTCTCCAGATGTGCAGAGCACTGTCTTAAGTCTCTGCTTAC  200

seq1  ATACTGTCCAGTGGAGTCATGGGGTTCTACGACTGAGTGATATCAATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTCCAGTGGAGTCATGGGGTTCTACGACTGAGTGATATCAATGCT  250

seq1  TTCTGGTTATCAGGTGCAGCCTTGGGTATATTGAGGATCCAGACTAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTATCAGGTGCAGCCTTGGGTATATTGAGGATCCAGACTAAGCT  300

seq1  GTTTTTTACATGTCTAAAAAGCATTTTTTTTTTTACTATGCTCAATACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTACATGTCTAAAAAGCATTTTTTTTTTTACTATGCTCAATACAA  350

seq1  GCTTAGACTGGCCTTGAAGCATTGATCTTCCTGCCTCAGCATCCAAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGACTGGCCTTGAAGCATTGATCTTCCTGCCTCAGCATCCAAAGTT  400

seq1  CTGGGAATACAGGTATTAACCACTACTGGTTAAATATTCTTAATTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATACAGGTATTAACCACTACTGGTTAAATATTCTTAATTTTATG  450

seq1  TCCCATTTTTGTTGAACACTACATTAACATTTCTCTTCCTATCAACATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTTTGTTGAACACTACATTAACATTTCTCTTCCTATCAACATTT  500

seq1  CTTGAAAAAAAACCCCCTTTTTTTTTTCACTTTATAATTGTTTTTCAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAAAAAACCCCCTTTTTTTTTTCACTTTATAATTGTTTTTCAAAC  550

seq1  AAAGGTGGGCTTCTGCTACCTCTGATCTATCATCTCCTGCAAGGCTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGGGCTTCTGCTACCTCTGATCTATCATCTCCTGCAAGGCTTCTA  600

seq1  TCTCTTTATGGTCAGTTAATAATCCATCTCCTATCGCAAAACACTTGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTATGGTCAGTTAATAATCCATCTCCTATCGCAAAACACTTGATT  650

seq1  TTCAACCTACCAGGTTCTCGACAATGTGACCCAGCTGGTTATTATTTCAC  700
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCAACCTACCAGGTTCTCGACAATGTGACTCAGCTGGTTATTATTTCAC  700

seq1  CCATCTTTGCTTCTTAGGTATGTCTGACATCCATCTCTCTGTCCATTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTGCTTCTTAGGTATGTCTGACATCCATCTCTCTGTCCATTGAC  750

seq1  ATTTGTC-TCTATCTACTCCTTCGTGGTCCCTTCTCGTTCTTGTTTGCAC  799
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTTGTCTTCTATCTACTCTTTCGTGGTCCCTTCTCGTTCTTGTTTGCAC  800

seq1  AGGTATACT--CTTTATCATTTAGAT-GCTTGACCCTTGAATG-CCCTCT  845
      |||||||||   |||||||||||||| | |||||||||||||| ||||||
seq2  AGGTATACTTCTTTTATCATTTAGATGGTTTGACCCTTGAATGCCCCTCT  850

seq1  CATCTGCTTTCTTTGTTTTTAGG-AAATTTGTTTTCATG-ATTTCC-GTT  892
      ||||||||||||||  ||||||| ||||||||||||||| |||||| |||
seq2  CATCTGCTTTCTTTTGTTTTAGGAAAATTTGTTTTCATGAATTTCCGGTT  900

seq1  ACTGCAT-ACAA-GCTGACATTACCTTCTGCTTTCCTCTCTTTTCAAGTA  940
      ||||||| |||| |||||||||||||||||||||| |||||||||| |||
seq2  ACTGCATAACAAGGCTGACATTACCTTCTGCTTTCTTCTCTTTTCAGGTA  950

seq1  TCTTGGACTCAGGGTCTTTTAGTATTTCAT-CTGAAAGCCTATGGCTTCT  989
      |||||||||||||| ||||||||| ||||| ||||||||||||||| |||
seq2  TCTTGGACTCAGGGCCTTTTAGTA-TTCATCCTGAAAGCCTATGGC-TCT  998

seq1  ACTGGGACCTCAAGTCTTTTGAGAT-CATGAATATTCAAGCAGCCCTCCT  1038
      ||||||||||| ||||||||||||| |||||||||   ||||| ||||||
seq2  ACTGGGACCTC-AGTCTTTTGAGATCCATGAATAT--CAGCAGGCCTCCT  1045

seq1  TTACT-ATGA-GCATAAATCTGATCTTCCTTTCCCCAGTTTAGAACCTGA  1086
      ||||| |||| | |||| ||||||||||  || ||||||| || ||||||
seq2  TTACTAATGAGGAATAATTCTGATCTTC--TTTCCCAGTTAAG-ACCTGA  1092

seq1  TAATCATCTAACTCATGGTCCAAACTCAACCCTCCC  1122
      |||||| |||| ||  ||  ||||||||||||||||
seq2  TAATCAACTAA-TCTAGGATCAAACTCAACCCTCCC  1127