BAC Information

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BAC

Clone NameB6Ng01-136F19
Chromosome12 (Build37)
Map Location 91,679,174 - 91,799,582
singlet/doubletdoublet
Overlap genenone
Upstream geneNrxn3, LOC100039498
Downstream geneLOC100039287, Dio2, LOC100039295, 4930544I03Rik, 4930534B04Rik, 5430427M07Rik, Tshr, Gtf2a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136F19.bB6Ng01-136F19.g
ACCDH936152DH936153
length1,0081,013
definitionDH936152|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F19, 5' end.DH936153|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,798,961 - 91,799,582)(91,679,174 - 91,680,030)
sequence
gaattctaggccagtgaggactatgtaatgaaattttatatcaaaactag
cacacaagtagaatatatcatagattattttgttactattgttgtgtcgt
tggaaattcactaaattaatttatcatttgggagcaaaaaatatttccca
tcttataatccataaagacgagaaaattttacattataaaaggcagttat
taaaagtatttttcagtttttccctaatatttaagagtacaaattgattt
ttgttttttaaacttctctaatattgcaatgtttgcttcagagaacttat
ggttgttttgatatttttttttgttttttttatgcaaaaaaaaatacact
ttccagtagatacaaaattgcatttgtttttttgtatttatttgtaatat
tgacattttttattttaaacttatcttattgcagtgtaccggcctcatag
aagaaaacacacacacacacacatacacaaacacacggtcttcattgatc
ttcattgataatacaactggatttcgagtcacccaggagacacattttgt
gagtgtaaatgagatcttgccataaaggtttaactggggagggagggtcc
accctgagtgtgcatagcaacatttcatttgctgaggtctcaggctaact
caaaagagacaaatagactaagcaccagcatccatccatccgcctgtgct
tcctgacagtggatgcaatgggaccagctgccctattctgcccccacagc
tccttcagctcttgccttcacagctttcccttatgataaacagtactctc
aaactctaagcaaaaataaacccttccttatctgctacttttgtcaggta
ctttgttgaaagaacacagctaacttagatagttttgtcctcttgccttg
acttgggctaaaccattagaaattttagccactacagattctgcaccacc
agcataaaggttgatgtaatgaaatgtaaatatgttttgctatttaattt
attttttt
gaattcatttattcttttttttttttttctggtttgtcttgctgcattag
ctaagacttacagtatgattttgaaaagcagtggtgaagaagaaaatcct
tctctggtccccagtctcagctggaaagcttcaagtgtctcatcactaaa
gacagctgttggaatcttgttgctgtgctttaacaagataagaacattcc
tttataattttttttctgagaaatttaatctttttcattcattctttgac
aggctcatacatgtagagaatttttagtcattttcacatctcacatacct
tttgctcttctgctaaagccatctgctacgcaagaaatgtctctccttct
ttcatgcaaatttttgcgtgaccaacagagtttaattagggttgcttgca
tgaacaagggtgggagattatttactggagcatagataattttcagtggc
tatccttctgaagaacatggcattccctcctccaataaccattatctgct
agtagtccctccttggggagagtagcctcctcccttccctgactacatgt
tgtcaggcccagaattgtggaggtcagctttagtgcagggaatcagaatt
gtactgcaatgagatcatttgcgcttaaatcatgagtggtttttaaattt
tctcaatttcccatttctgaatctatagacgtgatcttgtggcttttcta
ctttagcttattatgactaaacagttctcatactagatgttgagctagcc
ttgtatttaaagataacttttaatacaattatacttcattcaccaacctg
ggggtcaggattgtatatttatgactatgataaaatagcattttgcagtt
ttgtttttaatatctttatatggggcttggtgttaagagagtaatgaatt
aggaagtgtttacctggattctaaaaactggaaagaatcaaatgattctg
aaattcttactgctttagaattactgagtgaatcatatgtctagctttgg
aaggtatcattac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_91798961_91799582
seq2: B6Ng01-136F19.b_46_667 (reverse)

seq1  TGTTGCTATGCACACTCAGGGTGGACCCTCCCTCCCCAGTTAAACCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTATGCACACTCAGGGTGGACCCTCCCTCCCCAGTTAAACCTTTA  50

seq1  TGGCAAGATCTCATTTACACTCACAAAATGTGTCTCCTGGGTGACTCGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGATCTCATTTACACTCACAAAATGTGTCTCCTGGGTGACTCGAA  100

seq1  ATCCAGTTGTATTATCAATGAAGATCAATGAAGACCGTGTGTTTGTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTTGTATTATCAATGAAGATCAATGAAGACCGTGTGTTTGTGTAT  150

seq1  GTGTGTGTGTGTGTGTTTTCTTCTATGAGGCCGGTACACTGCAATAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTTTTCTTCTATGAGGCCGGTACACTGCAATAAGAT  200

seq1  AAGTTTAAAATAAAAAATGTCAATATTACAAATAAATACAAAAAAACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAAAATAAAAAATGTCAATATTACAAATAAATACAAAAAAACAAA  250

seq1  TGCAATTTTGTATCTACTGGAAAGTGTATTTTTTTTTGCATAAAAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTTTGTATCTACTGGAAAGTGTATTTTTTTTTGCATAAAAAAAAC  300

