BAC Information

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BAC

Clone NameB6Ng01-148B11
Chromosome12 (Build37)
Map Location 114,983,507 - 114,984,447
singlet/doubletsinglet
Overlap geneIgh
Upstream geneAW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22, Mta1, Crip2, Crip1, 4930427A07Rik, LOC676349, Tmem121, Igh-2, Gm900, Igh-1b, Igh-3, Ighg1, AI324046, LOC668370, LOC668375, EG382645, Igh-5, Igh-6, Ighj4, Ighj3, Ighj2, Ighj1, Ighd4-1, Ighd3-2, Ighd5-6, Ighd2-8, Ighd5-5, Ighd2-7, Ighd5-8, Ighd5-4, Ighd2-6, Ighd5-7, Ighd5-3, Ighd2-5, Ighd5-2, Ighd2-4, Ighd6-2, Ighd2-3, Ighd6-1, Ighd1-1, 4930523C11Rik, Ighd3-1, Ighd5-1, Adam6, Ighv5-1, Ighv2-1, Ighv5-2, Ighv2-2, Ighv5-3, Ighv5-4, Ighv6-1, Ighv2-3, Ighv5-5, Ighv5-6, Ankrd12-like, Ighv5-7, EG668389, Ighv5-8, Ighv5-9, Ighv5-10, Ighv2-5, Ighv5-11, Ighv5-12, Ighv2-6, Ighv5-9-1
Downstream geneEG628098, Ighv2-9-1, Ighv5-13, Ighv2-6-8, EG629785, Ighv2-7, LOC668405, Ighv5-15, Ighv5-16, Ighv5-17, Ighv5-18, Ighv2-8, Ighv2-9, Ighv5-19, Ighv7-1, Ighv7-2, Ighv14-1, Ighv4-1, Ighv3-1, Ighv11-1, Ighv14-2, Ighv4-2, Ighv3-2, Ighv11-2, Ighv14-3, EG629812, Ighv6-2, Ighv9-1, Ighv12-1, EG629818, Ighv12-2, Ighv9-3, Ighv7-3, Ighv15-1, Ighv14-4, EG668438, Ighv7-4, EG629833, EG633457, Ighv13-1, Ighv3-6, EG636260, Ighv3-7, Ighv5-21, Ighv3-8, Ighv8-1, Ighv1-1, Ighv13-2, EG435321, Ighv6-3, EG628398, EG639510, Ighv6-6, EG432701, EG629849, Ighv1-2, Ighv10-1, Ighv1-3, Ighv1-4, Ighv10-2, EG668469, EG380809, Ighv1-6, EG668474, Ighv10-4, Ighv1-8, Ighv15-2, Ighv1-9, Ighv1-10, Ighv1-11, EG629860, Ighv1-13, Ighv1-14, Ighv1-15, EG629866, Ighv1-17-1, Ighv1-17, Ighv1-18, EG668493, Ighv1-19, EG668497, Ighv1-21-1, Ighv1-21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148B11.bB6Ng01-148B11.g
ACCDH944792DH944793
length1,088943
definitionDH944792|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B11, 5' end.DH944793|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctacagttatatctgtgataatccaagctcttttagagtgggac
tgcattaggtccttttgtgatagtcaaaactgcaatgagaactgtgtcag
tgttccaagtgtcaccagttaattgcttttagatgataaccagactttgt
cctactcagagcacattccaagaggttgtaaaacagttaaccaaggtcat
agaaagggaattaatgagttattattggtgctaggacagaagataaaata
ttgagtgggtctatctatgcaaaacttcatttataatttagttatggttt
taaaccttcagtgaacctgtggagctgaggcaagatgtttagctagataa
tttactcctaatggatatgcatgtaaacattctccattgtaaacttctat
tttaaatgatgacttaattttgtgtgtaaaattttggtgaacttttaaac
atgtgatcatgtattctgaaagatgtttaagggctgaggacaaagagagg
tggcagaactgagggactggggtgagaggaactgaggtgagaagacctga
gctgggaagaattgagagggaactgagctaaggagaagtttttagacaga
acactttttagacagaactgaactccagaaaacttagaagcataggcata
gcttttagagaaaagagattgagagtaagagcattattgtgatatcacat
caggaggagagaaaacaattagaaggagaattcagagtggaataacttag
aaattataggtaatataaaatattaagagagcaaggtatagaatgcagag
ggaaagaggaaattcagaatacaatgcagagagcagaaggagcaggcatg
tttctccttagtgtgggatagaacaggtccatggtaaggacaaggaaggc
taggtcttactaaaaggaacaagctgtttctacaaacatgggtttaattc
attagcttgaaaagtggaagccctttctttctctatgcaataaagagtag
agctcattttcatccagaatgagtgagtcctatctgcaccagtgcttggt
cggtttgcctcatatgcaatagataagtaatggatgtg
gaattccaggactggtagagatccaaaatatctaggattactcagagaaa
cactgtcttgaaaataaaacttccaaaacaaataataaataaataaatac
ccaaattggagcaagtgaacctgcactaaatccatcaaaccttgcacagg
atggctgtctccctatccttaagatctaattatattaatgtcattcagaa
gacaaagattacacacaaaacaaacaaacaaaaaaaaaagcccaacaggt
aaagactccaactgtaagtaatagacccacagtctctgaggcctgcctgt
gcaggtcctcacctttggtaatcaacactgaatgcagaccactcaccatg
gactttgggctcagctttgttttccttgtcctaatgttaaaaggtaattc
ataaagataagattccgtctgttgtgtgcacatgagaaacagattttttt
gtttctctattttgttttgttttgttagtggcagtttttgcctcagaatt
ctctgtatgaaggtgcccattgtgaggtgaagctggtggagtctaaggga
ggtttagtgtagcctggaaggtccatgatactctactgtgcagcctctgg
attcactgtcagtgactactggttggctgggtttgccaggctccaaagaa
ggagctggaatgggtggggacattaatttttcatggtggtggtagcacct
cctatgcagacacctttgtaaagtgggttggacatgacatattcagaatc
aatatttagagattctaatccttgaagacatcactttcgaccaagtaata
tatgcaagatgttactgaggtttgtgggaggtttgagtatgctaggtcca
tggataggaaaaatatttaggggattttaggagtaactgtggcttgtgta
agaaggacatcactgaggggttggctctatggtcctatgttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_114983507_114984447
seq2: B6Ng01-148B11.g_70_1012 (reverse)

