BAC Information

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BAC

Clone NameB6Ng01-146L06
Chromosome12 (Build37)
Map Location 7,460,386 - 7,461,482
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042118, LOC668380
Downstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146L06.bB6Ng01-146L06.g
ACCDH943773DH943774
length8541,097
definitionDH943773|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L06, 5' end.DH943774|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtagtactccattgtgtaaatgtacc
acattttctgtatccattcttctgttgagggacatctgggttgtttgcag
ctctggctactacaaattaggctgctacaaacatggtggagcacgtgtct
ttgggtatggtagagcatctttggggtatatgtctaggagtggtatcact
tgttcttctggtggaactatttccaattttctgaggaactgccagactga
tttccagagttgttttaccagcttgcaattccaccagcagtggaggagtg
ttcctctttctccacatcctcgccagcatctgctgtcacctgagtttttg
ttcttagccattctgactgttgtgaggtggaatctcagggttgtttttat
ctgcattcccctgatgactaagggaatccatcctgtctgcagacaccaaa
cctgatattgttgctgtggccaagagacccttgctgataggagcctggtg
tggctgctccttgggaggtttagccagcaactgaacaatgcagatgtgga
tgcttggagtcaactatcaggtggagctcagggcctctggtgggggagct
ggcagaagaactggagaagctgaggggaattgcaactccatagaaagaac
aatgtcagctggtaagaccacctagtgctcccagggtctagactaccaat
caaggactgtacagggagggatccatggctccagatacataggtagcaga
ttggtggccttgtctgacatcaatgggaggaggtcccctcttcctttggt
cctgtggagttttgatgcttcagtgtatggggatgctggaggggtggggt
gggg

gaattctcccctgatctcttgaaatgtccacagtgctcagacctcctccg
catgcctatcacaacatgccaacatccacttccttcctctctttaccata
ctgtacataagtgcttttcctggacacttcctttcttggggggaggatac
aaactttgtcttctttgaattcatagttcttagaactctacctgcaaagt
cggagaaggaaggaaacagcgcatgaacaaacaagctttgatattcaaag
tcattcctgacaccacattggcaaagccaagcctgactccagggagaggg
gagaagcaatctttaatcacagggtgcctctgcaaacagctgctgttgga
gcacagagaaatactttgttctccttagtaggttaaatatgcctctccac
aaatgtgttaacctccttcctttgcttagcaaatcctcttttcatgagct
gttcaaagataaactttatccccaggttggattatcataaccttcaaatc
agtctgcctacattaagctctctcccttcttaaagagaaattacactgag
gcccaaatcaactatcattctcttcccttttatagccccaacatcctgaa
ctagtcttttataatctctcattgaaaaccagggtcgtcactaatgcttt
cttgatacccagacactttagaggtttctttctttcccttgcctgtcaat
gttggaaatctccaaactcctatgtaggttcccttctaacaccatgtgct
ctcaaattagctttgttcactttccctaacatgtgtaggcttgccataga
caaataagcactttagagctctgagcttatcagtcaggtacaggactaga
attacacattggctgtgagacagtcacttgaaagatactttgaatgccca
tagacattaaatttaatatttctttaaaaggtacccagacatcctgggga
gatgatattatctgttgtgcaagtgtaaggacgatcctcagtaagcttat
aaaacgcaggtgagtgtagtggtcagctgtaatcagcactttaaggtaga
agacagggagatccctgagtaactggttaggagtattcaaattaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7460386_7461482
seq2: B6Ng01-146L06.g_69_1165

seq1  GAATTCTCCCCTGATCTCTTGAAATGTCCACAGTGCTCAGACCTCCTCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCTGATCTCTTGAAATGTCCACAGTGCTCAGACCTCCTCCG  50

seq1  CATGCCTATCACAACATGCCAACATCCACTTCCTTCCTCTCTTTACCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTATCACAACATGCCAACATCCACTTCCTTCCTCTCTTTACCATA  100

seq1  CTGTACATAAGTGCTTTTCCTGGACACTTCCTTTCTTGAGGGGAGGATAC  150
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTGTACATAAGTGCTTTTCCTGGACACTTCCTTTCTTGGGGGGAGGATAC  150

seq1  AAACTTTGTCTTCTTTGAATTCATAGTTCTTAGAACTCTACCTGCAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGTCTTCTTTGAATTCATAGTTCTTAGAACTCTACCTGCAAAGT  200

