BAC Information

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BAC

Clone NameB6Ng01-147L03
Chromosome12 (Build37)
Map Location 66,108,996 - 66,110,052
singlet/doubletsinglet
Overlap geneA430041B07Rik
Upstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28
Downstream genePrpf39, Fkbp3, Fancm, C79407, Wdr20b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147L03.bB6Ng01-147L03.g
ACCDH944500DH944501
length1,0541,265
definitionDH944500|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L03, 5' end.DH944501|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgtgtttgttcagtatcacttacacttggtaaataggact
ctcccccaatatcaatcatttttccattcagaaaaaaatgtttctttctt
tttaaaaatctccaccttctaaagccgtatttctaaatctttagtgtggg
taaaggcactgaccttccaaatgggtgacttgaattcaagaacctacatg
gtaggagacttagcaaactggtctttcatatgcaaaccatgacatgtgta
ttccatggcacacttgtgttcctctgttcccacacacaaagtaaataaat
gttaatttttaattaaggaaaaaaaataagacttagaaaatattaccagt
tattcacctggtttcttgtgagctgtcttgagcaaacttagcagcagcag
gcaataaacgatcagccatatcctttgttccagatgaaattcgctctggg
tccatacattctactacatctgccaagtgctgggctgtacatcttcttac
tgcaatgtgcagatggctacaagagaacatgattgagtgaaactaactgg
aggcatgaacaatattctaagagtacaacacctctctttcagtgaggtgt
gcttcctacaaacatatagatctgaattttaatctcatcagctggtctgc
aagttttatttttatgattcactttgaggcaggtttccactatattgctc
tgattagtcagtaccttgtgtggcaggccaggctactttctatctcagac
ctctgccttctgccacccataggctgaagaaagcatgcaatagcacacat
aaatgatcagtatctgttaatggtgagttgtgcctacttctatttaaggt
tattgtggaaaggctggtaatttgtagttttgctaactggttcgggtgga
gtagactagtgctagttcttctctctccctattcatatagggcttgttta
ctgtgtcaggatggcgggttttctcacatccgtctcttcttctgatgaaa
tgtattctttcctgtgctcacatgaatgaattttctttagtgtacagtat
tact
gaattcaatgaaaatgaaggcacaacacactcaaatttaggggacacaat
gaaagtagcattaagaggaaagtccatagcactaagcacctccataaaaa
aattagaaaattctcatatccacaatttaaaagtacacctgaaatccttt
ttcaattagaaacaaagaaaaaatataaagcatcaatgaaaccaaaagct
ggttctttgagaacatccacaaaatagataaaccattagccaaactaacc
aagagactgggagtcagtatccaaataaacaaaatcaataatgaaaaggg
cgacataacaacggacagtgagaaaattcaagaaaaaaatcattatgtct
tacttcaaaaacctgtactccacaatattagaatgccttaacaaaaatgg
acaattttcaaaacagataccacctagcaaagttaaatcaagcagggcat
ggtggcacacaccttcaatcccagcactcaggaggcagaggcaggtggat
ttctgagtttgaggccagcctggtctacaaagtgagttccaggacggtca
gggctatacagagaaaccttataaaaaaattaaaaaattaaaaagttaaa
tcaagatcaggtaaaatattttaacagtttcataacccaaagaaaaagaa
gtaatcattaaaagtttcccaacaaaaaagtttcccagggacagagggtt
tagtgcacaattctaccagactttcaaaaaaagagctaattccaatgctc
ctcaaacaattccacaagatagaaatataaggaacactgctaagctcatt
ctatgaggccaaagtcactctgatacctaaaccatacaaagactcaacaa
agaaagaaaacttcagactgatttcccttatgaacattgatgcaaacatt
ctcaataaaatactcagaggatccagcaatacctctcctgggcatatatc
cagaagatgccccaactggtaagaaggacacatgctccactatgtcatag
cagccttatttataataccagaaactggaaagaacccagatgcccctcaa
cagaggaatggatacagaaaatggtggtacatttaacaatggagtactac
ctcagctattaaaagatggatttatgaattcctagccaaatggatggacc
tggaggcactctcctgatgagttaaccattcccagaactccacaaatgga
tccctgtaagtgagtatattaggcccaaacctaggaatattccccagaga
tttgagtactccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_66108996_66110052
seq2: B6Ng01-147L03.b_51_1104 (reverse)

seq1  AGTAATACTGTACACTAAAGAAAAATCATTCATGTGAGCACAGGAAAGAA  50
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTAATACTGTACACTAAAGAAAATTCATTCATGTGAGCACAGGAAAGAA  50

