BAC Information

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BAC

Clone NameB6Ng01-145G02
Chromosome12 (Build37)
Map Location 39,769,451 - 39,769,979
singlet/doubletsinglet
Overlap genenone
Upstream geneDgkb, LOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145G02.bB6Ng01-145G02.g
ACCDH942799DH942800
length942315
definitionDH942799|Mus musculus domesticus DNA, BAC clone: B6Ng01-145G02, 5' end.DH942800|Mus musculus domesticus DNA, BAC clone: B6Ng01-145G02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactccacaaataaattaataaagtgaatatatgtatatatata
tatatacatatataattttaatcgtttttatctattatttggtcacaaca
ctgagagaagtaactaacacaatactgaaaagtgggaacattgttgtgat
agatatgattatgaagttcttcgaattttggaactggtttatagaagaaa
tggaaaaaaatagacttttggactagtaagtccttagaatactttaagac
agcttaatgagaaaatctaaaaagaatttagaaaaaaaaaaaaaaacaga
aggccaaggaaatcacagacatttgaaattcagcttcagaaattccagag
gagaaaaaggagtctaccaaaatctgggctggaggccattattgctatat
ttcagcaaaatatcaggcagcattctgcacgtcctgagaattttatgaag
ctgagctaaaaagacatggggtaatttgacaggggacatttcaagacagt
gtggcattcagactgggatatggctgctgttcagtgttcatctctgatca
tctacagtgaacgttgaaaaatgaaaactgcaaaatttatggaggaaagt
tgtgatagagagtttaaaatttcagacaagtaggactggagagatggctc
aggagtgaagaatactgctatctcaggagatggaatttggtttatagcac
tcaagctaggtagcttaagttgtttgtaactccagctctaggtatctgac
agtttcttatggagtcccatggccatgtccacatgtggaagattcatgaa
tacacaaagataaaaataacacacatctattaacttttatttttgagatt
ataattaaatacacttctcccttacttttttctcccccaaactctcctat
acaccccttctcttcttcaagtccatgccctcttttatatta
ctactagaggaagatatacagactgagttggctattttccatagtctggc
aggacttccagtggaggaagtggggcatcgacccacccacagaacctcca
aaccaaaattttttctacttacaggatgcacaggcataaagatagagcag
agatagaggaaacagacaaccaataattgccccaatttgatacctatccc
gtctgagagagccaatccctgacactattaatgatactcagccatgcttg
tagacaggaacctagcataactttcccctgagaggtttgatccagtaggg
gagtgggggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39769451_39769979
seq2: B6Ng01-145G02.b_47_575 (reverse)

seq1  CAGCAGCCATATCCCAGTCTGAATGCCACACTGTCTTGAAATGTCCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCATATCCCAGTCTGAATGCCACACTGTCTTGAAATGTCCCCTG  50

seq1  TCAAATTACCCCATGTCTTTTTAGCTCAGCTTCATAAAATTCTCAGGACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTACCCCATGTCTTTTTAGCTCAGCTTCATAAAATTCTCAGGACG  100

seq1  TGCAGAATGCTGCCTGATATTTTGCTGAAATATAGCAATAATGGCCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATGCTGCCTGATATTTTGCTGAAATATAGCAATAATGGCCTCCA  150

seq1  GCCCAGATTTTGGTAGACTCCTTTTTCTCCTCTGGAATTTCTGAAGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGATTTTGGTAGACTCCTTTTTCTCCTCTGGAATTTCTGAAGCTGA  200

seq1  ATTTCAAATGTCTGTGATTTCCTTGGCCTTCTGTTTTTTTTTTTTTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATGTCTGTGATTTCCTTGGCCTTCTGTTTTTTTTTTTTTTTCT  250

seq1  AAATTCTTTTTAGATTTTCTCATTAAGCTGTCTTAAAGTATTCTAAGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTTTTAGATTTTCTCATTAAGCTGTCTTAAAGTATTCTAAGGAC  300

seq1  TTACTAGTCCAAAAGTCTATTTTTTTCCATTTCTTCTATAAACCAGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGTCCAAAAGTCTATTTTTTTCCATTTCTTCTATAAACCAGTTCC  350

seq1  AAAATTCGAAGAACTTCATAATCATATCTATCACAACAATGTTCCCACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCGAAGAACTTCATAATCATATCTATCACAACAATGTTCCCACTT  400

seq1  TTCAGTATTGTGTTAGTTACTTCTCTCAGTGTTGTGACCAAATAATAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTATTGTGTTAGTTACTTCTCTCAGTGTTGTGACCAAATAATAGAT  450

seq1  AAAAACGATTAAAATTATATATGTATATATATATATATACATATATTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACGATTAAAATTATATATGTATATATATATATATACATATATTCAC  500

seq1  TTTATTAATTTATTTGTGGAGTAGAATTC  529
      |||||||||||||||||||||||||||||
seq2  TTTATTAATTTATTTGTGGAGTAGAATTC  529