BAC Information

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BAC

Clone NameB6Ng01-148O17
Chromosome12 (Build37)
Map Location 22,658,995 - 22,746,080
singlet/doubletdoublet
Overlap geneEG629133, EG668660
Upstream gene6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656
Downstream geneEG668662, LOC668664, 2410018L13Rik, LOC77114, EG668669, EG668670, LOC668680, LOC100042895, LOC100043435
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148O17.bB6Ng01-148O17.g
ACCDH945399DH945400
length550262
definitionDH945399|Mus musculus domesticus DNA, BAC clone: B6Ng01-148O17, 5' end.DH945400|Mus musculus domesticus DNA, BAC clone: B6Ng01-148O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,745,527 - 22,746,080)(22,658,995 - 22,659,261)
sequence
ttaatcacctatctgagcctcagatctcattagaggataaaaaaaaaaaa
aagacccgttttatagaattgtgtgaataaacctgatggatgagctcagc
tggggcctgatgtccagcaagcaatcgatagatgcttggcttttatcgtt
actctctgcaaagacaggcagtcctttagtacaccaggtagcaagtgggt
agaggaatgacctggtgtatggggttggggataggggtctggatccctgc
actccccatgcgccaggccctgtcaagtgcaggtacctgtactatctcca
gcatttcactgcagctgatgtaggcattgctgtctaggtcagacatgctg
aaggcccacttgagcttctgttccagcttgccccaagaggtcaggctcag
agcaataatgaacactcgggagttgatagtgctgtcgcggttgttgtcaa
aggtgtggaagacatgttcagtgaacttggaggtgtctctgtaggggaag
aagtttggcttagatcttgaaattgtccacagtcaggttggccagtggga

attgcagggacaaaaaggaagtgttcctcgctgtgagcactctggagtgt
caaatggggagccatagccatgaccgcttgtggaaagaagacagtgccat
agttactttgctattgccatggtaatacactgaccagatgagtaagtgta
tatttacagttaaaataaatgtctaagaataggcagagatggctgaagag
gtggatggagagatgactggagagatgaatggagagatgattggagagat
gaatggagagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_22745527_22746080
seq2: B6Ng01-148O17.b_49_604 (reverse)

seq1  TCCCACTGGCC-ACCTGACTGTGGACAATTTCAAGATCTAAGCC-AACTT  48
      ||||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  TCCCACTGGCCAACCTGACTGTGGACAATTTCAAGATCTAAGCCAAACTT  50

seq1  CTTCCCCTACAGAGACACCTCCAAGTTCACTGAACATGTCTTCCACACCT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTACAGAGACACCTCCAAGTTCACTGAACATGTCTTCCACACCT  100

seq1  TTGACAACAACCGCGACAGCACTATCAACTCCCGAGTGTTCATTATTGCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAACAACCGCGACAGCACTATCAACTCCCGAGTGTTCATTATTGCT  150

seq1  CTGAGCCTGACCTCTTGGGGCAAGCTGGAACAGAAGCTCAAGTGGGCCTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTGACCTCTTGGGGCAAGCTGGAACAGAAGCTCAAGTGGGCCTT  200

seq1  CAGCATGTCTGACCTAGACAGCAATGCCTACATCAGCTGCAGTGAAATGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGTCTGACCTAGACAGCAATGCCTACATCAGCTGCAGTGAAATGC  250

seq1  TGGAGATAGTACAGGTACCTGCACTTGACAGGGCCTGGCGCATGGGGAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATAGTACAGGTACCTGCACTTGACAGGGCCTGGCGCATGGGGAGT  300

seq1  GCAGGGATCCAGACCCCTATCCCCAACCCCATACACCAGGTCATTCCTCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGATCCAGACCCCTATCCCCAACCCCATACACCAGGTCATTCCTCT  350

seq1  ACCCACTTGCTACCTGGTGTACTAAAGGACTGCCTGTCTTTGCAGAGAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTTGCTACCTGGTGTACTAAAGGACTGCCTGTCTTTGCAGAGAGT  400

seq1  AACGATAAAAGCCAAGCATCTATCGATTGCTTGCTGGACATCAGGCCCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATAAAAGCCAAGCATCTATCGATTGCTTGCTGGACATCAGGCCCCA  450

seq1  GCTGAGCTCATCCATCAGGTTTATTCACACAATTCTATAAAACGGGTCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCTCATCCATCAGGTTTATTCACACAATTCTATAAAACGGGTCTT  500

seq1  TTTTTTTTTTTTATCCTCTAATGAGATCTGAGGCTCAGATAGGTGATTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTATCCTCTAATGAGATCTGAGGCTCAGATAGGTGATTAA  550

seq1  GAATTC  554
      ||||||
seq2  GAATTC  556

seq1: chr12_22658995_22659261
seq2: B6Ng01-148O17.g_67_333

seq1  AATTCATTGCAGGGACAAAAAGGAAGTGTTCCTCGCTGTGAGCACTCTGG  50
           |||||||||||||||||||||||||||||||||||||||||||||
seq2  NNNNNATTGCAGGGACAAAAAGGAAGTGTTCCTCGCTGTGAGCACTCTGG  50

seq1  AGTGTCAAATGGGGAGCCATAGCCATGACCGCTTGTGGAAAGAAGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCAAATGGGGAGCCATAGCCATGACCGCTTGTGGAAAGAAGACAGT  100

seq1  GCCATAGTTACTTTGCTATTGCCATGGTAATACACTGACCAGATGAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGTTACTTTGCTATTGCCATGGTAATACACTGACCAGATGAGTAA  150

seq1  GTGTATATTTACAGTTAAAATAAATGTCTAAGAATAGGCAGAGATGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATTTACAGTTAAAATAAATGTCTAAGAATAGGCAGAGATGGCTG  200

seq1  AAGAGGTGGATGGAGAGATGACTGGAGAGATGAATGGAGAGATGATTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTGGATGGAGAGATGACTGGAGAGATGAATGGAGAGATGATTGGA  250

seq1  GAGATGAATGGAGAGAT  267
      |||||||||||||||||
seq2  GAGATGAATGGAGAGAT  267