seq1  TACATTTCATCAGAAGAAGAGACGGATGTGAGAAAACCCGCCATTCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TACATTTCATCAGAAGAAGAGACGGATGTGAGAAAACCCGCCA-TCCTGA  99

seq1  CACAGTAAACAAGCCCTAATATGAATAGGGAGAAGAGAAGAACTAGCACT  150
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  CACAGTAAACAAGCCCT-ATATGAATAGGGAG-AGAGAAGAACTAGCACT  147

seq1  AGTCTACTCCACCCGAACCAGTTAGCAAAACTACAAATTACCAGCCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACTCCACCCGAACCAGTTAGCAAAACTACAAATTACCAGCCTTTC  197

seq1  CACAATAACCTTAAATAGAAGTAGGCACAACTCACCATTAACAGATACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAACCTTAAATAGAAGTAGGCACAACTCACCATTAACAGATACTG  247

seq1  ATCATTTATGTGTGCTATTGCATGCTTTCTTCAGCCTATGGGTGGCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTATGTGTGCTATTGCATGCTTTCTTCAGCCTATGGGTGGCAGAA  297

seq1  GGCAGAGGTCTGAGATAGAAAGTAGCCTGGCCTGCCACACAAGGTACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGTCTGAGATAGAAAGTAGCCTGGCCTGCCACACAAGGTACTGA  347

seq1  CTAATCAGAGCAATATAGTGGAAACCTGCCTCAAAGTGAATCATAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAGAGCAATATAGTGGAAACCTGCCTCAAAGTGAATCATAAAAAT  397

seq1  AAAACTTGCAGACCAGCTGATGAGATTAAAATTCAGATCTATATGTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGCAGACCAGCTGATGAGATTAAAATTCAGATCTATATGTTTGT  447

seq1  AGGAAGCACACCTCACTGAAAGAGAGGTGTTGTACTCTTAGAATATTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCACACCTCACTGAAAGAGAGGTGTTGTACTCTTAGAATATTGTT  497

seq1  CATGCCTCCAGTTAGTTTCACTCAATCATGTTCTCTTGTAGCCATCTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTCCAGTTAGTTTCACTCAATCATGTTCTCTTGTAGCCATCTGCA  547

seq1  CATTGCAGTAAGAAGATGTACAGCCCAGCACTTGGCAGATGTAGTAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGTAAGAAGATGTACAGCCCAGCACTTGGCAGATGTAGTAGAAT  597

seq1  GTATGGACCCAGAGCGAATTTCATCTGGAACAAAGGATATGGCTGATCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGACCCAGAGCGAATTTCATCTGGAACAAAGGATATGGCTGATCGT  647

seq1  TTATTGCCTGCTGCTGCTAAGTTTGCTCAAGACAGCTCACAAGAAACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCCTGCTGCTGCTAAGTTTGCTCAAGACAGCTCACAAGAAACCAG  697

seq1  GTGAATAACTGGTAATATTTTCTAAGTCTTATTTTTTTTCCTTAATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAACTGGTAATATTTTCTAAGTCTTATTTTTTTTCCTTAATTAAA  747

seq1  AATTAACATTTATTTACTTTGTGTGTGGGAACAGAGGAACACAAGTGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACATTTATTTACTTTGTGTGTGGGAACAGAGGAACACAAGTGTGC  797

seq1  CATGGAATACACATGTCATGGTTTGCATATGAAAGACCAGTTTGCTAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATACACATGTCATGGTTTGCATATGAAAGACCAGTTTGCTAAGT  847

seq1  CTCCTACCATGTAGGTTCTTGAATTCAAGTCACCCATTTGGAAGGTCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACCATGTAGGTTCTTGAATTCAAGTCACCCATTTGGAAGGTCAGT  897

seq1  GCCTTTACCCACACTAAAGATTTAGAAATACGGCTTTAGAAGGTGGAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTACCCACACTAAAGATTTAGAAATACGGCTTTAGAAGGTGGAGAT  947

seq1  TTTTAAAAAGAAAGAAACATTTTTTTCTGAATGGAAAAATGATTGATATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAGAAAGAAACATTTTTTTCTGAATGGAAAAATGATTGATATT  997

seq1  GGGGGAGAGTCCTATTTACCAAGTGTAAGTGATACTGAACAAACACATAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGAGTCCTATTTACCAAGTGTAAGTGATACTGAACAAACACATAG  1047

seq1  TGAATTC  1057
      |||||||
seq2  TGAATTC  1054