seq1  TGAACATAGGACCATAGAGCCAACCCCTACAGTGATGTCCTTCCTACAAC  50
      |||||||||||||||||||||||||||| |||||||||||||| ||| ||
seq2  TGAACATAGGACCATAGAGCCAACCCCT-CAGTGATGTCCTTCTTAC-AC  48

seq1  AAGCCACAGTTACTCCTAAAATCCCCT-AATATTTTTCCTATCCATGGAC  99
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAGCCACAGTTACTCCTAAAATCCCCTAAATATTTTTCCTATCCATGGAC  98

seq1  CTAGCATACTCAAACCT-CCACAAACCTCAGTAACATCTTGCATATA-TA  147
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  CTAGCATACTCAAACCTCCCACAAACCTCAGTAACATCTTGCATATATTA  148

seq1  CTTGGTCGAAAGTGATGTCTTCAAGGATTAGAATCTCTAAATATTGATTC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCGAAAGTGATGTCTTCAAGGATTAGAATCTCTAAATATTGATTC  198

seq1  TGAATATGTCATGTCCAACCCACTTTAC-AAGGTGTCTGCATAGGAGGTG  246
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGAATATGTCATGTCCAACCCACTTTACAAAGGTGTCTGCATAGGAGGTG  248

seq1  CTACCACCACCATGAAAAATTAATGTCCCCACCCATTCCAGCTCCTTCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACCACCATGAAAAATTAATGTCCCCACCCATTCCAGCTCCTTCTT  298

seq1  TGGAGCCTGGCAAACCCAGCCAACCAGTAGTCACTGACAGTGAATCCAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTGGCAAACCCAGCCAACCAGTAGTCACTGACAGTGAATCCAGA  348

seq1  GGCTGCACAGTAGAGTATCATGGACCTTCCAGGCTACACTAAACCTCCCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCACAGTAGAGTATCATGGACCTTCCAGGCTACACTAAACCTCCCT  398

seq1  TAGACTCCACCAGCTTCACCTCACAATGGGCACCTTCATACAGAGAATTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCCACCAGCTTCACCTCACAATGGGCACCTTCATACAGAGAATTC  448

seq1  TGAGGCAAAAACTGCCACTAACAAAACAAAACAAAATAGAGAAACAAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAAAAACTGCCACTAACAAAACAAAACAAAATAGAGAAACAAAAA  498

seq1  AATCTGTTTCTCATGTGCACACAACAGACGGAATCTTATCTTTATGAATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTTCTCATGTGCACACAACAGACGGAATCTTATCTTTATGAATT  548

seq1  ACCTTTTAACATTAGGACAAGGAAAACAAAGCTGAGCCCAAAGTCCATGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTAACATTAGGACAAGGAAAACAAAGCTGAGCCCAAAGTCCATGG  598

seq1  TGAGTGGTCTGCATTCAGTGTTGATTACCAAAGGTGAGGACCTGCACAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGTCTGCATTCAGTGTTGATTACCAAAGGTGAGGACCTGCACAGG  648

seq1  CAGGCCTCAGAGACTGTGGGTCTATTACTTACAGTTGGAGTCTTTACCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTCAGAGACTGTGGGTCTATTACTTACAGTTGGAGTCTTTACCTG  698

seq1  TTGGGCTTTTTTTTTTGTTTGTTTGTTTTGTGTGTAATCTTTGTCTTCTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTTTTTTTTTTGTTTGTTTGTTTTGTGTGTAATCTTTGTCTTCTG  748

seq1  AATGACATTAATATAATTAGATCTTAAGGATAGGGAGACAGCCATCCTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACATTAATATAATTAGATCTTAAGGATAGGGAGACAGCCATCCTGT  798

seq1  GCAAGGTTTGATGGATTTAGTGCAGGTTCACTTGCTCCAATTTGGGTATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTTTGATGGATTTAGTGCAGGTTCACTTGCTCCAATTTGGGTATT  848

seq1  TATTTATTTATTATTTGTTTTGGAAGTTTTATTTTCAAGACAGTGTTTCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTATTTGTTTTGGAAGTTTTATTTTCAAGACAGTGTTTCT  898

seq1  CTGAGTAATCCTAGATATTTTGGATCTCTACCAGTCCTGGAATTC  941
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAATCCTAGATATTTTGGATCTCTACCAGTCCTGGAATTC  943