seq1  CGGAGAAGGAAGGAAACAGCGCATGAACAAACAAGCTTTGATATTCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGAAGGAAGGAAACAGCGCATGAACAAACAAGCTTTGATATTCAAAG  250

seq1  TCATTCCTGACACCACATTGGCAAAGCCAAGCCTGACTCCAGGGAGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGACACCACATTGGCAAAGCCAAGCCTGACTCCAGGGAGAGGG  300

seq1  GAGAAGCAATCTTTAATCACAGGGTGCCTCTGCAAACAGCTGCTGTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCAATCTTTAATCACAGGGTGCCTCTGCAAACAGCTGCTGTTGGA  350

seq1  GCACAGAGAAATACTTTGTTCTCCTTAGTAGGTTAAATATGCCTCTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAGAAATACTTTGTTCTCCTTAGTAGGTTAAATATGCCTCTCCAC  400

seq1  AAATGTGTTAACCTCCTTCCTTTGCTTAGCAAATCCTCTTTTCATGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTTAACCTCCTTCCTTTGCTTAGCAAATCCTCTTTTCATGAGCT  450

seq1  GTTCAAAGATAAACTTTATCCCCAGGTTGGATTATCATAACCTTCAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAGATAAACTTTATCCCCAGGTTGGATTATCATAACCTTCAAATC  500

seq1  AGTCTGCCTACATTAAGCTCTCTCCCTTCTTAAAGAGAAATTACACTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCCTACATTAAGCTCTCTCCCTTCTTAAAGAGAAATTACACTGAG  550

seq1  GCCCAAATCAACTATCATTCTCTTCCCTTTTATAGCCCCAACATCCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAATCAACTATCATTCTCTTCCCTTTTATAGCCCCAACATCCTGAA  600

seq1  CTAGTCTTTTATAATCTCTCATTGAAAACCAGGGTCGTCACTAATGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTTTTATAATCTCTCATTGAAAACCAGGGTCGTCACTAATGCTTT  650

seq1  CTTGATACCCAGACACTTTAGAGGTTTCTTTCTTTCCCTTGCCTGTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATACCCAGACACTTTAGAGGTTTCTTTCTTTCCCTTGCCTGTCAAT  700

seq1  GTTGGAAATCTCCAAACTCCTATGTAGGTTCCCTTCTAACACCATGTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAAATCTCCAAACTCCTATGTAGGTTCCCTTCTAACACCATGTGCT  750

seq1  CTCAAATTAGC-TTGTTCAC-TTCCCTAACATGTGTAGGCTTGCCATAGA  798
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  CTCAAATTAGCTTTGTTCACTTTCCCTAACATGTGTAGGCTTGCCATAGA  800

seq1  CAAATAAGCACTTTAGAGCTCTGAGCTTATCAGTCAGGTACAGGACTAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAGCACTTTAGAGCTCTGAGCTTATCAGTCAGGTACAGGACTAGA  850

seq1  ATTACACATTGGCTGTGAGACAGTCACTTGAAAGATAC-TTGAATGCCCA  897
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTACACATTGGCTGTGAGACAGTCACTTGAAAGATACTTTGAATGCCCA  900

seq1  TAGACATTAAAATTTTAATA-TTCTTTAAAAGGTACCCAGACATCCTGGG  946
      |||||||||||  ||||||| |||||||||||||||||||||||||||||
seq2  TAGACATTAAA--TTTAATATTTCTTTAAAAGGTACCCAGACATCCTGGG  948

seq1  GAGATGATA-TATCTGTTGTGCAAGTGTAAGGACGATCCCCAGTAAGCTT  995
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  GAGATGATATTATCTGTTGTGCAAGTGTAAGGACGATCCTCAGTAAGCTT  998

seq1  ATAAAAACGCAGGTGAGTGTAGTGGTCAGCCTGTAATTCCAGCACTTATA  1045
      || |||||||||||||||||||||||||| |||||||  ||||||||  |
seq2  AT-AAAACGCAGGTGAGTGTAGTGGTCAG-CTGTAAT--CAGCACTTTAA  1044

seq1  GGTAG-AGACA-GGAGATCCCTGAAGTAAACTGGTTA-GAGTATCCAAAT  1092
      ||||| ||||| ||||||||||| ||| ||||||||| |||||| |||||
seq2  GGTAGAAGACAGGGAGATCCCTG-AGT-AACTGGTTAGGAGTATTCAAAT  1092

seq1  TAACA  1097
      |||||
seq2  TAACA  1097


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