seq1  AAAAAAAAATATCAAAACAACCATAAGTTCTCTGAAGCAAACATTGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATATCAAAACAACCATAAGTTCTCTGAAGCAAACATTGCAAT  350

seq1  ATTAGAGAAGTTTAAAAAACAAAAATCAATTTGTACTCTTAAATATTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGAAGTTTAAAAAACAAAAATCAATTTGTACTCTTAAATATTAGG  400

seq1  GAAAAACTGAAAAATACTTTTAATAACTGCCTTTTATAATGTAAAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTGAAAAATACTTTTAATAACTGCCTTTTATAATGTAAAATTTT  450

seq1  CTCGTCTTTATGGATTATAAGATGGGAAATATTTTTTGCTCCCAAATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCTTTATGGATTATAAGATGGGAAATATTTTTTGCTCCCAAATGAT  500

seq1  AAATTAATTTAGTGAATTTCCAACGACACAACAATAGTAACAAAATAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATTTAGTGAATTTCCAACGACACAACAATAGTAACAAAATAATC  550

seq1  TATGATATATTCTACTTGTGTGCTAGTTTTGATATAAAATTTCATTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATATTCTACTTGTGTGCTAGTTTTGATATAAAATTTCATTACAT  600

seq1  AGTCCTCACTGGCCTAGAATTC  622
      ||||||||||||||||||||||
seq2  AGTCCTCACTGGCCTAGAATTC  622

seq1: chr12_91679174_91680030
seq2: B6Ng01-136F19.g_66_923

seq1  GAATTCATTTATTCTTTTTTTTTTTTTTCTGGTTTGTCTTGCTGCATTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATTCTTTTTTTTTTTTTTCTGGTTTGTCTTGCTGCATTAG  50

seq1  CTAAGACTTACAGTATGATTTTGAAAAGCAGTGGTGAAGAAGAAAATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACTTACAGTATGATTTTGAAAAGCAGTGGTGAAGAAGAAAATCCT  100

seq1  TCTCTGGTCCCCAGTCTCAGCTGGAAAGCTTCAAGTGTCTCATCACTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTCCCCAGTCTCAGCTGGAAAGCTTCAAGTGTCTCATCACTAAA  150

seq1  GACAGCTGTTGGAATCTTGTTGCTGTGCTTTAACAAGATAAGAACATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGTTGGAATCTTGTTGCTGTGCTTTAACAAGATAAGAACATTCC  200

seq1  TTTATAATTTTTTTTCTGAGAAATTTAATCTTTTTCATTCATTCTTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATTTTTTTTCTGAGAAATTTAATCTTTTTCATTCATTCTTTGAC  250

seq1  AGGCTCATACATGTAGAGAATTTTTAGTCATTTTCACATCTCACATACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCATACATGTAGAGAATTTTTAGTCATTTTCACATCTCACATACCT  300

seq1  TTTGCTCTTCTGCTAAAGCCATCTGCTACGCAAGAAATGTCTCTCCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTTCTGCTAAAGCCATCTGCTACGCAAGAAATGTCTCTCCTTCT  350

seq1  TTCATGCAAATTTTTGCGTGACCAACAGAGTTTAATTAGGGTTGCTTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCAAATTTTTGCGTGACCAACAGAGTTTAATTAGGGTTGCTTGCA  400

seq1  TGAACAAGGGTGGGAGATTATTTACTGGAGCATAGATAATTTTCAGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAGGGTGGGAGATTATTTACTGGAGCATAGATAATTTTCAGTGGC  450

seq1  TATCCTTCTGAAGAACATGGCATTCCCTCCTCCAATAACCATTATCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTCTGAAGAACATGGCATTCCCTCCTCCAATAACCATTATCTGCT  500

seq1  AGTAGTCCCTCCTTGGGGAGAGTAGCCTCCTCCCTTCCCTGACTACATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTCCCTCCTTGGGGAGAGTAGCCTCCTCCCTTCCCTGACTACATGT  550

seq1  TGTCAGGCCCAGAATTGTGGAGGTCAGCTTTAGTGCAGGGAATCAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGCCCAGAATTGTGGAGGTCAGCTTTAGTGCAGGGAATCAGAATT  600

seq1  GTACTGCAATGAGATCATTTGCGCTTAAATCATGAGTGGTTTTTAAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCAATGAGATCATTTGCGCTTAAATCATGAGTGGTTTTTAAATTT  650

seq1  TCTCAATTTCCCATTTCTGAATCTATAGACGTGATCTTGTGGCTTTTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTTCCCATTTCTGAATCTATAGACGTGATCTTGTGGCTTTTCTA  700

seq1  CTTTAGCTTATTATGACTAAACAGTTCTCATACTAGATGTTGAGCTAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTTATTATGACTAAACAGTTCTCATACTAGATGTTGAGCTAGCC  750

seq1  TTGTATTTAAAGATAACTTTTAATACAATTATACTTCATTCACCAACCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTAAAGATAACTTTTAATACAATTATACTTCATTCACCAACCTG  800

seq1  GGGGTCAGGATTGTATATTTATGACTATGAT-AAATAGCATTTTGCAGTT  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGGGTCAGGATTGTATATTTATGACTATGATAAAATAGCATTTTGCAGTT  850

seq1  TTGTTTTT  857
      ||||||||
seq2  TTGTTTTT  858